RNA–Protein interactions for RNA: ENST00000506880.5

PDGFC-205, Transcript of platelet derived growth factor C, humanhuman

TSL 2

Gene PDGFC, Length 1,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-205ENST00000506880 LINC01560Q8TB33 94 aa7.36□□□□□ -1.23
PDGFC-205ENST00000506880 PTP4A1Q93096 173 aa7.36□□□□□ -1.23
PDGFC-205ENST00000506880 FBXW5Q969U6 566 aa7.36□□□□□ -1.23
PDGFC-205ENST00000506880 SPTSSAQ969W0 71 aa7.36□□□□□ -1.23
PDGFC-205ENST00000506880 ZNF837Q96EG3 531 aaPredicted RBP7.36□□□□□ -1.23
PDGFC-205ENST00000506880 PLPPR2Q96GM1 343 aa7.36□□□□□ -1.23
PDGFC-205ENST00000506880 INTS14Q96SY0 518 aa7.36□□□□□ -1.23
PDGFC-205ENST00000506880 DHRS9Q9BPW9 319 aa7.36□□□□□ -1.23
PDGFC-205ENST00000506880 ZNF416Q9BWM5 594 aa7.36□□□□□ -1.23
PDGFC-205ENST00000506880 OR2H1Q9GZK4 316 aa7.36□□□□□ -1.23
PDGFC-205ENST00000506880 CLEC4MQ9H2X3 399 aaPredicted RBP7.36□□□□□ -1.23
PDGFC-205ENST00000506880 RNF121Q9H920 327 aa7.36□□□□□ -1.23
PDGFC-205ENST00000506880 SEC61A2Q9H9S3 476 aa7.36□□□□□ -1.23
PDGFC-205ENST00000506880 MRPS18AQ9NVS2 196 aaKnown RBP7.36□□□□□ -1.23
PDGFC-205ENST00000506880 ZNF224Q9NZL3 707 aa7.36□□□□□ -1.23
PDGFC-205ENST00000506880 COA3Q9Y2R0 106 aaPredicted RBP7.36□□□□□ -1.23
PDGFC-205ENST00000506880 POLR1DQ9Y2S0 133 aa7.36□□□□□ -1.23
PDGFC-205ENST00000506880 UTP20O75691 2785 aaKnown RBP7.36□□□□□ -1.23
PDGFC-205ENST00000506880 TACC2O95359 2948 aa7.35□□□□□ -1.23
PDGFC-205ENST00000506880 CREBBPQ92793 2442 aa7.35□□□□□ -1.23
PDGFC-205ENST00000506880 IGHV1-18A0A0C4DH31 117 aa7.35□□□□□ -1.23
PDGFC-205ENST00000506880 A0A1W2PPL8 197 aa7.35□□□□□ -1.23
PDGFC-205ENST00000506880 A1L4Q6 167 aa7.35□□□□□ -1.23
PDGFC-205ENST00000506880 ERICH4A6NGS2 130 aa7.35□□□□□ -1.23
PDGFC-205ENST00000506880 ZNF878C9JN71 531 aa7.35□□□□□ -1.23
PDGFC-205ENST00000506880 OR2T7P0C7T2 308 aa7.35□□□□□ -1.23
PDGFC-205ENST00000506880 CECR9P0C854 216 aa7.35□□□□□ -1.23
PDGFC-205ENST00000506880 CD79AP11912 226 aa7.35□□□□□ -1.23
PDGFC-205ENST00000506880 NR4A1P22736 598 aa7.35□□□□□ -1.23
PDGFC-205ENST00000506880 STOMP27105 288 aa7.35□□□□□ -1.23
PDGFC-205ENST00000506880 APOBEC3AP31941 199 aaPredicted RBP7.35□□□□□ -1.23
PDGFC-205ENST00000506880 GDI2P50395 445 aaKnown RBP7.35□□□□□ -1.23
PDGFC-205ENST00000506880 CXCR4P61073 352 aa7.35□□□□□ -1.23
PDGFC-205ENST00000506880 ADAM8P78325 824 aa7.35□□□□□ -1.23
PDGFC-205ENST00000506880 NKX6-1P78426 367 aaPredicted RBP7.35□□□□□ -1.23
PDGFC-205ENST00000506880 FMODQ06828 376 aa7.35□□□□□ -1.23
PDGFC-205ENST00000506880 EGR3Q06889 387 aa7.35□□□□□ -1.23
PDGFC-205ENST00000506880 BSPH1Q075Z2 132 aa7.35□□□□□ -1.23
PDGFC-205ENST00000506880 FOXD4Q12950 439 aaPredicted RBP7.35□□□□□ -1.23
PDGFC-205ENST00000506880 MED21Q13503 144 aa7.35□□□□□ -1.23
PDGFC-205ENST00000506880 ENDOGQ14249 297 aaKnown RBP7.35□□□□□ -1.23
PDGFC-205ENST00000506880 KRTAP27-1Q3LI81 207 aa7.35□□□□□ -1.23
PDGFC-205ENST00000506880 ZMAT1Q5H9K5 638 aa7.35□□□□□ -1.23
PDGFC-205ENST00000506880 ELFN2Q5R3F8 820 aa7.35□□□□□ -1.23
PDGFC-205ENST00000506880 SLC35F1Q5T1Q4 408 aa7.35□□□□□ -1.23
PDGFC-205ENST00000506880 AADACL4Q5VUY2 407 aa7.35□□□□□ -1.23
PDGFC-205ENST00000506880 AGAP6Q5VW22 663 aa7.35□□□□□ -1.23
PDGFC-205ENST00000506880 FBXW10Q5XX13 1052 aa7.35□□□□□ -1.23
PDGFC-205ENST00000506880 SLC18B1Q6NT16 456 aa7.35□□□□□ -1.23
PDGFC-205ENST00000506880 DRAM2Q6UX65 266 aa7.35□□□□□ -1.23
PDGFC-205ENST00000506880 ZNF704Q6ZNC4 412 aaPredicted RBP7.35□□□□□ -1.23
PDGFC-205ENST00000506880 SLC16A9Q7RTY1 509 aa7.35□□□□□ -1.23
PDGFC-205ENST00000506880 MDP1Q86V88 176 aa7.35□□□□□ -1.23
PDGFC-205ENST00000506880 SLC30A7Q8NEW0 376 aa7.35□□□□□ -1.23
PDGFC-205ENST00000506880 OR2T27Q8NH04 317 aa7.35□□□□□ -1.23
PDGFC-205ENST00000506880 OTOSQ8NHW6 89 aa7.35□□□□□ -1.23
PDGFC-205ENST00000506880 C11orf40Q8WZ69 217 aa7.35□□□□□ -1.23
PDGFC-205ENST00000506880 NSMAFQ92636 917 aa7.35□□□□□ -1.23
PDGFC-205ENST00000506880 IL4I1Q96RQ9 567 aa7.35□□□□□ -1.23
PDGFC-205ENST00000506880 TEAD3Q99594 435 aa7.35□□□□□ -1.23
PDGFC-205ENST00000506880 JAM3Q9BX67 310 aa7.35□□□□□ -1.23
PDGFC-205ENST00000506880 RGCCQ9H4X1 137 aa7.35□□□□□ -1.23
PDGFC-205ENST00000506880 CXorf56Q9H5V9 222 aa7.35□□□□□ -1.23
PDGFC-205ENST00000506880 WDR76Q9H967 626 aa7.35□□□□□ -1.23
PDGFC-205ENST00000506880 CDH20Q9HBT6 801 aa7.35□□□□□ -1.23
PDGFC-205ENST00000506880 MYOZ1Q9NP98 299 aaPredicted RBP7.35□□□□□ -1.23
PDGFC-205ENST00000506880 CYSLTR2Q9NS75 346 aa7.35□□□□□ -1.23
PDGFC-205ENST00000506880 BEX4Q9NWD9 120 aaPredicted RBP7.35□□□□□ -1.23
PDGFC-205ENST00000506880 FAM118AQ9NWS6 357 aa7.35□□□□□ -1.23
PDGFC-205ENST00000506880 CLN6Q9NWW5 311 aa7.35□□□□□ -1.23
PDGFC-205ENST00000506880 SLCO1C1Q9NYB5 712 aa7.35□□□□□ -1.23
PDGFC-205ENST00000506880 PLEK2Q9NYT0 353 aa7.35□□□□□ -1.23
PDGFC-205ENST00000506880 TVP23BQ9NYZ1 205 aa7.35□□□□□ -1.23
PDGFC-205ENST00000506880 IL20RAQ9UHF4 553 aa7.35□□□□□ -1.23
PDGFC-205ENST00000506880 GMPPBQ9Y5P6 360 aa7.35□□□□□ -1.23
PDGFC-205ENST00000506880 COMMD3-BMI1R4GMX3 469 aa7.35□□□□□ -1.23
PDGFC-205ENST00000506880 A0A096LPE4 126 aa7.34□□□□□ -1.23
PDGFC-205ENST00000506880 IGKV1D-43A0A0B4J1Z2 117 aa7.34□□□□□ -1.23
PDGFC-205ENST00000506880 IGHV2OR16-5A0A0B4J2B6 119 aa7.34□□□□□ -1.23
PDGFC-205ENST00000506880 A0A1W2PPZ6 126 aa7.34□□□□□ -1.23
PDGFC-205ENST00000506880 DPRXA6NFQ7 191 aa7.34□□□□□ -1.23
PDGFC-205ENST00000506880 SHISA9B4DS77 424 aa7.34□□□□□ -1.23
PDGFC-205ENST00000506880 B9A039 149 aa7.34□□□□□ -1.23
PDGFC-205ENST00000506880 ABCD4O14678 606 aa7.34□□□□□ -1.23
PDGFC-205ENST00000506880 SYNGR3O43761 229 aa7.34□□□□□ -1.23
PDGFC-205ENST00000506880 TLX2O43763 284 aaPredicted RBP7.34□□□□□ -1.23
PDGFC-205ENST00000506880 DOK2O60496 412 aa7.34□□□□□ -1.23
PDGFC-205ENST00000506880 SULT1C4O75897 302 aa7.34□□□□□ -1.23
PDGFC-205ENST00000506880 HLA-HP01893 362 aa7.34□□□□□ -1.23
PDGFC-205ENST00000506880 HLA-DQA2P01906 255 aa7.34□□□□□ -1.23
PDGFC-205ENST00000506880 MT-ND5P03915 603 aa7.34□□□□□ -1.23
PDGFC-205ENST00000506880 ERCC1P07992 297 aaPredicted RBP7.34□□□□□ -1.23
PDGFC-205ENST00000506880 ATP6V1B1P15313 513 aa7.34□□□□□ -1.23
PDGFC-205ENST00000506880 SELEP16581 610 aa7.34□□□□□ -1.23
PDGFC-205ENST00000506880 ZNF32P17041 273 aa7.34□□□□□ -1.23
PDGFC-205ENST00000506880 CAPGP40121 348 aa7.34□□□□□ -1.23
PDGFC-205ENST00000506880 FOXG1P55316 489 aaPredicted RBP7.34□□□□□ -1.23
PDGFC-205ENST00000506880 TPTEP56180 551 aa7.34□□□□□ -1.23
PDGFC-205ENST00000506880 PSG4Q00888 419 aa7.34□□□□□ -1.23
PDGFC-205ENST00000506880 ROM1Q03395 351 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms