RNA–Protein interactions for RNA: ENST00000508685.1

SH3RF1-203, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 2,020 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-203ENST00000508685 MCHR2Q969V1 340 aa9.89□□□□□ -0.83
SH3RF1-203ENST00000508685 SEC22CQ9BRL7 303 aa9.89□□□□□ -0.83
SH3RF1-203ENST00000508685 CHIAQ9BZP6 476 aa9.89□□□□□ -0.83
SH3RF1-203ENST00000508685 CCDC86Q9H6F5 360 aaKnown RBP9.89□□□□□ -0.83
SH3RF1-203ENST00000508685 SRA1Q9HD15 236 aaKnown RBP9.89□□□□□ -0.83
SH3RF1-203ENST00000508685 RDH8Q9NYR8 311 aa9.89□□□□□ -0.83
SH3RF1-203ENST00000508685 ZNF224Q9NZL3 707 aa9.89□□□□□ -0.83
SH3RF1-203ENST00000508685 MED11Q9P086 117 aa9.89□□□□□ -0.83
SH3RF1-203ENST00000508685 GLS2Q9UI32 602 aa9.89□□□□□ -0.83
SH3RF1-203ENST00000508685 ZNF107Q9UII5 783 aaPredicted RBP9.89□□□□□ -0.83
SH3RF1-203ENST00000508685 PCDHGA5Q9Y5G8 931 aa9.89□□□□□ -0.83
SH3RF1-203ENST00000508685 HRH3Q9Y5N1 445 aa9.89□□□□□ -0.83
SH3RF1-203ENST00000508685 DMXL1Q9Y485 3027 aa9.89□□□□□ -0.83
SH3RF1-203ENST00000508685 EXPH5Q8NEV8 1989 aa9.89□□□□□ -0.83
SH3RF1-203ENST00000508685 A0A1B0GW55 424 aa9.89□□□□□ -0.83
SH3RF1-203ENST00000508685 hCG_1807616A0A1W2PRN6 198 aa9.89□□□□□ -0.83
SH3RF1-203ENST00000508685 GGT3PA6NGU5 568 aa9.89□□□□□ -0.83
SH3RF1-203ENST00000508685 PRR32B1ATL7 298 aa9.89□□□□□ -0.83
SH3RF1-203ENST00000508685 RP2O75695 350 aa9.89□□□□□ -0.83
SH3RF1-203ENST00000508685 OR2J2O76002 312 aa9.89□□□□□ -0.83
SH3RF1-203ENST00000508685 DUX4L2P0CJ85 424 aa9.89□□□□□ -0.83
SH3RF1-203ENST00000508685 DUX4L3P0CJ86 424 aa9.89□□□□□ -0.83
SH3RF1-203ENST00000508685 DUX4L4P0CJ87 422 aa9.89□□□□□ -0.83
SH3RF1-203ENST00000508685 DUX4L5P0CJ88 424 aa9.89□□□□□ -0.83
SH3RF1-203ENST00000508685 DUX4L6P0CJ89 424 aa9.89□□□□□ -0.83
SH3RF1-203ENST00000508685 DUX4L7P0CJ90 424 aa9.89□□□□□ -0.83
SH3RF1-203ENST00000508685 CSRP1P21291 193 aaKnown RBP9.89□□□□□ -0.83
SH3RF1-203ENST00000508685 S100A11P31949 105 aa9.89□□□□□ -0.83
SH3RF1-203ENST00000508685 CAPZA1P52907 286 aa9.89□□□□□ -0.83
SH3RF1-203ENST00000508685 CLDN6P56747 220 aa9.89□□□□□ -0.83
SH3RF1-203ENST00000508685 ACTBP60709 375 aa9.89□□□□□ -0.83
SH3RF1-203ENST00000508685 ACTG1P63261 375 aa9.89□□□□□ -0.83
SH3RF1-203ENST00000508685 RPL18Q07020 188 aaKnown RBP9.89□□□□□ -0.83
SH3RF1-203ENST00000508685 TRA2AQ13595 282 aaKnown RBP eCLIP9.89□□□□□ -0.83
SH3RF1-203ENST00000508685 SLC36A1Q7Z2H8 476 aa9.89□□□□□ -0.83
SH3RF1-203ENST00000508685 BPHLQ86WA6 291 aaPredicted RBP9.89□□□□□ -0.83
SH3RF1-203ENST00000508685 GPR119Q8TDV5 335 aa9.89□□□□□ -0.83
SH3RF1-203ENST00000508685 SCARB1Q8WTV0 552 aa9.89□□□□□ -0.83
SH3RF1-203ENST00000508685 MR1Q95460 341 aa9.89□□□□□ -0.83
SH3RF1-203ENST00000508685 TMEM106AQ96A25 262 aa9.89□□□□□ -0.83
SH3RF1-203ENST00000508685 ELMOD3Q96FG2 381 aa9.89□□□□□ -0.83
SH3RF1-203ENST00000508685 PPA2Q9H2U2 334 aa9.89□□□□□ -0.83
SH3RF1-203ENST00000508685 SLCO5A1Q9H2Y9 848 aa9.89□□□□□ -0.83
SH3RF1-203ENST00000508685 MYOTQ9UBF9 498 aa9.89□□□□□ -0.83
SH3RF1-203ENST00000508685 DUX4Q9UBX2 424 aa9.89□□□□□ -0.83
SH3RF1-203ENST00000508685 A0A0A6YYH2 397 aa9.88□□□□□ -0.83
SH3RF1-203ENST00000508685 PMS2P1A4D2B8 440 aa9.88□□□□□ -0.83
SH3RF1-203ENST00000508685 A6NJ64 397 aa9.88□□□□□ -0.83
SH3RF1-203ENST00000508685 KRBOX1C9JBD0 128 aa9.88□□□□□ -0.83
SH3RF1-203ENST00000508685 KLF7O75840 302 aaPredicted RBP9.88□□□□□ -0.83
SH3RF1-203ENST00000508685 CFDP00746 253 aaPredicted RBP9.88□□□□□ -0.83
SH3RF1-203ENST00000508685 MT-ATP6P00846 226 aa9.88□□□□□ -0.83
SH3RF1-203ENST00000508685 UMODP07911 640 aa9.88□□□□□ -0.83
SH3RF1-203ENST00000508685 CELA2AP08217 269 aa9.88□□□□□ -0.83
SH3RF1-203ENST00000508685 GP1BBP13224 206 aa9.88□□□□□ -0.83
SH3RF1-203ENST00000508685 PPP3CBP16298 524 aa9.88□□□□□ -0.83
SH3RF1-203ENST00000508685 ACP1P24666 158 aa9.88□□□□□ -0.83
SH3RF1-203ENST00000508685 GRPRP30550 384 aa9.88□□□□□ -0.83
SH3RF1-203ENST00000508685 PRSS3P35030 304 aa9.88□□□□□ -0.83
SH3RF1-203ENST00000508685 SOX2P48431 317 aa9.88□□□□□ -0.83
SH3RF1-203ENST00000508685 MC2RQ01718 297 aa9.88□□□□□ -0.83
SH3RF1-203ENST00000508685 PCGF3Q3KNV8 242 aa9.88□□□□□ -0.83
SH3RF1-203ENST00000508685 OR6N2Q8NGY6 317 aa9.88□□□□□ -0.83
SH3RF1-203ENST00000508685 OTOSQ8NHW6 89 aa9.88□□□□□ -0.83
SH3RF1-203ENST00000508685 ORAI1Q96D31 301 aa9.88□□□□□ -0.83
SH3RF1-203ENST00000508685 C4orf45Q96LM5 186 aa9.88□□□□□ -0.83
SH3RF1-203ENST00000508685 TSSK2Q96PF2 358 aa9.88□□□□□ -0.83
SH3RF1-203ENST00000508685 GINS4Q9BRT9 223 aa9.88□□□□□ -0.83
SH3RF1-203ENST00000508685 OR11A1Q9GZK7 315 aa9.88□□□□□ -0.83
SH3RF1-203ENST00000508685 WDR54Q9H977 334 aa9.88□□□□□ -0.83
SH3RF1-203ENST00000508685 SCPEP1Q9HB40 452 aa9.88□□□□□ -0.83
SH3RF1-203ENST00000508685 ZNF346Q9UL40 294 aaKnown RBP9.88□□□□□ -0.83
SH3RF1-203ENST00000508685 ALPK2Q86TB3 2170 aa9.88□□□□□ -0.83
SH3RF1-203ENST00000508685 LOC100289279A0A1B0GTE1 492 aa9.87□□□□□ -0.83
SH3RF1-203ENST00000508685 MEGF11A6BM72 1044 aa9.87□□□□□ -0.83
SH3RF1-203ENST00000508685 FAM171A2A8MVW0 826 aa9.87□□□□□ -0.83
SH3RF1-203ENST00000508685 H7C1C5 153 aa9.87□□□□□ -0.83
SH3RF1-203ENST00000508685 PYCARD-AS1I3L0S3 204 aa9.87□□□□□ -0.83
SH3RF1-203ENST00000508685 PSMD9O00233 223 aa9.87□□□□□ -0.83
SH3RF1-203ENST00000508685 SLC17A2O00624 439 aa9.87□□□□□ -0.83
SH3RF1-203ENST00000508685 XKRYO14609 159 aa9.87□□□□□ -0.83
SH3RF1-203ENST00000508685 SUSD5O60279 629 aa9.87□□□□□ -0.83
SH3RF1-203ENST00000508685 LRP3O75074 770 aa9.87□□□□□ -0.83
SH3RF1-203ENST00000508685 CTAG2O75638 210 aa9.87□□□□□ -0.83
SH3RF1-203ENST00000508685 AQP8O94778 261 aa9.87□□□□□ -0.83
SH3RF1-203ENST00000508685 MAS1P04201 325 aa9.87□□□□□ -0.83
SH3RF1-203ENST00000508685 KLK3P07288 261 aaPredicted RBP9.87□□□□□ -0.83
SH3RF1-203ENST00000508685 GP1BAP07359 652 aa9.87□□□□□ -0.83
SH3RF1-203ENST00000508685 CXCL2P19875 107 aa9.87□□□□□ -0.83
SH3RF1-203ENST00000508685 ANXA7P20073 488 aaKnown RBP9.87□□□□□ -0.83
SH3RF1-203ENST00000508685 ZP3P21754 424 aa9.87□□□□□ -0.83
SH3RF1-203ENST00000508685 LCN6P62502 163 aa9.87□□□□□ -0.83
SH3RF1-203ENST00000508685 RAB11BQ15907 218 aa9.87□□□□□ -0.83
SH3RF1-203ENST00000508685 MESTQ5EB52 335 aa9.87□□□□□ -0.83
SH3RF1-203ENST00000508685 GLT8D1Q68CQ7 371 aa9.87□□□□□ -0.83
SH3RF1-203ENST00000508685 KCTD18Q6PI47 426 aaPredicted RBP9.87□□□□□ -0.83
SH3RF1-203ENST00000508685 DBX2Q6ZNG2 339 aa9.87□□□□□ -0.83
SH3RF1-203ENST00000508685 OR10G3Q8NGC4 313 aa9.87□□□□□ -0.83
SH3RF1-203ENST00000508685 SLC25A36Q96CQ1 311 aa9.87□□□□□ -0.83
SH3RF1-203ENST00000508685 TSPAN32Q96QS1 320 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms