RNA–Protein interactions for RNA: ENST00000505066.5

DDR1-256, Transcript of discoidin domain receptor tyrosine kinase 1, human

TSL 4

Gene DDR1, Length 556 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-256	ENST00000505066	TBCCD1	Q9NVR7	557 aa		13.91	□□□□□ -0.18
DDR1-256	ENST00000505066	PLEK2	Q9NYT0	353 aa		13.91	□□□□□ -0.18
DDR1-256	ENST00000505066	RHCG	Q9UBD6	479 aa		13.91	□□□□□ -0.18
DDR1-256	ENST00000505066	RPS6KA6	Q9UK32	745 aa		13.91	□□□□□ -0.18
DDR1-256	ENST00000505066	AURKC	Q9UQB9	309 aa		13.91	□□□□□ -0.18
DDR1-256	ENST00000505066	NPTN	Q9Y639	398 aa		13.91	□□□□□ -0.18
DDR1-256	ENST00000505066	ANK3	Q12955	4377 aa	Known RBP	13.9	□□□□□ -0.18
DDR1-256	ENST00000505066	CXCR6	O00574	342 aa		13.9	□□□□□ -0.18
DDR1-256	ENST00000505066	CD55	P08174	381 aa		13.9	□□□□□ -0.18
DDR1-256	ENST00000505066	CD14	P08571	375 aa		13.9	□□□□□ -0.18
DDR1-256	ENST00000505066	CENPA	P49450	140 aa		13.9	□□□□□ -0.18
DDR1-256	ENST00000505066	RGS6	P49758	472 aa		13.9	□□□□□ -0.18
DDR1-256	ENST00000505066	CRYBA2	P53672	197 aa		13.9	□□□□□ -0.18
DDR1-256	ENST00000505066	GUCY1A3	Q02108	690 aa		13.9	□□□□□ -0.18
DDR1-256	ENST00000505066	LIPE	Q05469	1076 aa		13.9	□□□□□ -0.18
DDR1-256	ENST00000505066	SF3A3	Q12874	501 aa	Known RBP eCLIP	13.9	□□□□□ -0.18	9e-7	■■■■□ 24.7
DDR1-256	ENST00000505066	AQP6	Q13520	282 aa		13.9	□□□□□ -0.18
DDR1-256	ENST00000505066	ZBED5	Q49AG3	693 aa		13.9	□□□□□ -0.18
DDR1-256	ENST00000505066	GPR139	Q6DWJ6	353 aa		13.9	□□□□□ -0.18
DDR1-256	ENST00000505066	C1orf94	Q6P1W5	598 aa		13.9	□□□□□ -0.18
DDR1-256	ENST00000505066	RFPL4B	Q6ZWI9	263 aa		13.9	□□□□□ -0.18
DDR1-256	ENST00000505066	MBOAT2	Q6ZWT7	520 aa		13.9	□□□□□ -0.18
DDR1-256	ENST00000505066	SGMS2	Q8NHU3	365 aa		13.9	□□□□□ -0.18
DDR1-256	ENST00000505066	ANKRD19P	Q9H560	264 aa		13.9	□□□□□ -0.18
DDR1-256	ENST00000505066	EFCAB1	Q9HAE3	211 aa		13.9	□□□□□ -0.18
DDR1-256	ENST00000505066	MSL2	Q9HCI7	577 aa		13.9	□□□□□ -0.18
DDR1-256	ENST00000505066	G6PC2	Q9NQR9	355 aa		13.9	□□□□□ -0.18
DDR1-256	ENST00000505066	POLE4	Q9NR33	117 aa		13.9	□□□□□ -0.18
DDR1-256	ENST00000505066	OR5V1	Q9UGF6	321 aa		13.9	□□□□□ -0.18
DDR1-256	ENST00000505066	A4GNT	Q9UNA3	340 aa		13.9	□□□□□ -0.18
DDR1-256	ENST00000505066	PPP1R3C	Q9UQK1	317 aa		13.9	□□□□□ -0.18
DDR1-256	ENST00000505066	ZSCAN5B	A6NJL1	495 aa		13.89	□□□□□ -0.19
DDR1-256	ENST00000505066	LRRC30	A6NM36	301 aa		13.89	□□□□□ -0.19
DDR1-256	ENST00000505066		J3QW42	95 aa		13.89	□□□□□ -0.19
DDR1-256	ENST00000505066	FXYD1	O00168	92 aa		13.89	□□□□□ -0.19
DDR1-256	ENST00000505066	KHDRBS3	O75525	346 aa	Known RBP	13.89	□□□□□ -0.19
DDR1-256	ENST00000505066	NDUFB2	O95178	105 aa		13.89	□□□□□ -0.19
DDR1-256	ENST00000505066	CFP	P27918	469 aa		13.89	□□□□□ -0.19
DDR1-256	ENST00000505066	ESCO2	Q56NI9	601 aa		13.89	□□□□□ -0.19
DDR1-256	ENST00000505066	FGD3	Q5JSP0	725 aa		13.89	□□□□□ -0.19
DDR1-256	ENST00000505066	PGM2L1	Q6PCE3	622 aa		13.89	□□□□□ -0.19
DDR1-256	ENST00000505066	GLB1L2	Q8IW92	636 aa		13.89	□□□□□ -0.19
DDR1-256	ENST00000505066	MUC20	Q8N307	709 aa	Predicted RBP	13.89	□□□□□ -0.19
DDR1-256	ENST00000505066	ATG16L2	Q8NAA4	619 aa		13.89	□□□□□ -0.19
DDR1-256	ENST00000505066	SEMA6D	Q8NFY4	1073 aa		13.89	□□□□□ -0.19
DDR1-256	ENST00000505066	OR13C2	Q8NGS9	318 aa		13.89	□□□□□ -0.19
DDR1-256	ENST00000505066	GTF3A	Q92664	365 aa	Known RBP	13.89	□□□□□ -0.19
DDR1-256	ENST00000505066	PTP4A1	Q93096	173 aa		13.89	□□□□□ -0.19
DDR1-256	ENST00000505066	RCN3	Q96D15	328 aa		13.89	□□□□□ -0.19
DDR1-256	ENST00000505066	NMD3	Q96D46	503 aa	Known RBP	13.89	□□□□□ -0.19
DDR1-256	ENST00000505066	SAMD8	Q96LT4	415 aa		13.89	□□□□□ -0.19
DDR1-256	ENST00000505066	TMEM106B	Q9NUM4	274 aa		13.89	□□□□□ -0.19
DDR1-256	ENST00000505066	CACNG2	Q9Y698	323 aa		13.89	□□□□□ -0.19
DDR1-256	ENST00000505066	PPIAL4E	A0A075B759	164 aa		13.88	□□□□□ -0.19
DDR1-256	ENST00000505066	PPIAL4C	A0A0B4J2A2	164 aa		13.88	□□□□□ -0.19
DDR1-256	ENST00000505066	PRSS37	A4D1T9	235 aa		13.88	□□□□□ -0.19
DDR1-256	ENST00000505066	PPIAL4D	F5H284	164 aa		13.88	□□□□□ -0.19
DDR1-256	ENST00000505066	ICMT	O60725	284 aa		13.88	□□□□□ -0.19
DDR1-256	ENST00000505066	DEAF1	O75398	565 aa	Predicted RBP	13.88	□□□□□ -0.19
DDR1-256	ENST00000505066	UBOX5	O94941	541 aa		13.88	□□□□□ -0.19
DDR1-256	ENST00000505066	PRSS23	O95084	383 aa		13.88	□□□□□ -0.19
DDR1-256	ENST00000505066	NGF	P01138	241 aa		13.88	□□□□□ -0.19
DDR1-256	ENST00000505066	PPIAL4F	P0DN26	164 aa		13.88	□□□□□ -0.19
DDR1-256	ENST00000505066	GPR4	P46093	362 aa		13.88	□□□□□ -0.19
DDR1-256	ENST00000505066	RPS6KA3	P51812	740 aa		13.88	□□□□□ -0.19
DDR1-256	ENST00000505066	SMIM11A	P58511	58 aa		13.88	□□□□□ -0.19
DDR1-256	ENST00000505066	VTCN1	Q7Z7D3	282 aa		13.88	□□□□□ -0.19
DDR1-256	ENST00000505066	ADCK1	Q86TW2	530 aa		13.88	□□□□□ -0.19
DDR1-256	ENST00000505066	POP5	Q969H6	163 aa	Known RBP	13.88	□□□□□ -0.19
DDR1-256	ENST00000505066	CMBL	Q96DG6	245 aa		13.88	□□□□□ -0.19
DDR1-256	ENST00000505066	SLC6A7	Q99884	636 aa		13.88	□□□□□ -0.19
DDR1-256	ENST00000505066	KCTD14	Q9BQ13	255 aa	Predicted RBP	13.88	□□□□□ -0.19
DDR1-256	ENST00000505066	TMPRSS13	Q9BYE2	586 aa		13.88	□□□□□ -0.19
DDR1-256	ENST00000505066	ZMAT3	Q9HA38	289 aa	Known RBP	13.88	□□□□□ -0.19
DDR1-256	ENST00000505066	EMC7	Q9NPA0	242 aa		13.88	□□□□□ -0.19
DDR1-256	ENST00000505066	IL19	Q9UHD0	177 aa		13.88	□□□□□ -0.19
DDR1-256	ENST00000505066	PURG	Q9UJV8	347 aa	Known RBP	13.88	□□□□□ -0.19
DDR1-256	ENST00000505066	AUP1	Q9Y679	476 aa		13.88	□□□□□ -0.19
DDR1-256	ENST00000505066	YLPM1	P49750	1951 aa	Known RBP	13.87	□□□□□ -0.19
DDR1-256	ENST00000505066	IGKV1D-43	A0A0B4J1Z2	117 aa		13.87	□□□□□ -0.19
DDR1-256	ENST00000505066	OR6C6	A6NF89	314 aa		13.87	□□□□□ -0.19
DDR1-256	ENST00000505066		H7C1C5	153 aa		13.87	□□□□□ -0.19
DDR1-256	ENST00000505066	SLC16A7	O60669	478 aa		13.87	□□□□□ -0.19
DDR1-256	ENST00000505066	SERPINA1	P01009	418 aa		13.87	□□□□□ -0.19
DDR1-256	ENST00000505066	H1F0	P07305	194 aa	Known RBP	13.87	□□□□□ -0.19
DDR1-256	ENST00000505066	IRF2	P14316	349 aa		13.87	□□□□□ -0.19
DDR1-256	ENST00000505066	SELE	P16581	610 aa		13.87	□□□□□ -0.19
DDR1-256	ENST00000505066	ADRA2C	P18825	462 aa		13.87	□□□□□ -0.19
DDR1-256	ENST00000505066	CPT2	P23786	658 aa		13.87	□□□□□ -0.19
DDR1-256	ENST00000505066	CRABP1	P29762	137 aa		13.87	□□□□□ -0.19
DDR1-256	ENST00000505066	SRP9	P49458	86 aa	Known RBP	13.87	□□□□□ -0.19
DDR1-256	ENST00000505066	LSM6	P62312	80 aa	Known RBP	13.87	□□□□□ -0.19
DDR1-256	ENST00000505066	LCN6	P62502	163 aa		13.87	□□□□□ -0.19
DDR1-256	ENST00000505066	PSG7	Q13046	419 aa		13.87	□□□□□ -0.19
DDR1-256	ENST00000505066	CDK5R2	Q13319	367 aa		13.87	□□□□□ -0.19
DDR1-256	ENST00000505066	ENDOG	Q14249	297 aa	Known RBP	13.87	□□□□□ -0.19
DDR1-256	ENST00000505066	TMEM155	Q4W5P6	130 aa		13.87	□□□□□ -0.19
DDR1-256	ENST00000505066	BTNL3	Q6UXE8	466 aa		13.87	□□□□□ -0.19
DDR1-256	ENST00000505066	FOXL2NB	Q6ZUU3	175 aa		13.87	□□□□□ -0.19
DDR1-256	ENST00000505066	TMPRSS11F	Q6ZWK6	438 aa		13.87	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms