RNA–Protein interactions for RNA: ENST00000505397.1

LIN54-204, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIN54, Length 2,742 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-204ENST00000505397 SFRP5Q5T4F7 317 aa15.2■□□□□ 0.02
LIN54-204ENST00000505397 SLC18B1Q6NT16 456 aa15.2■□□□□ 0.02
LIN54-204ENST00000505397 TMUB2Q71RG4 321 aa15.2■□□□□ 0.02
LIN54-204ENST00000505397 SLC35D2Q76EJ3 337 aa15.2■□□□□ 0.02
LIN54-204ENST00000505397 MARCH3Q86UD3 253 aa15.2■□□□□ 0.02
LIN54-204ENST00000505397 OR1J4Q8NGS1 313 aa15.2■□□□□ 0.02
LIN54-204ENST00000505397 STT3BQ8TCJ2 826 aa15.2■□□□□ 0.02
LIN54-204ENST00000505397 METTL21AQ8WXB1 218 aa15.2■□□□□ 0.02
LIN54-204ENST00000505397 OMA1Q96E52 524 aa15.2■□□□□ 0.02
LIN54-204ENST00000505397 APMAPQ9HDC9 416 aa15.2■□□□□ 0.02
LIN54-204ENST00000505397 VPS13AQ96RL7 3174 aa15.19■□□□□ 0.02
LIN54-204ENST00000505397 TO15178 435 aa15.19■□□□□ 0.02
LIN54-204ENST00000505397 DXOO77932 396 aaKnown RBP15.19■□□□□ 0.02
LIN54-204ENST00000505397 SIX6O95475 246 aa15.19■□□□□ 0.02
LIN54-204ENST00000505397 IGHMP01871 453 aa15.19■□□□□ 0.02
LIN54-204ENST00000505397 CD3DP04234 171 aa15.19■□□□□ 0.02
LIN54-204ENST00000505397 ITGB2P05107 769 aa15.19■□□□□ 0.02
LIN54-204ENST00000505397 NMBP08949 121 aa15.19■□□□□ 0.02
LIN54-204ENST00000505397 IGFBP3P17936 291 aaPredicted RBP15.19■□□□□ 0.02
LIN54-204ENST00000505397 EFNA3P52797 238 aa15.19■□□□□ 0.02
LIN54-204ENST00000505397 EBPQ15125 230 aaKnown RBP15.19■□□□□ 0.02
LIN54-204ENST00000505397 TMEM225Q6GV28 225 aa15.19■□□□□ 0.02
LIN54-204ENST00000505397 OR7E24Q6IFN5 339 aa15.19■□□□□ 0.02
LIN54-204ENST00000505397 SHISA6Q6ZSJ9 500 aa15.19■□□□□ 0.02
LIN54-204ENST00000505397 COX15Q7KZN9 410 aa15.19■□□□□ 0.02
LIN54-204ENST00000505397 NAXDQ8IW45 347 aa15.19■□□□□ 0.02
LIN54-204ENST00000505397 CPAMD8Q8IZJ3 1885 aa15.19■□□□□ 0.02
LIN54-204ENST00000505397 SPERTQ8NA61 448 aa15.19■□□□□ 0.02
LIN54-204ENST00000505397 ASB5Q8WWX0 329 aa15.19■□□□□ 0.02
LIN54-204ENST00000505397 ASB13Q8WXK3 278 aa15.19■□□□□ 0.02
LIN54-204ENST00000505397 PPP1R14AQ96A00 147 aa15.19■□□□□ 0.02
LIN54-204ENST00000505397 NUDT9Q9BW91 350 aa15.19■□□□□ 0.02
LIN54-204ENST00000505397 CDV3Q9UKY7 258 aaKnown RBP15.19■□□□□ 0.02
LIN54-204ENST00000505397 F5H5P2 479 aa15.19■□□□□ 0.02
LIN54-204ENST00000505397 SULT1C2O00338 296 aa15.19■□□□□ 0.02
LIN54-204ENST00000505397 POU3F2P20265 443 aaPredicted RBP15.19■□□□□ 0.02
LIN54-204ENST00000505397 NKAIN1Q4KMZ8 207 aa15.19■□□□□ 0.02
LIN54-204ENST00000505397 OTPQ5XKR4 325 aa15.19■□□□□ 0.02
LIN54-204ENST00000505397 SLC29A4Q7RTT9 530 aa15.19■□□□□ 0.02
LIN54-204ENST00000505397 PPP1R3BQ86XI6 285 aa15.19■□□□□ 0.02
LIN54-204ENST00000505397 CATSPERDQ86XM0 798 aa15.19■□□□□ 0.02
LIN54-204ENST00000505397 PLPP5Q8NEB5 264 aa15.19■□□□□ 0.02
LIN54-204ENST00000505397 TGIF2Q9GZN2 237 aa15.19■□□□□ 0.02
LIN54-204ENST00000505397 TXNIPQ9H3M7 391 aa15.19■□□□□ 0.02
LIN54-204ENST00000505397 WDR87Q6ZQQ6 2873 aa15.19■□□□□ 0.02
LIN54-204ENST00000505397 SPEGQ15772 3267 aa15.19■□□□□ 0.02
LIN54-204ENST00000505397 TIAF1O95411 115 aa15.18■□□□□ 0.02
LIN54-204ENST00000505397 RLN1P04808 185 aa15.18■□□□□ 0.02
LIN54-204ENST00000505397 FBXO45P0C2W1 286 aa15.18■□□□□ 0.02
LIN54-204ENST00000505397 ZNF35P13682 527 aa15.18■□□□□ 0.02
LIN54-204ENST00000505397 GABRA1P14867 456 aa15.18■□□□□ 0.02
LIN54-204ENST00000505397 FSTP19883 344 aa15.18■□□□□ 0.02
LIN54-204ENST00000505397 MFGE8Q08431 387 aaPredicted RBP15.18■□□□□ 0.02
LIN54-204ENST00000505397 DCAF12L2Q5VW00 463 aa15.18■□□□□ 0.02
LIN54-204ENST00000505397 STEAP1BQ6NZ63 245 aa15.18■□□□□ 0.02
LIN54-204ENST00000505397 C9orf40Q8IXQ3 194 aa15.18■□□□□ 0.02
LIN54-204ENST00000505397 SCARB1Q8WTV0 552 aa15.18■□□□□ 0.02
LIN54-204ENST00000505397 SDHAF2Q9NX18 166 aa15.18■□□□□ 0.02
LIN54-204ENST00000505397 ARPC5O15511 151 aa15.18■□□□□ 0.02
LIN54-204ENST00000505397 SRSF10O75494 262 aaKnown RBP15.18■□□□□ 0.02
LIN54-204ENST00000505397 HLA-DQA2P01906 255 aa15.18■□□□□ 0.02
LIN54-204ENST00000505397 PPP3CBP16298 524 aa15.18■□□□□ 0.02
LIN54-204ENST00000505397 PGCP20142 388 aa15.18■□□□□ 0.02
LIN54-204ENST00000505397 ZP3P21754 424 aa15.18■□□□□ 0.02
LIN54-204ENST00000505397 IL12BP29460 328 aa15.18■□□□□ 0.02
LIN54-204ENST00000505397 LANCL3Q6ZV70 420 aa15.18■□□□□ 0.02
LIN54-204ENST00000505397 KRT77Q7Z794 578 aa15.18■□□□□ 0.02
LIN54-204ENST00000505397 OR1N1Q8NGS0 311 aa15.18■□□□□ 0.02
LIN54-204ENST00000505397 NRSN2Q9GZP1 204 aa15.18■□□□□ 0.02
LIN54-204ENST00000505397 SLC22A11Q9NSA0 550 aa15.18■□□□□ 0.02
LIN54-204ENST00000505397 DHDHQ9UQ10 334 aa15.18■□□□□ 0.02
LIN54-204ENST00000505397 GOSR2O14653 212 aa15.17■□□□□ 0.02
LIN54-204ENST00000505397 GMFGO60234 142 aa15.17■□□□□ 0.02
LIN54-204ENST00000505397 DOK2O60496 412 aa15.17■□□□□ 0.02
LIN54-204ENST00000505397 SLC16A7O60669 478 aa15.17■□□□□ 0.02
LIN54-204ENST00000505397 RP2O75695 350 aa15.17■□□□□ 0.02
LIN54-204ENST00000505397 PLGP00747 810 aaPredicted RBP15.17■□□□□ 0.02
LIN54-204ENST00000505397 CTLA4P16410 223 aa15.17■□□□□ 0.02
LIN54-204ENST00000505397 DCDP81605 110 aaKnown RBP15.17■□□□□ 0.02
LIN54-204ENST00000505397 POMZP3Q6PJE2 187 aa15.17■□□□□ 0.02
LIN54-204ENST00000505397 CDH26Q8IXH8 852 aa15.17■□□□□ 0.02
LIN54-204ENST00000505397 GABRG1Q8N1C3 465 aa15.17■□□□□ 0.02
LIN54-204ENST00000505397 SEH1LQ96EE3 360 aa15.17■□□□□ 0.02
LIN54-204ENST00000505397 DNAJA3Q96EY1 480 aa15.17■□□□□ 0.02
LIN54-204ENST00000505397 FOXN4Q96NZ1 517 aa15.17■□□□□ 0.02
LIN54-204ENST00000505397 CHST6Q9GZX3 395 aa15.17■□□□□ 0.02
LIN54-204ENST00000505397 SLC22A23A1A5C7 686 aa15.17■□□□□ 0.02
LIN54-204ENST00000505397 CDC14CA4D256 554 aa15.17■□□□□ 0.02
LIN54-204ENST00000505397 MEIS3P1A6NDR6 274 aa15.17■□□□□ 0.02
LIN54-204ENST00000505397 HEXBP07686 556 aa15.17■□□□□ 0.02
LIN54-204ENST00000505397 ACTBP60709 375 aa15.17■□□□□ 0.02
LIN54-204ENST00000505397 UBE2MP61081 183 aaKnown RBP15.17■□□□□ 0.02
LIN54-204ENST00000505397 ACTG1P63261 375 aa15.17■□□□□ 0.02
LIN54-204ENST00000505397 OC90Q02509 493 aaPredicted RBP15.17■□□□□ 0.02
LIN54-204ENST00000505397 ETFDHQ16134 617 aa15.17■□□□□ 0.02
LIN54-204ENST00000505397 KCTD18Q6PI47 426 aaPredicted RBP15.17■□□□□ 0.02
LIN54-204ENST00000505397 NDUFAF7Q7L592 441 aa15.17■□□□□ 0.02
LIN54-204ENST00000505397 TMEM229BQ8NBD8 167 aa15.17■□□□□ 0.02
LIN54-204ENST00000505397 PLPP7Q8NBV4 271 aa15.17■□□□□ 0.02
LIN54-204ENST00000505397 SLC38A9Q8NBW4 561 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms