RNA–Protein interactions for RNA: ENST00000504078.1

USP46-205, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 4

Gene USP46, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-205ENST00000504078 ZNF718Q3SXZ3 478 aa2.99□□□□□ -1.93
USP46-205ENST00000504078 SLC36A2Q495M3 483 aa2.99□□□□□ -1.93
USP46-205ENST00000504078 NRN1LQ496H8 165 aa2.99□□□□□ -1.93
USP46-205ENST00000504078 TMEM155Q4W5P6 130 aa2.99□□□□□ -1.93
USP46-205ENST00000504078 PLA1AQ53H76 456 aa2.99□□□□□ -1.93
USP46-205ENST00000504078 MTX3Q5HYI7 312 aa2.99□□□□□ -1.93
USP46-205ENST00000504078 ALG10BQ5I7T1 473 aa2.99□□□□□ -1.93
USP46-205ENST00000504078 FAM69AQ5T7M9 428 aa2.99□□□□□ -1.93
USP46-205ENST00000504078 PRAMEF6Q5VXH4 476 aa2.99□□□□□ -1.93
USP46-205ENST00000504078 SLC27A4Q6P1M0 643 aa2.99□□□□□ -1.93
USP46-205ENST00000504078 DUX4L9Q6RFH8 374 aaPredicted RBP2.99□□□□□ -1.93
USP46-205ENST00000504078 LRRN1Q6UXK5 716 aa2.99□□□□□ -1.93
USP46-205ENST00000504078 LRRC74BQ6ZQY2 392 aa2.99□□□□□ -1.93
USP46-205ENST00000504078 Q6ZTK2 550 aa2.99□□□□□ -1.93
USP46-205ENST00000504078 H1FNTQ75WM6 255 aaPredicted RBP2.99□□□□□ -1.93
USP46-205ENST00000504078 PIWIL3Q7Z3Z3 882 aaKnown RBP2.99□□□□□ -1.93
USP46-205ENST00000504078 RANBP3LQ86VV4 465 aaPredicted RBP2.99□□□□□ -1.93
USP46-205ENST00000504078 NUDCD3Q8IVD9 361 aa2.99□□□□□ -1.93
USP46-205ENST00000504078 ZNF283Q8N7M2 679 aa2.99□□□□□ -1.93
USP46-205ENST00000504078 CLDN22Q8N7P3 220 aa2.99□□□□□ -1.93
USP46-205ENST00000504078 LINC00482Q8N8I6 264 aa2.99□□□□□ -1.93
USP46-205ENST00000504078 SCAIQ8N9R8 606 aa2.99□□□□□ -1.93
USP46-205ENST00000504078 ATG16L2Q8NAA4 619 aa2.99□□□□□ -1.93
USP46-205ENST00000504078 HIPK4Q8NE63 616 aa2.99□□□□□ -1.93
USP46-205ENST00000504078 VPS37AQ8NEZ2 397 aa2.99□□□□□ -1.93
USP46-205ENST00000504078 NOXO1Q8NFA2 376 aa2.99□□□□□ -1.93
USP46-205ENST00000504078 MIPOL1Q8TD10 442 aa2.99□□□□□ -1.93
USP46-205ENST00000504078 AENQ8WTP8 325 aaKnown RBP2.99□□□□□ -1.93
USP46-205ENST00000504078 RAB40AQ8WXH6 277 aa2.99□□□□□ -1.93
USP46-205ENST00000504078 SLC7A6Q92536 515 aa2.99□□□□□ -1.93
USP46-205ENST00000504078 DYRK2Q92630 601 aa2.99□□□□□ -1.93
USP46-205ENST00000504078 TMEM54Q969K7 222 aa2.99□□□□□ -1.93
USP46-205ENST00000504078 MAL2Q969L2 176 aa2.99□□□□□ -1.93
USP46-205ENST00000504078 NEIL1Q96FI4 390 aaPredicted RBP2.99□□□□□ -1.93
USP46-205ENST00000504078 TMEM19Q96HH6 336 aa2.99□□□□□ -1.93
USP46-205ENST00000504078 TRNT1Q96Q11 434 aaKnown RBP2.99□□□□□ -1.93
USP46-205ENST00000504078 WFDC6Q9BQY6 131 aa2.99□□□□□ -1.93
USP46-205ENST00000504078 FUT8Q9BYC5 575 aa2.99□□□□□ -1.93
USP46-205ENST00000504078 BCL2L14Q9BZR8 327 aa2.99□□□□□ -1.93
USP46-205ENST00000504078 PRDM13Q9H4Q3 707 aa2.99□□□□□ -1.93
USP46-205ENST00000504078 WDR76Q9H967 626 aa2.99□□□□□ -1.93
USP46-205ENST00000504078 PPCSQ9HAB8 311 aa2.99□□□□□ -1.93
USP46-205ENST00000504078 CACYBPQ9HB71 228 aaKnown RBP2.99□□□□□ -1.93
USP46-205ENST00000504078 CCNB1IP1Q9NPC3 277 aa2.99□□□□□ -1.93
USP46-205ENST00000504078 POLE3Q9NRF9 147 aa2.99□□□□□ -1.93
USP46-205ENST00000504078 ACOXLQ9NUZ1 547 aa2.99□□□□□ -1.93
USP46-205ENST00000504078 GLTPQ9NZD2 209 aa2.99□□□□□ -1.93
USP46-205ENST00000504078 PTTG3PQ9NZH4 202 aa2.99□□□□□ -1.93
USP46-205ENST00000504078 ONECUT1Q9UBC0 465 aa2.99□□□□□ -1.93
USP46-205ENST00000504078 P2RX2Q9UBL9 471 aa2.99□□□□□ -1.93
USP46-205ENST00000504078 DUX4Q9UBX2 424 aa2.99□□□□□ -1.93
USP46-205ENST00000504078 CLN8Q9UBY8 286 aa2.99□□□□□ -1.93
USP46-205ENST00000504078 NIPSNAP3AQ9UFN0 247 aaPredicted RBP2.99□□□□□ -1.93
USP46-205ENST00000504078 VPREB3Q9UKI3 123 aa2.99□□□□□ -1.93
USP46-205ENST00000504078 TMCC3Q9ULS5 477 aa2.99□□□□□ -1.93
USP46-205ENST00000504078 PPP1R3CQ9UQK1 317 aa2.99□□□□□ -1.93
USP46-205ENST00000504078 NUP214P35658 2090 aaPredicted RBP2.98□□□□□ -1.93
USP46-205ENST00000504078 IGHV3OR15-7A0A075B7D8 119 aa2.98□□□□□ -1.93
USP46-205ENST00000504078 IGHV1-69DA0A0B4J2H0 117 aa2.98□□□□□ -1.93
USP46-205ENST00000504078 A0A1W2PPL8 197 aa2.98□□□□□ -1.93
USP46-205ENST00000504078 ELOVL7A1L3X0 281 aa2.98□□□□□ -1.93
USP46-205ENST00000504078 BTBD17A6NE02 478 aa2.98□□□□□ -1.93
USP46-205ENST00000504078 C9orf118A6NHY6 69 aa2.98□□□□□ -1.93
USP46-205ENST00000504078 CCDC154A6NI56 674 aa2.98□□□□□ -1.93
USP46-205ENST00000504078 PRSS47A8MTI9 375 aa2.98□□□□□ -1.93
USP46-205ENST00000504078 MCIDASD6RGH6 385 aa2.98□□□□□ -1.93
USP46-205ENST00000504078 E9PBE3 544 aa2.98□□□□□ -1.93
USP46-205ENST00000504078 F5H5P2 479 aa2.98□□□□□ -1.93
USP46-205ENST00000504078 H3BUX3 64 aa2.98□□□□□ -1.93
USP46-205ENST00000504078 H7C1C5 153 aa2.98□□□□□ -1.93
USP46-205ENST00000504078 PLPP3O14495 311 aa2.98□□□□□ -1.93
USP46-205ENST00000504078 COPEO14579 308 aa2.98□□□□□ -1.93
USP46-205ENST00000504078 TNFRSF13BO14836 293 aaPredicted RBP2.98□□□□□ -1.93
USP46-205ENST00000504078 DHHO43323 396 aa2.98□□□□□ -1.93
USP46-205ENST00000504078 RIPK2O43353 540 aa2.98□□□□□ -1.93
USP46-205ENST00000504078 RNF13O43567 381 aa2.98□□□□□ -1.93
USP46-205ENST00000504078 ENSAO43768 121 aaKnown RBP2.98□□□□□ -1.93
USP46-205ENST00000504078 MGRN1O60291 552 aa2.98□□□□□ -1.93
USP46-205ENST00000504078 OR10H3O60404 316 aa2.98□□□□□ -1.93
USP46-205ENST00000504078 SPAG7O75391 227 aa2.98□□□□□ -1.93
USP46-205ENST00000504078 FCN3O75636 299 aa2.98□□□□□ -1.93
USP46-205ENST00000504078 FARS2O95363 451 aaKnown RBP2.98□□□□□ -1.93
USP46-205ENST00000504078 PPP1R3DO95685 299 aa2.98□□□□□ -1.93
USP46-205ENST00000504078 SNAP29O95721 258 aa2.98□□□□□ -1.93
USP46-205ENST00000504078 ABHD16AO95870 558 aa2.98□□□□□ -1.93
USP46-205ENST00000504078 AGR2O95994 175 aa2.98□□□□□ -1.93
USP46-205ENST00000504078 IGHV1-69P01742 117 aa2.98□□□□□ -1.93
USP46-205ENST00000504078 TFF1P04155 84 aa2.98□□□□□ -1.93
USP46-205ENST00000504078 CD55P08174 381 aa2.98□□□□□ -1.93
USP46-205ENST00000504078 MMP7P09237 267 aaPredicted RBP2.98□□□□□ -1.93
USP46-205ENST00000504078 WNT2P09544 360 aa2.98□□□□□ -1.93
USP46-205ENST00000504078 FAM153BP0C7A2 387 aa2.98□□□□□ -1.93
USP46-205ENST00000504078 CCDC159P0C7I6 412 aa2.98□□□□□ -1.93
USP46-205ENST00000504078 PGA4P0DJD7 388 aa2.98□□□□□ -1.93
USP46-205ENST00000504078 PGA3P0DJD8 388 aa2.98□□□□□ -1.93
USP46-205ENST00000504078 MMP9P14780 707 aa2.98□□□□□ -1.93
USP46-205ENST00000504078 TNFSF4P23510 183 aa2.98□□□□□ -1.93
USP46-205ENST00000504078 PAX7P23759 505 aa2.98□□□□□ -1.93
USP46-205ENST00000504078 SLC6A2P23975 617 aa2.98□□□□□ -1.93
USP46-205ENST00000504078 FKBP2P26885 142 aaKnown RBP2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms