RNA–Protein interactions for RNA: ENST00000505065.1

CDC42SE2-208, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 4,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-208ENST00000505065 OR2T7P0C7T2 308 aa7.17□□□□□ -1.26
CDC42SE2-208ENST00000505065 ZNF91Q05481 1191 aa7.17□□□□□ -1.26
CDC42SE2-208ENST00000505065 TOP3AQ13472 1001 aaPredicted RBP7.17□□□□□ -1.26
CDC42SE2-208ENST00000505065 APOFQ13790 326 aa7.17□□□□□ -1.26
CDC42SE2-208ENST00000505065 TCEANCQ8N8B7 351 aa7.17□□□□□ -1.26
CDC42SE2-208ENST00000505065 SYT14Q8NB59 555 aa7.17□□□□□ -1.26
CDC42SE2-208ENST00000505065 OR2T27Q8NH04 317 aa7.17□□□□□ -1.26
CDC42SE2-208ENST00000505065 ASB17Q8WXJ9 295 aa7.17□□□□□ -1.26
CDC42SE2-208ENST00000505065 HDHD2Q9H0R4 259 aa7.17□□□□□ -1.26
CDC42SE2-208ENST00000505065 FAM206AQ9NX38 181 aa7.17□□□□□ -1.26
CDC42SE2-208ENST00000505065 PHYHO14832 338 aa7.16□□□□□ -1.26
CDC42SE2-208ENST00000505065 ZNF254O75437 659 aa7.16□□□□□ -1.26
CDC42SE2-208ENST00000505065 BAG2O95816 211 aa7.16□□□□□ -1.26
CDC42SE2-208ENST00000505065 GPANK1O95872 356 aa7.16□□□□□ -1.26
CDC42SE2-208ENST00000505065 CECR9P0C854 216 aa7.16□□□□□ -1.26
CDC42SE2-208ENST00000505065 B4GALT1P15291 398 aa7.16□□□□□ -1.26
CDC42SE2-208ENST00000505065 NUDT6P53370 316 aa7.16□□□□□ -1.26
CDC42SE2-208ENST00000505065 NR1H2P55055 460 aa7.16□□□□□ -1.26
CDC42SE2-208ENST00000505065 SHFQ7M4L6 423 aa7.16□□□□□ -1.26
CDC42SE2-208ENST00000505065 SYS1Q8N2H4 156 aa7.16□□□□□ -1.26
CDC42SE2-208ENST00000505065 OR52I1Q8NGK6 324 aa7.16□□□□□ -1.26
CDC42SE2-208ENST00000505065 LRRC46Q96FV0 321 aa7.16□□□□□ -1.26
CDC42SE2-208ENST00000505065 AMELYQ99218 206 aa7.16□□□□□ -1.26
CDC42SE2-208ENST00000505065 APOL4Q9BPW4 351 aa7.16□□□□□ -1.26
CDC42SE2-208ENST00000505065 SEC61A2Q9H9S3 476 aa7.16□□□□□ -1.26
CDC42SE2-208ENST00000505065 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP7.16□□□□□ -1.26
CDC42SE2-208ENST00000505065 GMPPBQ9Y5P6 360 aa7.16□□□□□ -1.26
CDC42SE2-208ENST00000505065 H3BN98 237 aa7.16□□□□□ -1.26
CDC42SE2-208ENST00000505065 CD40P25942 277 aa7.16□□□□□ -1.26
CDC42SE2-208ENST00000505065 NAAAQ02083 359 aa7.16□□□□□ -1.26
CDC42SE2-208ENST00000505065 ECH1Q13011 328 aa7.16□□□□□ -1.26
CDC42SE2-208ENST00000505065 GSG1Q2KHT4 349 aa7.16□□□□□ -1.26
CDC42SE2-208ENST00000505065 LYPD4Q6UWN0 246 aa7.16□□□□□ -1.26
CDC42SE2-208ENST00000505065 B3GLCTQ6Y288 498 aa7.16□□□□□ -1.26
CDC42SE2-208ENST00000505065 LUZP2Q86TE4 346 aa7.16□□□□□ -1.26
CDC42SE2-208ENST00000505065 RFLNBQ8N5W9 214 aa7.16□□□□□ -1.26
CDC42SE2-208ENST00000505065 RFKQ969G6 155 aa7.16□□□□□ -1.26
CDC42SE2-208ENST00000505065 ZNF775Q96BV0 537 aaPredicted RBP7.16□□□□□ -1.26
CDC42SE2-208ENST00000505065 TVP23BQ9NYZ1 205 aa7.16□□□□□ -1.26
CDC42SE2-208ENST00000505065 GDF2Q9UK05 429 aaPredicted RBP7.16□□□□□ -1.26
CDC42SE2-208ENST00000505065 ORC6Q9Y5N6 252 aa7.16□□□□□ -1.26
CDC42SE2-208ENST00000505065 DANCRP0C864 163 aa7.16□□□□□ -1.26
CDC42SE2-208ENST00000505065 PAICSP22234 425 aaKnown RBP7.16□□□□□ -1.26
CDC42SE2-208ENST00000505065 CRHBPP24387 322 aa7.16□□□□□ -1.26
CDC42SE2-208ENST00000505065 PTAFRP25105 342 aa7.16□□□□□ -1.26
CDC42SE2-208ENST00000505065 SNAPC1Q16533 368 aa7.16□□□□□ -1.26
CDC42SE2-208ENST00000505065 MSMPQ1L6U9 139 aa7.16□□□□□ -1.26
CDC42SE2-208ENST00000505065 SLC36A2Q495M3 483 aa7.16□□□□□ -1.26
CDC42SE2-208ENST00000505065 ZNF672Q499Z4 452 aaPredicted RBP7.16□□□□□ -1.26
CDC42SE2-208ENST00000505065 ELFN2Q5R3F8 820 aa7.16□□□□□ -1.26
CDC42SE2-208ENST00000505065 RBM48Q5RL73 367 aaKnown RBP7.16□□□□□ -1.26
CDC42SE2-208ENST00000505065 SLC35F1Q5T1Q4 408 aa7.16□□□□□ -1.26
CDC42SE2-208ENST00000505065 ZNF813Q6ZN06 617 aa7.16□□□□□ -1.26
CDC42SE2-208ENST00000505065 THAP5Q7Z6K1 395 aa7.16□□□□□ -1.26
CDC42SE2-208ENST00000505065 PAQR4Q8N4S7 273 aaPredicted RBP7.16□□□□□ -1.26
CDC42SE2-208ENST00000505065 OR52N5Q8NH56 324 aa7.16□□□□□ -1.26
CDC42SE2-208ENST00000505065 RNF217Q8TC41 542 aa7.16□□□□□ -1.26
CDC42SE2-208ENST00000505065 HS3ST6Q96QI5 342 aa7.16□□□□□ -1.26
CDC42SE2-208ENST00000505065 OR8B4Q96RC9 309 aa7.16□□□□□ -1.26
CDC42SE2-208ENST00000505065 INTS14Q96SY0 518 aa7.16□□□□□ -1.26
CDC42SE2-208ENST00000505065 SH3GL3Q99963 347 aa7.16□□□□□ -1.26
CDC42SE2-208ENST00000505065 ISYNA1Q9NPH2 558 aa7.16□□□□□ -1.26
CDC42SE2-208ENST00000505065 RASSF1Q9NS23 344 aa7.16□□□□□ -1.26
CDC42SE2-208ENST00000505065 LOC390937A0A1W2PQ73 354 aa7.15□□□□□ -1.26
CDC42SE2-208ENST00000505065 TMEM129A0AVI4 362 aa7.15□□□□□ -1.26
CDC42SE2-208ENST00000505065 FAM183AA6NL82 134 aa7.15□□□□□ -1.26
CDC42SE2-208ENST00000505065 FAM90A27PA6NNH2 459 aa7.15□□□□□ -1.26
CDC42SE2-208ENST00000505065 ZNF32P17041 273 aa7.15□□□□□ -1.26
CDC42SE2-208ENST00000505065 PCMT1P22061 227 aa7.15□□□□□ -1.26
CDC42SE2-208ENST00000505065 KLHL12Q53G59 568 aa7.15□□□□□ -1.26
CDC42SE2-208ENST00000505065 CARD17Q5XLA6 110 aa7.15□□□□□ -1.26
CDC42SE2-208ENST00000505065 IZUMO2Q6UXV1 221 aa7.15□□□□□ -1.26
CDC42SE2-208ENST00000505065 FBXW12Q6X9E4 464 aa7.15□□□□□ -1.26
CDC42SE2-208ENST00000505065 SSX6Q7RTT6 188 aa7.15□□□□□ -1.26
CDC42SE2-208ENST00000505065 BCDIN3DQ7Z5W3 292 aaKnown RBP7.15□□□□□ -1.26
CDC42SE2-208ENST00000505065 CYB561A3Q8NBI2 242 aa7.15□□□□□ -1.26
CDC42SE2-208ENST00000505065 GJC3Q8NFK1 279 aa7.15□□□□□ -1.26
CDC42SE2-208ENST00000505065 OR6N1Q8NGY5 312 aa7.15□□□□□ -1.26
CDC42SE2-208ENST00000505065 NANOS1Q8WY41 292 aaKnown RBP7.15□□□□□ -1.26
CDC42SE2-208ENST00000505065 Q96MT0 163 aa7.15□□□□□ -1.26
CDC42SE2-208ENST00000505065 G6PC2Q9NQR9 355 aa7.15□□□□□ -1.26
CDC42SE2-208ENST00000505065 TBCCD1Q9NVR7 557 aa7.15□□□□□ -1.26
CDC42SE2-208ENST00000505065 PYCARD-AS1I3L0S3 204 aa7.15□□□□□ -1.26
CDC42SE2-208ENST00000505065 M0R129 80 aa7.15□□□□□ -1.26
CDC42SE2-208ENST00000505065 TLX2O43763 284 aaPredicted RBP7.15□□□□□ -1.26
CDC42SE2-208ENST00000505065 ISG15P05161 165 aa7.15□□□□□ -1.26
CDC42SE2-208ENST00000505065 CELA3BP08861 270 aa7.15□□□□□ -1.26
CDC42SE2-208ENST00000505065 LIMS3P0CW19 117 aa7.15□□□□□ -1.26
CDC42SE2-208ENST00000505065 LIMS4P0CW20 117 aa7.15□□□□□ -1.26
CDC42SE2-208ENST00000505065 KITLGP21583 273 aa7.15□□□□□ -1.26
CDC42SE2-208ENST00000505065 PYCR1P32322 319 aa7.15□□□□□ -1.26
CDC42SE2-208ENST00000505065 TGM4P49221 684 aa7.15□□□□□ -1.26
CDC42SE2-208ENST00000505065 BDH1Q02338 343 aa7.15□□□□□ -1.26
CDC42SE2-208ENST00000505065 TNK1Q13470 666 aa7.15□□□□□ -1.26
CDC42SE2-208ENST00000505065 GALEQ14376 348 aa7.15□□□□□ -1.26
CDC42SE2-208ENST00000505065 TSC22D1Q15714 1073 aa7.15□□□□□ -1.26
CDC42SE2-208ENST00000505065 SNCBQ16143 134 aa7.15□□□□□ -1.26
CDC42SE2-208ENST00000505065 BEX5Q5H9J7 111 aa7.15□□□□□ -1.26
CDC42SE2-208ENST00000505065 C6orf141Q5SZD1 244 aa7.15□□□□□ -1.26
CDC42SE2-208ENST00000505065 C6orf52Q5T4I8 152 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms