RNA–Protein interactions for RNA: ENST00000506575.1

CLDND1-211, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 414 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-211ENST00000506575 GIFP27352 417 aa13.34□□□□□ -0.27
CLDND1-211ENST00000506575 HTR5AP47898 357 aa13.34□□□□□ -0.27
CLDND1-211ENST00000506575 GZMKP49863 264 aa13.34□□□□□ -0.27
CLDND1-211ENST00000506575 HMGA2P52926 109 aa13.34□□□□□ -0.27
CLDND1-211ENST00000506575 LSM6P62312 80 aaKnown RBP13.34□□□□□ -0.27
CLDND1-211ENST00000506575 MS4A2Q01362 244 aa13.34□□□□□ -0.27
CLDND1-211ENST00000506575 SPATA46Q5T0L3 261 aa13.34□□□□□ -0.27
CLDND1-211ENST00000506575 C6orf52Q5T4I8 152 aa13.34□□□□□ -0.27
CLDND1-211ENST00000506575 RPL13AP3Q6NVV1 102 aa13.34□□□□□ -0.27
CLDND1-211ENST00000506575 PGM2L1Q6PCE3 622 aa13.34□□□□□ -0.27
CLDND1-211ENST00000506575 ZNF620Q6ZNG0 422 aa13.34□□□□□ -0.27
CLDND1-211ENST00000506575 OR9Q2Q8NGE9 314 aa13.34□□□□□ -0.27
CLDND1-211ENST00000506575 OR4K13Q8NH42 304 aa13.34□□□□□ -0.27
CLDND1-211ENST00000506575 ABHD4Q8TB40 342 aa13.34□□□□□ -0.27
CLDND1-211ENST00000506575 C4orf45Q96LM5 186 aa13.34□□□□□ -0.27
CLDND1-211ENST00000506575 THTPAQ9BU02 230 aa13.34□□□□□ -0.27
CLDND1-211ENST00000506575 REEP1Q9H902 201 aa13.34□□□□□ -0.27
CLDND1-211ENST00000506575 PLEK2Q9NYT0 353 aa13.34□□□□□ -0.27
CLDND1-211ENST00000506575 ASH2LQ9UBL3 628 aa13.34□□□□□ -0.27
CLDND1-211ENST00000506575 IGHV4-61A0A0C4DH41 118 aa13.33□□□□□ -0.28
CLDND1-211ENST00000506575 C17orf100A8MU93 164 aa13.33□□□□□ -0.28
CLDND1-211ENST00000506575 LYNX1G3V0Z9 82 aa13.33□□□□□ -0.28
CLDND1-211ENST00000506575 MPZL1O95297 269 aa13.33□□□□□ -0.28
CLDND1-211ENST00000506575 ABHD16AO95870 558 aa13.33□□□□□ -0.28
CLDND1-211ENST00000506575 IGHV3-13P01766 116 aa13.33□□□□□ -0.28
CLDND1-211ENST00000506575 HPXP02790 462 aa13.33□□□□□ -0.28
CLDND1-211ENST00000506575 IGHV4-31P0DP07 118 aa13.33□□□□□ -0.28
CLDND1-211ENST00000506575 LYNX1P0DP58 116 aa13.33□□□□□ -0.28
CLDND1-211ENST00000506575 HIST1H1CP16403 213 aaKnown RBP13.33□□□□□ -0.28
CLDND1-211ENST00000506575 ZNF23P17027 643 aa13.33□□□□□ -0.28
CLDND1-211ENST00000506575 CHN2P52757 468 aa13.33□□□□□ -0.28
CLDND1-211ENST00000506575 PPP1CBP62140 327 aa13.33□□□□□ -0.28
CLDND1-211ENST00000506575 GLO1Q04760 184 aa13.33□□□□□ -0.28
CLDND1-211ENST00000506575 PCGF3Q3KNV8 242 aa13.33□□□□□ -0.28
CLDND1-211ENST00000506575 OR2T5Q6IEZ7 315 aa13.33□□□□□ -0.28
CLDND1-211ENST00000506575 OR2T29Q8NH02 315 aa13.33□□□□□ -0.28
CLDND1-211ENST00000506575 SLC25A40Q8TBP6 338 aa13.33□□□□□ -0.28
CLDND1-211ENST00000506575 RDH5Q92781 318 aa13.33□□□□□ -0.28
CLDND1-211ENST00000506575 CLPTM1LQ96KA5 538 aa13.33□□□□□ -0.28
CLDND1-211ENST00000506575 TSSK2Q96PF2 358 aa13.33□□□□□ -0.28
CLDND1-211ENST00000506575 SNX18Q96RF0 628 aa13.33□□□□□ -0.28
CLDND1-211ENST00000506575 NMNAT3Q96T66 252 aa13.33□□□□□ -0.28
CLDND1-211ENST00000506575 BTBD10Q9BSF8 475 aa13.33□□□□□ -0.28
CLDND1-211ENST00000506575 OR2J1Q9GZK6 312 aa13.33□□□□□ -0.28
CLDND1-211ENST00000506575 CHODLQ9H9P2 273 aa13.33□□□□□ -0.28
CLDND1-211ENST00000506575 SRA1Q9HD15 236 aaKnown RBP13.33□□□□□ -0.28
CLDND1-211ENST00000506575 CDH10Q9Y6N8 788 aa13.33□□□□□ -0.28
CLDND1-211ENST00000506575 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.32□□□□□ -0.28
CLDND1-211ENST00000506575 PLSCR5A0PG75 271 aa13.32□□□□□ -0.28
CLDND1-211ENST00000506575 GYG2O15488 501 aa13.32□□□□□ -0.28
CLDND1-211ENST00000506575 TPD52L2O43399 206 aaKnown RBP13.32□□□□□ -0.28
CLDND1-211ENST00000506575 ICMTO60725 284 aa13.32□□□□□ -0.28
CLDND1-211ENST00000506575 RAP2AP10114 183 aa13.32□□□□□ -0.28
CLDND1-211ENST00000506575 ZNF16P17020 682 aaPredicted RBP13.32□□□□□ -0.28
CLDND1-211ENST00000506575 TRAP1Q12931 704 aaKnown RBP13.32□□□□□ -0.28
CLDND1-211ENST00000506575 PPP1R8Q12972 351 aaKnown RBP13.32□□□□□ -0.28
CLDND1-211ENST00000506575 KCNMB1Q16558 191 aa13.32□□□□□ -0.28
CLDND1-211ENST00000506575 DNAL1Q4LDG9 190 aa13.32□□□□□ -0.28
CLDND1-211ENST00000506575 CLEC12AQ5QGZ9 265 aa13.32□□□□□ -0.28
CLDND1-211ENST00000506575 ELFN2Q5R3F8 820 aa13.32□□□□□ -0.28
CLDND1-211ENST00000506575 OTPQ5XKR4 325 aa13.32□□□□□ -0.28
CLDND1-211ENST00000506575 RFPL4BQ6ZWI9 263 aa13.32□□□□□ -0.28
CLDND1-211ENST00000506575 VASH1Q7L8A9 365 aaPredicted RBP13.32□□□□□ -0.28
CLDND1-211ENST00000506575 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.32□□□□□ -0.28
CLDND1-211ENST00000506575 OR4C15Q8NGM1 316 aa13.32□□□□□ -0.28
CLDND1-211ENST00000506575 KLF14Q8TD94 323 aaPredicted RBP13.32□□□□□ -0.28
CLDND1-211ENST00000506575 IPCEF1Q8WWN9 437 aaPredicted RBP13.32□□□□□ -0.28
CLDND1-211ENST00000506575 MARS2Q96GW9 593 aaKnown RBP13.32□□□□□ -0.28
CLDND1-211ENST00000506575 EGLN3Q9H6Z9 239 aa13.32□□□□□ -0.28
CLDND1-211ENST00000506575 RPRD1BQ9NQG5 326 aaKnown RBP13.32□□□□□ -0.28
CLDND1-211ENST00000506575 B9D1Q9UPM9 204 aa13.32□□□□□ -0.28
CLDND1-211ENST00000506575 SAMHD1Q9Y3Z3 626 aaKnown RBP13.32□□□□□ -0.28
CLDND1-211ENST00000506575 IGLV1-36A0A0B4J1U3 117 aa13.31□□□□□ -0.28
CLDND1-211ENST00000506575 H3BSA7 217 aa13.31□□□□□ -0.28
CLDND1-211ENST00000506575 NCR1O76036 304 aa13.31□□□□□ -0.28
CLDND1-211ENST00000506575 UBOX5O94941 541 aa13.31□□□□□ -0.28
CLDND1-211ENST00000506575 NGFP01138 241 aa13.31□□□□□ -0.28
CLDND1-211ENST00000506575 GASTP01350 101 aa13.31□□□□□ -0.28
CLDND1-211ENST00000506575 GSTM3P21266 225 aa13.31□□□□□ -0.28
CLDND1-211ENST00000506575 ACHEP22303 614 aa13.31□□□□□ -0.28
CLDND1-211ENST00000506575 MPV17P39210 176 aa13.31□□□□□ -0.28
CLDND1-211ENST00000506575 MAGEB1P43366 347 aa13.31□□□□□ -0.28
CLDND1-211ENST00000506575 ZNF81P51508 661 aa13.31□□□□□ -0.28
CLDND1-211ENST00000506575 CCL8P80075 99 aa13.31□□□□□ -0.28
CLDND1-211ENST00000506575 MRPS11P82912 194 aaKnown RBP13.31□□□□□ -0.28
CLDND1-211ENST00000506575 RIN1Q13671 783 aa13.31□□□□□ -0.28
CLDND1-211ENST00000506575 SLC36A3Q495N2 470 aa13.31□□□□□ -0.28
CLDND1-211ENST00000506575 SLC35F1Q5T1Q4 408 aa13.31□□□□□ -0.28
CLDND1-211ENST00000506575 MBNL2Q5VZF2 373 aaKnown RBP13.31□□□□□ -0.28
CLDND1-211ENST00000506575 RASSF6Q6ZTQ3 369 aa13.31□□□□□ -0.28
CLDND1-211ENST00000506575 OR6V1Q8N148 313 aa13.31□□□□□ -0.28
CLDND1-211ENST00000506575 AQP11Q8NBQ7 271 aa13.31□□□□□ -0.28
CLDND1-211ENST00000506575 NPEPL1Q8NDH3 523 aa13.31□□□□□ -0.28
CLDND1-211ENST00000506575 SDR9C7Q8NEX9 313 aa13.31□□□□□ -0.28
CLDND1-211ENST00000506575 OR52E2Q8NGJ4 325 aa13.31□□□□□ -0.28
CLDND1-211ENST00000506575 RACGAP1Q9H0H5 632 aa13.31□□□□□ -0.28
CLDND1-211ENST00000506575 CYSLTR2Q9NS75 346 aa13.31□□□□□ -0.28
CLDND1-211ENST00000506575 DECR2Q9NUI1 292 aa13.31□□□□□ -0.28
CLDND1-211ENST00000506575 TBC1D23Q9NUY8 699 aa13.31□□□□□ -0.28
CLDND1-211ENST00000506575 NKIRAS2Q9NYR9 191 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms