RNA–Protein interactions for RNA: ENST00000505005.5

NR1I3-220, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 985 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-220ENST00000505005 ZNF75AQ96N20 296 aa8.53□□□□□ -1.04
NR1I3-220ENST00000505005 NMNAT3Q96T66 252 aa8.53□□□□□ -1.04
NR1I3-220ENST00000505005 COQ7Q99807 217 aa8.53□□□□□ -1.04
NR1I3-220ENST00000505005 RBM4BQ9BQ04 359 aaKnown RBP8.53□□□□□ -1.04
NR1I3-220ENST00000505005 RBM4Q9BWF3 364 aaKnown RBP8.53□□□□□ -1.04
NR1I3-220ENST00000505005 ZNF416Q9BWM5 594 aa8.53□□□□□ -1.04
NR1I3-220ENST00000505005 TOR3AQ9H497 397 aa8.53□□□□□ -1.04
NR1I3-220ENST00000505005 RERGLQ9H628 205 aa8.53□□□□□ -1.04
NR1I3-220ENST00000505005 SRA1Q9HD15 236 aaKnown RBP8.53□□□□□ -1.04
NR1I3-220ENST00000505005 DYNLRB1Q9NP97 96 aa8.53□□□□□ -1.04
NR1I3-220ENST00000505005 RPRD1BQ9NQG5 326 aaKnown RBP8.53□□□□□ -1.04
NR1I3-220ENST00000505005 KRT84Q9NSB2 600 aa8.53□□□□□ -1.04
NR1I3-220ENST00000505005 COA3Q9Y2R0 106 aaPredicted RBP8.53□□□□□ -1.04
NR1I3-220ENST00000505005 UGT2A1Q9Y4X1 527 aa8.53□□□□□ -1.04
NR1I3-220ENST00000505005 ARID1AO14497 2285 aa8.53□□□□□ -1.04
NR1I3-220ENST00000505005 MAST4O15021 2626 aa8.53□□□□□ -1.04
NR1I3-220ENST00000505005 A0A1W2PPR1 153 aa8.52□□□□□ -1.05
NR1I3-220ENST00000505005 H0YJX3 145 aa8.52□□□□□ -1.05
NR1I3-220ENST00000505005 M0R233 179 aa8.52□□□□□ -1.05
NR1I3-220ENST00000505005 SURF4O15260 269 aa8.52□□□□□ -1.05
NR1I3-220ENST00000505005 SEC14L2O76054 403 aa8.52□□□□□ -1.05
NR1I3-220ENST00000505005 LCKP06239 509 aa8.52□□□□□ -1.05
NR1I3-220ENST00000505005 ZNF250P15622 560 aa8.52□□□□□ -1.05
NR1I3-220ENST00000505005 SLC25A16P16260 332 aa8.52□□□□□ -1.05
NR1I3-220ENST00000505005 CTLA4P16410 223 aa8.52□□□□□ -1.05
NR1I3-220ENST00000505005 VHLP40337 213 aa8.52□□□□□ -1.05
NR1I3-220ENST00000505005 TPTEP56180 551 aa8.52□□□□□ -1.05
NR1I3-220ENST00000505005 KLF3P57682 345 aaPredicted RBP8.52□□□□□ -1.05
NR1I3-220ENST00000505005 FXYD6P3P58550 94 aa8.52□□□□□ -1.05
NR1I3-220ENST00000505005 TUBA1BP68363 451 aa8.52□□□□□ -1.05
NR1I3-220ENST00000505005 TUBA4AP68366 448 aa8.52□□□□□ -1.05
NR1I3-220ENST00000505005 MRPS11P82912 194 aaKnown RBP8.52□□□□□ -1.05
NR1I3-220ENST00000505005 PSG4Q00888 419 aa8.52□□□□□ -1.05
NR1I3-220ENST00000505005 FMODQ06828 376 aa8.52□□□□□ -1.05
NR1I3-220ENST00000505005 MALLQ13021 153 aa8.52□□□□□ -1.05
NR1I3-220ENST00000505005 Q5PR19 223 aa8.52□□□□□ -1.05
NR1I3-220ENST00000505005 CLEC12AQ5QGZ9 265 aa8.52□□□□□ -1.05
NR1I3-220ENST00000505005 ELFN2Q5R3F8 820 aa8.52□□□□□ -1.05
NR1I3-220ENST00000505005 LCN1P1Q5VSP4 162 aa8.52□□□□□ -1.05
NR1I3-220ENST00000505005 TUBA1AQ71U36 451 aa8.52□□□□□ -1.05
NR1I3-220ENST00000505005 TRUB1Q8WWH5 349 aaKnown RBP8.52□□□□□ -1.05
NR1I3-220ENST00000505005 PYDC1Q8WXC3 89 aa8.52□□□□□ -1.05
NR1I3-220ENST00000505005 APOBEC3DQ96AK3 386 aaPredicted RBP8.52□□□□□ -1.05
NR1I3-220ENST00000505005 FBXO17Q96EF6 278 aa8.52□□□□□ -1.05
NR1I3-220ENST00000505005 POM121L2Q96KW2 1035 aa8.52□□□□□ -1.05
NR1I3-220ENST00000505005 C4orf45Q96LM5 186 aa8.52□□□□□ -1.05
NR1I3-220ENST00000505005 MNTQ99583 582 aa8.52□□□□□ -1.05
NR1I3-220ENST00000505005 GPA33Q99795 319 aa8.52□□□□□ -1.05
NR1I3-220ENST00000505005 CACNG6Q9BXT2 260 aa8.52□□□□□ -1.05
NR1I3-220ENST00000505005 GABARAPL1Q9H0R8 117 aa8.52□□□□□ -1.05
NR1I3-220ENST00000505005 VCXQ9H320 206 aa8.52□□□□□ -1.05
NR1I3-220ENST00000505005 LIME1Q9H400 295 aa8.52□□□□□ -1.05
NR1I3-220ENST00000505005 OPA3Q9H6K4 179 aa8.52□□□□□ -1.05
NR1I3-220ENST00000505005 EGLN3Q9H6Z9 239 aa8.52□□□□□ -1.05
NR1I3-220ENST00000505005 NIPAL2Q9H841 368 aa8.52□□□□□ -1.05
NR1I3-220ENST00000505005 SLC25A19Q9HC21 320 aa8.52□□□□□ -1.05
NR1I3-220ENST00000505005 NKIRAS2Q9NYR9 191 aa8.52□□□□□ -1.05
NR1I3-220ENST00000505005 ZNF224Q9NZL3 707 aa8.52□□□□□ -1.05
NR1I3-220ENST00000505005 ZDHHC8Q9ULC8 765 aa8.52□□□□□ -1.05
NR1I3-220ENST00000505005 TMEM14AQ9Y6G1 99 aa8.52□□□□□ -1.05
NR1I3-220ENST00000505005 ROS1P08922 2347 aa8.52□□□□□ -1.05
NR1I3-220ENST00000505005 PLCE1Q9P212 2302 aa8.52□□□□□ -1.05
NR1I3-220ENST00000505005 LOC390937A0A1W2PQ73 354 aa8.51□□□□□ -1.05
NR1I3-220ENST00000505005 C5orf49A4QMS7 147 aa8.51□□□□□ -1.05
NR1I3-220ENST00000505005 DOK2O60496 412 aa8.51□□□□□ -1.05
NR1I3-220ENST00000505005 TIPRLO75663 272 aa8.51□□□□□ -1.05
NR1I3-220ENST00000505005 GLCEO94923 617 aa8.51□□□□□ -1.05
NR1I3-220ENST00000505005 ABHD16AO95870 558 aa8.51□□□□□ -1.05
NR1I3-220ENST00000505005 HEXAP06865 529 aa8.51□□□□□ -1.05
NR1I3-220ENST00000505005 SOD3P08294 240 aa8.51□□□□□ -1.05
NR1I3-220ENST00000505005 ZNF26P17031 533 aaPredicted RBP8.51□□□□□ -1.05
NR1I3-220ENST00000505005 CCNOP22674 350 aa8.51□□□□□ -1.05
NR1I3-220ENST00000505005 TNFSF4P23510 183 aa8.51□□□□□ -1.05
NR1I3-220ENST00000505005 CFL1P23528 166 aaKnown RBP8.51□□□□□ -1.05
NR1I3-220ENST00000505005 POU1F1P28069 291 aa8.51□□□□□ -1.05
NR1I3-220ENST00000505005 CDAP32320 146 aa8.51□□□□□ -1.05
NR1I3-220ENST00000505005 THBS4P35443 961 aa8.51□□□□□ -1.05
NR1I3-220ENST00000505005 HTR5AP47898 357 aa8.51□□□□□ -1.05
NR1I3-220ENST00000505005 PDLIM4P50479 330 aa8.51□□□□□ -1.05
NR1I3-220ENST00000505005 CRISP1P54107 249 aa8.51□□□□□ -1.05
NR1I3-220ENST00000505005 ADAM8P78325 824 aa8.51□□□□□ -1.05
NR1I3-220ENST00000505005 CDK5Q00535 292 aa8.51□□□□□ -1.05
NR1I3-220ENST00000505005 HGFACQ04756 655 aa8.51□□□□□ -1.05
NR1I3-220ENST00000505005 SLC3A1Q07837 685 aa8.51□□□□□ -1.05
NR1I3-220ENST00000505005 MZT1Q08AG7 82 aa8.51□□□□□ -1.05
NR1I3-220ENST00000505005 TMED1Q13445 227 aa8.51□□□□□ -1.05
NR1I3-220ENST00000505005 ADIPOQQ15848 244 aa8.51□□□□□ -1.05
NR1I3-220ENST00000505005 C11orf71Q6IPW1 123 aa8.51□□□□□ -1.05
NR1I3-220ENST00000505005 KRT80Q6KB66 452 aa8.51□□□□□ -1.05
NR1I3-220ENST00000505005 FAHD1Q6P587 224 aa8.51□□□□□ -1.05
NR1I3-220ENST00000505005 TMEM154Q6P9G4 183 aa8.51□□□□□ -1.05
NR1I3-220ENST00000505005 VHLLQ6RSH7 139 aa8.51□□□□□ -1.05
NR1I3-220ENST00000505005 PTCHD4Q6ZW05 846 aa8.51□□□□□ -1.05
NR1I3-220ENST00000505005 BIVMQ86UB2 503 aa8.51□□□□□ -1.05
NR1I3-220ENST00000505005 OR6V1Q8N148 313 aa8.51□□□□□ -1.05
NR1I3-220ENST00000505005 PACRGLQ8N7B6 248 aa8.51□□□□□ -1.05
NR1I3-220ENST00000505005 SDR9C7Q8NEX9 313 aa8.51□□□□□ -1.05
NR1I3-220ENST00000505005 SLC26A10Q8NG04 563 aa8.51□□□□□ -1.05
NR1I3-220ENST00000505005 OR1J1Q8NGS3 322 aa8.51□□□□□ -1.05
NR1I3-220ENST00000505005 OR1F12Q8NHA8 337 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms