RNA–Protein interactions for RNA: ENST00000507449.1

LSM6-205, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM6, Length 371 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-205ENST00000507449 CCDC59Q9P031 241 aaKnown RBP2.06□□□□□ -2.08
LSM6-205ENST00000507449 UVRAGQ9P2Y5 699 aa2.06□□□□□ -2.08
LSM6-205ENST00000507449 ZNF222Q9UK12 451 aa2.06□□□□□ -2.08
LSM6-205ENST00000507449 TMED5Q9Y3A6 229 aa2.06□□□□□ -2.08
LSM6-205ENST00000507449 PHLPP2Q6ZVD8 1323 aa2.06□□□□□ -2.08
LSM6-205ENST00000507449 IGSF9BQ9UPX0 1349 aa2.06□□□□□ -2.08
LSM6-205ENST00000507449 ARID1AO14497 2285 aa2.05□□□□□ -2.08
LSM6-205ENST00000507449 IGKV6D-21A0A0A0MT36 114 aa2.05□□□□□ -2.08
LSM6-205ENST00000507449 IGHV5-10-1A0A0J9YXX1 117 aa2.05□□□□□ -2.08
LSM6-205ENST00000507449 LYRM9A8MSI8 78 aa2.05□□□□□ -2.08
LSM6-205ENST00000507449 AIREO43918 545 aa2.05□□□□□ -2.08
LSM6-205ENST00000507449 HUS1O60921 280 aa2.05□□□□□ -2.08
LSM6-205ENST00000507449 FKBP6O75344 327 aa2.05□□□□□ -2.08
LSM6-205ENST00000507449 SPAG7O75391 227 aa2.05□□□□□ -2.08
LSM6-205ENST00000507449 FLOT1O75955 427 aa2.05□□□□□ -2.08
LSM6-205ENST00000507449 AQP8O94778 261 aa2.05□□□□□ -2.08
LSM6-205ENST00000507449 OXTP01178 125 aa2.05□□□□□ -2.08
LSM6-205ENST00000507449 ERCC1P07992 297 aaPredicted RBP2.05□□□□□ -2.08
LSM6-205ENST00000507449 OR8G3PP0DMU2 310 aa2.05□□□□□ -2.08
LSM6-205ENST00000507449 IGHV1-8P0DP01 117 aa2.05□□□□□ -2.08
LSM6-205ENST00000507449 MYL2P10916 166 aa2.05□□□□□ -2.08
LSM6-205ENST00000507449 CCNB1P14635 433 aa2.05□□□□□ -2.08
LSM6-205ENST00000507449 IGFBP3P17936 291 aaPredicted RBP2.05□□□□□ -2.08
LSM6-205ENST00000507449 PGAM1P18669 254 aa2.05□□□□□ -2.08
LSM6-205ENST00000507449 RAB3BP20337 219 aa2.05□□□□□ -2.08
LSM6-205ENST00000507449 CEACAM3P40198 252 aa2.05□□□□□ -2.08
LSM6-205ENST00000507449 NAMPTP43490 491 aa2.05□□□□□ -2.08
LSM6-205ENST00000507449 LINC00315P59091 139 aa2.05□□□□□ -2.08
LSM6-205ENST00000507449 EIF3EP60228 445 aaKnown RBP2.05□□□□□ -2.08
LSM6-205ENST00000507449 KRTAP10-1P60331 282 aa2.05□□□□□ -2.08
LSM6-205ENST00000507449 STXBP1P61764 594 aaKnown RBP2.05□□□□□ -2.08
LSM6-205ENST00000507449 PRR3P79522 188 aaKnown RBP2.05□□□□□ -2.08
LSM6-205ENST00000507449 SYCNQ0VAF6 134 aa2.05□□□□□ -2.08
LSM6-205ENST00000507449 ITIH4Q14624 930 aa2.05□□□□□ -2.08
LSM6-205ENST00000507449 GINS1Q14691 196 aa2.05□□□□□ -2.08
LSM6-205ENST00000507449 SF3A2Q15428 464 aaKnown RBP2.05□□□□□ -2.08
LSM6-205ENST00000507449 TMEM53Q6P2H8 277 aa2.05□□□□□ -2.08
LSM6-205ENST00000507449 CENPQQ7L2Z9 268 aaPredicted RBP2.05□□□□□ -2.08
LSM6-205ENST00000507449 LUZP2Q86TE4 346 aa2.05□□□□□ -2.08
LSM6-205ENST00000507449 CBLN2Q8IUK8 224 aa2.05□□□□□ -2.08
LSM6-205ENST00000507449 PGAM4Q8N0Y7 254 aa2.05□□□□□ -2.08
LSM6-205ENST00000507449 OR5W2Q8NH69 310 aa2.05□□□□□ -2.08
LSM6-205ENST00000507449 ABHD3Q8WU67 409 aa2.05□□□□□ -2.08
LSM6-205ENST00000507449 C8orf44Q96CB5 159 aa2.05□□□□□ -2.08
LSM6-205ENST00000507449 ECHDC3Q96DC8 303 aa2.05□□□□□ -2.08
LSM6-205ENST00000507449 ANKRD60Q9BZ19 345 aa2.05□□□□□ -2.08
LSM6-205ENST00000507449 EXO5Q9H790 373 aa2.05□□□□□ -2.08
LSM6-205ENST00000507449 ZNF430Q9H8G1 570 aaPredicted RBP2.05□□□□□ -2.08
LSM6-205ENST00000507449 BEX1Q9HBH7 125 aa2.05□□□□□ -2.08
LSM6-205ENST00000507449 OR12D3Q9UGF7 316 aa2.05□□□□□ -2.08
LSM6-205ENST00000507449 PRO0461Q9UI25 63 aa2.05□□□□□ -2.08
LSM6-205ENST00000507449 GAKO14976 1311 aa2.05□□□□□ -2.08
LSM6-205ENST00000507449 MROH7-TTC4A0A0A0MT08 1334 aa2.04□□□□□ -2.08
LSM6-205ENST00000507449 L7N2F9 121 aa2.04□□□□□ -2.08
LSM6-205ENST00000507449 CD160O95971 181 aa2.04□□□□□ -2.08
LSM6-205ENST00000507449 IGKV3-11P04433 115 aa2.04□□□□□ -2.08
LSM6-205ENST00000507449 HLA-DPB1P04440 258 aa2.04□□□□□ -2.08
LSM6-205ENST00000507449 ARG1P05089 322 aa2.04□□□□□ -2.08
LSM6-205ENST00000507449 EIF4EP06730 217 aaKnown RBP2.04□□□□□ -2.08
LSM6-205ENST00000507449 CT45A6P0DMU7 189 aa2.04□□□□□ -2.08
LSM6-205ENST00000507449 CT45A5P0DMU8 189 aa2.04□□□□□ -2.08
LSM6-205ENST00000507449 CT45A7P0DMV0 189 aa2.04□□□□□ -2.08
LSM6-205ENST00000507449 SFTPCP11686 197 aa2.04□□□□□ -2.08
LSM6-205ENST00000507449 ANXA8P13928 327 aa2.04□□□□□ -2.08
LSM6-205ENST00000507449 CTRB1P17538 263 aa2.04□□□□□ -2.08
LSM6-205ENST00000507449 ATF6P18850 670 aa2.04□□□□□ -2.08
LSM6-205ENST00000507449 GGT1P19440 569 aa2.04□□□□□ -2.08
LSM6-205ENST00000507449 F2RP25116 425 aa2.04□□□□□ -2.08
LSM6-205ENST00000507449 RPS5P46782 204 aaKnown RBP2.04□□□□□ -2.08
LSM6-205ENST00000507449 UQCRFS1P47985 274 aa2.04□□□□□ -2.08
LSM6-205ENST00000507449 ATP5OP48047 213 aa2.04□□□□□ -2.08
LSM6-205ENST00000507449 MRPL19P49406 292 aaKnown RBP2.04□□□□□ -2.08
LSM6-205ENST00000507449 RAB9AP51151 201 aa2.04□□□□□ -2.08
LSM6-205ENST00000507449 PFN3P60673 137 aa2.04□□□□□ -2.08
LSM6-205ENST00000507449 ESRRGP62508 458 aa2.04□□□□□ -2.08
LSM6-205ENST00000507449 RAP1AP62834 184 aa2.04□□□□□ -2.08
LSM6-205ENST00000507449 IRF8Q02556 426 aa2.04□□□□□ -2.08
LSM6-205ENST00000507449 TCP10Q12799 353 aa2.04□□□□□ -2.08
LSM6-205ENST00000507449 TRAM2Q15035 370 aa2.04□□□□□ -2.08
LSM6-205ENST00000507449 PGGHGQ32M88 737 aa2.04□□□□□ -2.08
LSM6-205ENST00000507449 LINC00483Q53H64 154 aa2.04□□□□□ -2.08
LSM6-205ENST00000507449 CT45A1Q5HYN5 189 aa2.04□□□□□ -2.08
LSM6-205ENST00000507449 ANXA8L1Q5VT79 327 aa2.04□□□□□ -2.08
LSM6-205ENST00000507449 UBE2UQ5VVX9 321 aa2.04□□□□□ -2.08
LSM6-205ENST00000507449 GPR107Q5VW38 600 aa2.04□□□□□ -2.08
LSM6-205ENST00000507449 METTL21CQ5VZV1 264 aa2.04□□□□□ -2.08
LSM6-205ENST00000507449 Q5W150 140 aa2.04□□□□□ -2.08
LSM6-205ENST00000507449 CLEC2AQ6UVW9 174 aa2.04□□□□□ -2.08
LSM6-205ENST00000507449 EIF3MQ7L2H7 374 aaKnown RBP2.04□□□□□ -2.08
LSM6-205ENST00000507449 CMC1Q7Z7K0 106 aa2.04□□□□□ -2.08
LSM6-205ENST00000507449 GABRG1Q8N1C3 465 aa2.04□□□□□ -2.08
LSM6-205ENST00000507449 NPWQ8N729 165 aa2.04□□□□□ -2.08
LSM6-205ENST00000507449 C11orf72Q8NBR9 251 aa2.04□□□□□ -2.08
LSM6-205ENST00000507449 OR52K2Q8NGK3 314 aa2.04□□□□□ -2.08
LSM6-205ENST00000507449 OR9G4Q8NGQ1 327 aa2.04□□□□□ -2.08
LSM6-205ENST00000507449 OR52E5Q8NH55 327 aa2.04□□□□□ -2.08
LSM6-205ENST00000507449 OR5K2Q8NHB8 316 aa2.04□□□□□ -2.08
LSM6-205ENST00000507449 CT45A3Q8NHU0 189 aa2.04□□□□□ -2.08
LSM6-205ENST00000507449 EEF1AKMT3Q96AZ1 226 aa2.04□□□□□ -2.08
LSM6-205ENST00000507449 NEURL3Q96EH8 262 aa2.04□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms