RNA–Protein interactions for RNA: ENST00000504663.1

TPM3-217, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-217ENST00000504663 FGFBP3Q8TAT2 258 aa9.13□□□□□ -0.95
TPM3-217ENST00000504663 DGCR14Q96DF8 476 aaKnown RBP9.13□□□□□ -0.95
TPM3-217ENST00000504663 FBXO17Q96EF6 278 aa9.13□□□□□ -0.95
TPM3-217ENST00000504663 TRIB1Q96RU8 372 aa9.13□□□□□ -0.95
TPM3-217ENST00000504663 CRLF2Q9HC73 371 aa9.13□□□□□ -0.95
TPM3-217ENST00000504663 MALT1Q9UDY8 824 aa9.13□□□□□ -0.95
TPM3-217ENST00000504663 RSL24D1Q9UHA3 163 aaKnown RBP9.13□□□□□ -0.95
TPM3-217ENST00000504663 LAMP5Q9UJQ1 280 aa9.13□□□□□ -0.95
TPM3-217ENST00000504663 GDF2Q9UK05 429 aaPredicted RBP9.13□□□□□ -0.95
TPM3-217ENST00000504663 INTS1Q8N201 2190 aaKnown RBP9.12□□□□□ -0.95
TPM3-217ENST00000504663 METTL15A6NJ78 407 aa9.12□□□□□ -0.95
TPM3-217ENST00000504663 PHYHO14832 338 aa9.12□□□□□ -0.95
TPM3-217ENST00000504663 PLPP2O43688 288 aa9.12□□□□□ -0.95
TPM3-217ENST00000504663 MRPL33O75394 65 aaKnown RBP9.12□□□□□ -0.95
TPM3-217ENST00000504663 IL18BPO95998 194 aa9.12□□□□□ -0.95
TPM3-217ENST00000504663 PNPP00491 289 aa9.12□□□□□ -0.95
TPM3-217ENST00000504663 CD1AP06126 327 aa9.12□□□□□ -0.95
TPM3-217ENST00000504663 MMP7P09237 267 aaPredicted RBP9.12□□□□□ -0.95
TPM3-217ENST00000504663 MSR1P21757 451 aa9.12□□□□□ -0.95
TPM3-217ENST00000504663 RPS11P62280 158 aaKnown RBP eCLIP9.12□□□□□ -0.95
TPM3-217ENST00000504663 ROR2Q01974 943 aaKnown RBP9.12□□□□□ -0.95
TPM3-217ENST00000504663 KLRB1Q12918 225 aa9.12□□□□□ -0.95
TPM3-217ENST00000504663 EIF2B1Q14232 305 aaKnown RBP9.12□□□□□ -0.95
TPM3-217ENST00000504663 INSL4Q14641 139 aa9.12□□□□□ -0.95
TPM3-217ENST00000504663 RSPO1Q2MKA7 263 aaPredicted RBP9.12□□□□□ -0.95
TPM3-217ENST00000504663 KRTAP27-1Q3LI81 207 aa9.12□□□□□ -0.95
TPM3-217ENST00000504663 CCDC92Q53HC0 331 aaPredicted RBP9.12□□□□□ -0.95
TPM3-217ENST00000504663 C1orf185Q5T7R7 199 aa9.12□□□□□ -0.95
TPM3-217ENST00000504663 FAM27BQ5VT28 67 aa9.12□□□□□ -0.95
TPM3-217ENST00000504663 LIPNQ5VXI9 398 aa9.12□□□□□ -0.95
TPM3-217ENST00000504663 VWA1Q6PCB0 445 aa9.12□□□□□ -0.95
TPM3-217ENST00000504663 TMPRSS11AQ6ZMR5 421 aa9.12□□□□□ -0.95
TPM3-217ENST00000504663 ZNF679Q8IYX0 411 aa9.12□□□□□ -0.95
TPM3-217ENST00000504663 GCNT2Q8N0V5 402 aa9.12□□□□□ -0.95
TPM3-217ENST00000504663 GPR137CQ8N3F9 429 aa9.12□□□□□ -0.95
TPM3-217ENST00000504663 PRSS35Q8N3Z0 413 aa9.12□□□□□ -0.95
TPM3-217ENST00000504663 IL17RDQ8NFM7 739 aa9.12□□□□□ -0.95
TPM3-217ENST00000504663 NDNFQ8TB73 568 aa9.12□□□□□ -0.95
TPM3-217ENST00000504663 RAB2BQ8WUD1 216 aa9.12□□□□□ -0.95
TPM3-217ENST00000504663 UFD1Q92890 307 aa9.12□□□□□ -0.95
TPM3-217ENST00000504663 APH1AQ96BI3 265 aa9.12□□□□□ -0.95
TPM3-217ENST00000504663 FOXB1Q99853 325 aa9.12□□□□□ -0.95
TPM3-217ENST00000504663 BCL7BQ9BQE9 202 aa9.12□□□□□ -0.95
TPM3-217ENST00000504663 CENPOQ9BU64 300 aa9.12□□□□□ -0.95
TPM3-217ENST00000504663 PRRG4Q9BZD6 226 aa9.12□□□□□ -0.95
TPM3-217ENST00000504663 SLC25A18Q9H1K4 315 aa9.12□□□□□ -0.95
TPM3-217ENST00000504663 ELOVL3Q9HB03 270 aa9.12□□□□□ -0.95
TPM3-217ENST00000504663 NOX3Q9HBY0 568 aa9.12□□□□□ -0.95
TPM3-217ENST00000504663 TRIM36Q9NQ86 728 aa9.12□□□□□ -0.95
TPM3-217ENST00000504663 GLRX2Q9NS18 164 aa9.12□□□□□ -0.95
TPM3-217ENST00000504663 DDX28Q9NUL7 540 aaKnown RBP9.12□□□□□ -0.95
TPM3-217ENST00000504663 CHCHD3Q9NX63 227 aaKnown RBP9.12□□□□□ -0.95
TPM3-217ENST00000504663 ASH2LQ9UBL3 628 aa9.12□□□□□ -0.95
TPM3-217ENST00000504663 GNG8Q9UK08 70 aa9.12□□□□□ -0.95
TPM3-217ENST00000504663 FBXL3Q9UKT7 428 aa9.12□□□□□ -0.95
TPM3-217ENST00000504663 LRP12Q9Y561 859 aa9.12□□□□□ -0.95
TPM3-217ENST00000504663 TMEM14AQ9Y6G1 99 aa9.12□□□□□ -0.95
TPM3-217ENST00000504663 CACNA1CQ13936 2221 aa9.11□□□□□ -0.95
TPM3-217ENST00000504663 PNMA8CA0A1B0GUJ8 204 aa9.11□□□□□ -0.95
TPM3-217ENST00000504663 A0A1W2PPW3 197 aa9.11□□□□□ -0.95
TPM3-217ENST00000504663 SHISA3A0PJX4 238 aa9.11□□□□□ -0.95
TPM3-217ENST00000504663 OR4C45A6NMZ5 311 aa9.11□□□□□ -0.95
TPM3-217ENST00000504663 HSPB2A8KAH6 182 aa9.11□□□□□ -0.95
TPM3-217ENST00000504663 RER1O15258 196 aa9.11□□□□□ -0.95
TPM3-217ENST00000504663 WDR1O75083 606 aa9.11□□□□□ -0.95
TPM3-217ENST00000504663 CST2P09228 141 aa9.11□□□□□ -0.95
TPM3-217ENST00000504663 B4GALT1P15291 398 aa9.11□□□□□ -0.95
TPM3-217ENST00000504663 CELP19835 753 aa9.11□□□□□ -0.95
TPM3-217ENST00000504663 GABRA5P31644 462 aa9.11□□□□□ -0.95
TPM3-217ENST00000504663 CEACAM8P31997 349 aaPredicted RBP9.11□□□□□ -0.95
TPM3-217ENST00000504663 OTX1P32242 354 aaPredicted RBP9.11□□□□□ -0.95
TPM3-217ENST00000504663 SIRPAP78324 504 aa9.11□□□□□ -0.95
TPM3-217ENST00000504663 FABP5Q01469 135 aa9.11□□□□□ -0.95
TPM3-217ENST00000504663 GPR50Q13585 617 aa9.11□□□□□ -0.95
TPM3-217ENST00000504663 HSPB2Q16082 182 aa9.11□□□□□ -0.95
TPM3-217ENST00000504663 NRN1LQ496H8 165 aa9.11□□□□□ -0.95
TPM3-217ENST00000504663 C4orf48Q5BLP8 95 aa9.11□□□□□ -0.95
TPM3-217ENST00000504663 OR7E24Q6IFN5 339 aa9.11□□□□□ -0.95
TPM3-217ENST00000504663 ZNF585AQ6P3V2 769 aa9.11□□□□□ -0.95
TPM3-217ENST00000504663 KLHL24Q6TFL4 600 aa9.11□□□□□ -0.95
TPM3-217ENST00000504663 FAM214BQ7L5A3 538 aa9.11□□□□□ -0.95
TPM3-217ENST00000504663 CHMP1BQ7LBR1 199 aa9.11□□□□□ -0.95
TPM3-217ENST00000504663 PRSS45Q7RTY3 260 aa9.11□□□□□ -0.95
TPM3-217ENST00000504663 DOLPP1Q86YN1 238 aa9.11□□□□□ -0.95
TPM3-217ENST00000504663 OR13C5Q8NGS8 318 aa9.11□□□□□ -0.95
TPM3-217ENST00000504663 THEM6Q8WUY1 208 aa9.11□□□□□ -0.95
TPM3-217ENST00000504663 SNX33Q8WV41 574 aa9.11□□□□□ -0.95
TPM3-217ENST00000504663 ASB17Q8WXJ9 295 aa9.11□□□□□ -0.95
TPM3-217ENST00000504663 SLAMF6Q96DU3 332 aa9.11□□□□□ -0.95
TPM3-217ENST00000504663 SMIM19Q96E16 107 aa9.11□□□□□ -0.95
TPM3-217ENST00000504663 C4orf45Q96LM5 186 aa9.11□□□□□ -0.95
TPM3-217ENST00000504663 TM9SF2Q99805 663 aa9.11□□□□□ -0.95
TPM3-217ENST00000504663 TTYH2Q9BSA4 534 aa9.11□□□□□ -0.95
TPM3-217ENST00000504663 RBM24Q9BX46 236 aaKnown RBP9.11□□□□□ -0.95
TPM3-217ENST00000504663 PPIL3Q9H2H8 161 aaKnown RBP9.11□□□□□ -0.95
TPM3-217ENST00000504663 C12orf49Q9H741 205 aa9.11□□□□□ -0.95
TPM3-217ENST00000504663 SEC61A2Q9H9S3 476 aa9.11□□□□□ -0.95
TPM3-217ENST00000504663 SIAEQ9HAT2 523 aa9.11□□□□□ -0.95
TPM3-217ENST00000504663 G6PC2Q9NQR9 355 aa9.11□□□□□ -0.95
TPM3-217ENST00000504663 PARPBPQ9NWS1 579 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms