RNA–Protein interactions for RNA: ENST00000508459.5

HMGCLL1-208, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 2 BASIC

Gene HMGCLL1, Length 884 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-208ENST00000508459 CDONQ4KMG0 1287 aa12.67□□□□□ -0.38
HMGCLL1-208ENST00000508459 SFRP5Q5T4F7 317 aa12.67□□□□□ -0.38
HMGCLL1-208ENST00000508459 UBE2UQ5VVX9 321 aa12.67□□□□□ -0.38
HMGCLL1-208ENST00000508459 TMEM154Q6P9G4 183 aa12.67□□□□□ -0.38
HMGCLL1-208ENST00000508459 CCDC54Q8NEL0 328 aa12.67□□□□□ -0.38
HMGCLL1-208ENST00000508459 OR4F15Q8NGB8 312 aa12.67□□□□□ -0.38
HMGCLL1-208ENST00000508459 OR1K1Q8NGR3 316 aa12.67□□□□□ -0.38
HMGCLL1-208ENST00000508459 COG8Q96MW5 612 aa12.67□□□□□ -0.38
HMGCLL1-208ENST00000508459 RNF121Q9H920 327 aa12.67□□□□□ -0.38
HMGCLL1-208ENST00000508459 MRPL22Q9NWU5 206 aaKnown RBP12.67□□□□□ -0.38
HMGCLL1-208ENST00000508459 ERVK-18Q9QC07 812 aa12.67□□□□□ -0.38
HMGCLL1-208ENST00000508459 ASH2LQ9UBL3 628 aa12.67□□□□□ -0.38
HMGCLL1-208ENST00000508459 ZNF391Q9UJN7 358 aa12.67□□□□□ -0.38
HMGCLL1-208ENST00000508459 IKZF2Q9UKS7 526 aa12.67□□□□□ -0.38
HMGCLL1-208ENST00000508459 POLEQ07864 2286 aa12.67□□□□□ -0.38
HMGCLL1-208ENST00000508459 SHANK1Q9Y566 2161 aa12.66□□□□□ -0.38
HMGCLL1-208ENST00000508459 A0A0G2JNJ9 132 aa12.66□□□□□ -0.38
HMGCLL1-208ENST00000508459 TVP23AA6NH52 213 aa12.66□□□□□ -0.38
HMGCLL1-208ENST00000508459 FAM171A2A8MVW0 826 aa12.66□□□□□ -0.38
HMGCLL1-208ENST00000508459 A8MXE2 369 aa12.66□□□□□ -0.38
HMGCLL1-208ENST00000508459 SGCEO43556 437 aa12.66□□□□□ -0.38
HMGCLL1-208ENST00000508459 SELENOFO60613 162 aa12.66□□□□□ -0.38
HMGCLL1-208ENST00000508459 NOL3O60936 208 aaKnown RBP12.66□□□□□ -0.38
HMGCLL1-208ENST00000508459 WISP2O76076 250 aa12.66□□□□□ -0.38
HMGCLL1-208ENST00000508459 TOXO94900 526 aa12.66□□□□□ -0.38
HMGCLL1-208ENST00000508459 MT-ND2P03891 347 aa12.66□□□□□ -0.38
HMGCLL1-208ENST00000508459 MRPL3P09001 348 aaKnown RBP12.66□□□□□ -0.38
HMGCLL1-208ENST00000508459 H2BFMP0C1H6 154 aa12.66□□□□□ -0.38
HMGCLL1-208ENST00000508459 B4GALT1P15291 398 aa12.66□□□□□ -0.38
HMGCLL1-208ENST00000508459 ATP6V1B1P15313 513 aa12.66□□□□□ -0.38
HMGCLL1-208ENST00000508459 TUBG1P23258 451 aa12.66□□□□□ -0.38
HMGCLL1-208ENST00000508459 C21orf33P30042 268 aaPredicted RBP12.66□□□□□ -0.38
HMGCLL1-208ENST00000508459 NTF4P34130 210 aa12.66□□□□□ -0.38
HMGCLL1-208ENST00000508459 TGM4P49221 684 aa12.66□□□□□ -0.38
HMGCLL1-208ENST00000508459 EMX1Q04741 257 aaPredicted RBP12.66□□□□□ -0.38
HMGCLL1-208ENST00000508459 MLLT11Q13015 90 aaPredicted RBP12.66□□□□□ -0.38
HMGCLL1-208ENST00000508459 MED22Q15528 200 aa12.66□□□□□ -0.38
HMGCLL1-208ENST00000508459 ETFDHQ16134 617 aa12.66□□□□□ -0.38
HMGCLL1-208ENST00000508459 GSG1Q2KHT4 349 aa12.66□□□□□ -0.38
HMGCLL1-208ENST00000508459 FBXL19-AS1Q494R0 122 aa12.66□□□□□ -0.38
HMGCLL1-208ENST00000508459 ELFN2Q5R3F8 820 aa12.66□□□□□ -0.38
HMGCLL1-208ENST00000508459 TIMM23BQ5SRD1 257 aa12.66□□□□□ -0.38
HMGCLL1-208ENST00000508459 VWA1Q6PCB0 445 aa12.66□□□□□ -0.38
HMGCLL1-208ENST00000508459 KCTD8Q6ZWB6 473 aa12.66□□□□□ -0.38
HMGCLL1-208ENST00000508459 BHLHA15Q7RTS1 189 aaPredicted RBP12.66□□□□□ -0.38
HMGCLL1-208ENST00000508459 DCXRQ7Z4W1 244 aa12.66□□□□□ -0.38
HMGCLL1-208ENST00000508459 ZNF433Q8N7K0 673 aaPredicted RBP12.66□□□□□ -0.38
HMGCLL1-208ENST00000508459 CA5BP1Q8WTZ4 195 aa12.66□□□□□ -0.38
HMGCLL1-208ENST00000508459 RNF133Q8WVZ7 376 aa12.66□□□□□ -0.38
HMGCLL1-208ENST00000508459 HSD17B8Q92506 261 aa12.66□□□□□ -0.38
HMGCLL1-208ENST00000508459 NABP1Q96AH0 204 aa12.66□□□□□ -0.38
HMGCLL1-208ENST00000508459 COQ7Q99807 217 aa12.66□□□□□ -0.38
HMGCLL1-208ENST00000508459 ATF6BQ99941 703 aa12.66□□□□□ -0.38
HMGCLL1-208ENST00000508459 ABHD6Q9BV23 337 aa12.66□□□□□ -0.38
HMGCLL1-208ENST00000508459 ZNF416Q9BWM5 594 aa12.66□□□□□ -0.38
HMGCLL1-208ENST00000508459 TUBG2Q9NRH3 451 aa12.66□□□□□ -0.38
HMGCLL1-208ENST00000508459 DDX28Q9NUL7 540 aaKnown RBP12.66□□□□□ -0.38
HMGCLL1-208ENST00000508459 BABAM2Q9NXR7 383 aa12.66□□□□□ -0.38
HMGCLL1-208ENST00000508459 JKAMPQ9P055 326 aa12.66□□□□□ -0.38
HMGCLL1-208ENST00000508459 AASSQ9UDR5 926 aa12.66□□□□□ -0.38
HMGCLL1-208ENST00000508459 Q9UFV3 132 aa12.66□□□□□ -0.38
HMGCLL1-208ENST00000508459 SH3BGRL2Q9UJC5 107 aa12.66□□□□□ -0.38
HMGCLL1-208ENST00000508459 GDF2Q9UK05 429 aaPredicted RBP12.66□□□□□ -0.38
HMGCLL1-208ENST00000508459 ALPK2Q86TB3 2170 aa12.65□□□□□ -0.38
HMGCLL1-208ENST00000508459 C16orf97H3BN30 126 aa12.65□□□□□ -0.38
HMGCLL1-208ENST00000508459 GPRIN2O60269 458 aa12.65□□□□□ -0.38
HMGCLL1-208ENST00000508459 SERPINA3P01011 423 aa12.65□□□□□ -0.38
HMGCLL1-208ENST00000508459 IGHV3-9P01782 118 aa12.65□□□□□ -0.38
HMGCLL1-208ENST00000508459 CD1AP06126 327 aa12.65□□□□□ -0.38
HMGCLL1-208ENST00000508459 LIMS3P0CW19 117 aa12.65□□□□□ -0.38
HMGCLL1-208ENST00000508459 LIMS4P0CW20 117 aa12.65□□□□□ -0.38
HMGCLL1-208ENST00000508459 CD79BP40259 229 aa12.65□□□□□ -0.38
HMGCLL1-208ENST00000508459 RANBP1P43487 201 aa12.65□□□□□ -0.38
HMGCLL1-208ENST00000508459 RGS6P49758 472 aa12.65□□□□□ -0.38
HMGCLL1-208ENST00000508459 TPTEP56180 551 aa12.65□□□□□ -0.38
HMGCLL1-208ENST00000508459 HIST1H3AP68431 136 aa12.65□□□□□ -0.38
HMGCLL1-208ENST00000508459 SORDQ00796 357 aa12.65□□□□□ -0.38
HMGCLL1-208ENST00000508459 FOXF2Q12947 444 aa12.65□□□□□ -0.38
HMGCLL1-208ENST00000508459 PHYHD1Q5SRE7 291 aa12.65□□□□□ -0.38
HMGCLL1-208ENST00000508459 HIST2H3PS2Q5TEC6 136 aa12.65□□□□□ -0.38
HMGCLL1-208ENST00000508459 RPL22L1Q6P5R6 122 aaKnown RBP12.65□□□□□ -0.38
HMGCLL1-208ENST00000508459 HIST2H3AQ71DI3 136 aa12.65□□□□□ -0.38
HMGCLL1-208ENST00000508459 LHFPL3Q86UP9 236 aa12.65□□□□□ -0.38
HMGCLL1-208ENST00000508459 MS4A15Q8N5U1 240 aa12.65□□□□□ -0.38
HMGCLL1-208ENST00000508459 YIPF7Q8N8F6 280 aa12.65□□□□□ -0.38
HMGCLL1-208ENST00000508459 ZNF610Q8N9Z0 462 aa12.65□□□□□ -0.38
HMGCLL1-208ENST00000508459 BCL2L2Q92843 193 aaPredicted RBP12.65□□□□□ -0.38
HMGCLL1-208ENST00000508459 UFD1Q92890 307 aa12.65□□□□□ -0.38
HMGCLL1-208ENST00000508459 SLAMF6Q96DU3 332 aa12.65□□□□□ -0.38
HMGCLL1-208ENST00000508459 OR8B4Q96RC9 309 aa12.65□□□□□ -0.38
HMGCLL1-208ENST00000508459 KCNJ16Q9NPI9 418 aa12.65□□□□□ -0.38
HMGCLL1-208ENST00000508459 PAK1IP1Q9NWT1 392 aaPredicted RBP12.65□□□□□ -0.38
HMGCLL1-208ENST00000508459 PLEK2Q9NYT0 353 aa12.65□□□□□ -0.38
HMGCLL1-208ENST00000508459 PRSS50Q9UI38 385 aa12.65□□□□□ -0.38
HMGCLL1-208ENST00000508459 GNG8Q9UK08 70 aa12.65□□□□□ -0.38
HMGCLL1-208ENST00000508459 SLC5A6Q9Y289 635 aa12.65□□□□□ -0.38
HMGCLL1-208ENST00000508459 OR5H1A6NKK0 313 aa12.64□□□□□ -0.39
HMGCLL1-208ENST00000508459 SCG5P05408 212 aa12.64□□□□□ -0.39
HMGCLL1-208ENST00000508459 ITGA5P08648 1049 aa12.64□□□□□ -0.39
HMGCLL1-208ENST00000508459 ZNF12P17014 697 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms