RNA–Protein interactions for RNA: ENST00000503742.5

UBE2D3-216, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 1 (best)

Gene UBE2D3, Length 1,977 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-216ENST00000503742 CALCBP10092 127 aa18.94■□□□□ 0.62
UBE2D3-216ENST00000503742 DCTDP32321 178 aa18.94■□□□□ 0.62
UBE2D3-216ENST00000503742 MMP16P51512 607 aa18.94■□□□□ 0.62
UBE2D3-216ENST00000503742 ZNF133P52736 654 aaPredicted RBP18.94■□□□□ 0.62
UBE2D3-216ENST00000503742 CLDN20P56880 219 aa18.94■□□□□ 0.62
UBE2D3-216ENST00000503742 CD300CQ08708 224 aa18.94■□□□□ 0.62
UBE2D3-216ENST00000503742 ABHD17BQ5VST6 288 aa18.94■□□□□ 0.62
UBE2D3-216ENST00000503742 ASPHD2Q6ICH7 369 aa18.94■□□□□ 0.62
UBE2D3-216ENST00000503742 SPINK14Q6IE38 97 aa18.94■□□□□ 0.62
UBE2D3-216ENST00000503742 ASB18Q6ZVZ8 466 aa18.94■□□□□ 0.62
UBE2D3-216ENST00000503742 GGNQ86UU5 652 aa18.94■□□□□ 0.62
UBE2D3-216ENST00000503742 CHAC2Q8WUX2 184 aa18.94■□□□□ 0.62
UBE2D3-216ENST00000503742 ASB5Q8WWX0 329 aa18.94■□□□□ 0.62
UBE2D3-216ENST00000503742 SLC39A7Q92504 469 aa18.94■□□□□ 0.62
UBE2D3-216ENST00000503742 TMEM54Q969K7 222 aa18.94■□□□□ 0.62
UBE2D3-216ENST00000503742 OR2M2Q96R28 347 aa18.94■□□□□ 0.62
UBE2D3-216ENST00000503742 SEC61A2Q9H9S3 476 aa18.94■□□□□ 0.62
UBE2D3-216ENST00000503742 EMC7Q9NPA0 242 aa18.94■□□□□ 0.62
UBE2D3-216ENST00000503742 CENPMQ9NSP4 180 aa18.94■□□□□ 0.62
UBE2D3-216ENST00000503742 GLTPQ9NZD2 209 aa18.94■□□□□ 0.62
UBE2D3-216ENST00000503742 TMEM269A0A1B0GVZ9 245 aa18.93■□□□□ 0.62
UBE2D3-216ENST00000503742 H0YC42 278 aa18.93■□□□□ 0.62
UBE2D3-216ENST00000503742 CFPP27918 469 aa18.93■□□□□ 0.62
UBE2D3-216ENST00000503742 CDAP32320 146 aa18.93■□□□□ 0.62
UBE2D3-216ENST00000503742 CMTM4Q8IZR5 234 aa18.93■□□□□ 0.62
UBE2D3-216ENST00000503742 DEFB124Q8NES8 71 aa18.93■□□□□ 0.62
UBE2D3-216ENST00000503742 ZC3HAV1LQ96H79 300 aaKnown RBP18.93■□□□□ 0.62
UBE2D3-216ENST00000503742 ZNF385AQ96PM9 386 aaKnown RBP18.93■□□□□ 0.62
UBE2D3-216ENST00000503742 THAP7Q9BT49 309 aaPredicted RBP18.93■□□□□ 0.62
UBE2D3-216ENST00000503742 GDF2Q9UK05 429 aaPredicted RBP18.93■□□□□ 0.62
UBE2D3-216ENST00000503742 CAMK2AQ9UQM7 478 aa18.93■□□□□ 0.62
UBE2D3-216ENST00000503742 PHF3Q92576 2039 aaKnown RBP18.93■□□□□ 0.62
UBE2D3-216ENST00000503742 NPIPA2E9PIF3 369 aa18.93■□□□□ 0.62
UBE2D3-216ENST00000503742 NPIPA3F8WFD2 350 aa18.93■□□□□ 0.62
UBE2D3-216ENST00000503742 LANCL1O43813 399 aa18.93■□□□□ 0.62
UBE2D3-216ENST00000503742 MAS1P04201 325 aa18.93■□□□□ 0.62
UBE2D3-216ENST00000503742 NR2C1P13056 603 aa18.93■□□□□ 0.62
UBE2D3-216ENST00000503742 ENPP1P22413 925 aa18.93■□□□□ 0.62
UBE2D3-216ENST00000503742 KIR2DL3P43628 341 aa18.93■□□□□ 0.62
UBE2D3-216ENST00000503742 MAP2K3P46734 347 aa18.93■□□□□ 0.62
UBE2D3-216ENST00000503742 AIMP2Q13155 320 aaKnown RBP18.93■□□□□ 0.62
UBE2D3-216ENST00000503742 STPG1Q5TH74 334 aa18.93■□□□□ 0.62
UBE2D3-216ENST00000503742 BAIAP2L2Q6UXY1 529 aa18.93■□□□□ 0.62
UBE2D3-216ENST00000503742 CFAP77Q6ZQR2 320 aa18.93■□□□□ 0.62
UBE2D3-216ENST00000503742 ESPNLQ6ZVH7 1005 aa18.93■□□□□ 0.62
UBE2D3-216ENST00000503742 HIST2H2ABQ8IUE6 130 aaPredicted RBP18.93■□□□□ 0.62
UBE2D3-216ENST00000503742 TMEM123Q8N131 208 aa18.93■□□□□ 0.62
UBE2D3-216ENST00000503742 ZIC4Q8N9L1 334 aa18.93■□□□□ 0.62
UBE2D3-216ENST00000503742 DNAAF1Q8NEP3 725 aa18.93■□□□□ 0.62
UBE2D3-216ENST00000503742 HPS1Q92902 700 aa18.93■□□□□ 0.62
UBE2D3-216ENST00000503742 RFT1Q96AA3 541 aa18.93■□□□□ 0.62
UBE2D3-216ENST00000503742 SLC25A38Q96DW6 304 aa18.93■□□□□ 0.62
UBE2D3-216ENST00000503742 RBFOX1Q9NWB1 397 aaKnown RBP18.93■□□□□ 0.62
UBE2D3-216ENST00000503742 FAM206AQ9NX38 181 aa18.93■□□□□ 0.62
UBE2D3-216ENST00000503742 OR5V1Q9UGF6 321 aa18.93■□□□□ 0.62
UBE2D3-216ENST00000503742 DHDHQ9UQ10 334 aa18.93■□□□□ 0.62
UBE2D3-216ENST00000503742 TTLL8A6PVC2 850 aa18.92■□□□□ 0.62
UBE2D3-216ENST00000503742 IQCJ-SCHIP1C9J366 451 aaPredicted RBP18.92■□□□□ 0.62
UBE2D3-216ENST00000503742 EIF1AYO14602 144 aaKnown RBP18.92■□□□□ 0.62
UBE2D3-216ENST00000503742 SMAD9O15198 467 aaKnown RBP18.92■□□□□ 0.62
UBE2D3-216ENST00000503742 FAM157BP0CG42 384 aa18.92■□□□□ 0.62
UBE2D3-216ENST00000503742 CSRP1P21291 193 aaKnown RBP18.92■□□□□ 0.62
UBE2D3-216ENST00000503742 ACHEP22303 614 aa18.92■□□□□ 0.62
UBE2D3-216ENST00000503742 CLDN12P56749 244 aa18.92■□□□□ 0.62
UBE2D3-216ENST00000503742 C10orf128Q5T292 105 aa18.92■□□□□ 0.62
UBE2D3-216ENST00000503742 ZNF704Q6ZNC4 412 aaPredicted RBP18.92■□□□□ 0.62
UBE2D3-216ENST00000503742 RHOUQ7L0Q8 258 aa18.92■□□□□ 0.62
UBE2D3-216ENST00000503742 FCRLAQ7L513 359 aa18.92■□□□□ 0.62
UBE2D3-216ENST00000503742 ADGRG7Q96K78 797 aa18.92■□□□□ 0.62
UBE2D3-216ENST00000503742 SIGLEC12Q96PQ1 595 aa18.92■□□□□ 0.62
UBE2D3-216ENST00000503742 SF3B5Q9BWJ5 86 aaKnown RBP18.92■□□□□ 0.62
UBE2D3-216ENST00000503742 BOKQ9UMX3 212 aaPredicted RBP18.92■□□□□ 0.62
UBE2D3-216ENST00000503742 ANXA2P2A6NMY6 339 aa18.92■□□□□ 0.62
UBE2D3-216ENST00000503742 LYRM1O43325 122 aa18.92■□□□□ 0.62
UBE2D3-216ENST00000503742 ANXA2P07355 339 aaKnown RBP18.92■□□□□ 0.62
UBE2D3-216ENST00000503742 ADRB1P08588 477 aa18.92■□□□□ 0.62
UBE2D3-216ENST00000503742 FTH1P19P0C7X4 201 aa18.92■□□□□ 0.62
UBE2D3-216ENST00000503742 PRKAR1AP10644 381 aa18.92■□□□□ 0.62
UBE2D3-216ENST00000503742 ITGA3P26006 1051 aa18.92■□□□□ 0.62
UBE2D3-216ENST00000503742 CASRP41180 1078 aa18.92■□□□□ 0.62
UBE2D3-216ENST00000503742 EIF1AXP47813 144 aaKnown RBP18.92■□□□□ 0.62
UBE2D3-216ENST00000503742 CSNK1A1P48729 337 aa18.92■□□□□ 0.62
UBE2D3-216ENST00000503742 MMP15P51511 669 aa18.92■□□□□ 0.62
UBE2D3-216ENST00000503742 SUCLG1P53597 346 aaKnown RBP18.92■□□□□ 0.62
UBE2D3-216ENST00000503742 WIPI1Q5MNZ9 446 aaPredicted RBP18.92■□□□□ 0.62
UBE2D3-216ENST00000503742 TMPRSS12Q86WS5 348 aa18.92■□□□□ 0.62
UBE2D3-216ENST00000503742 UBE2J2Q8N2K1 259 aa18.92■□□□□ 0.62
UBE2D3-216ENST00000503742 SFXN2Q96NB2 322 aa18.92■□□□□ 0.62
UBE2D3-216ENST00000503742 FAM173AQ9BQD7 235 aa18.92■□□□□ 0.62
UBE2D3-216ENST00000503742 UTP23Q9BRU9 249 aaKnown RBP18.92■□□□□ 0.62
UBE2D3-216ENST00000503742 MMP28Q9H239 520 aa18.92■□□□□ 0.62
UBE2D3-216ENST00000503742 HHLA2Q9UM44 414 aa18.92■□□□□ 0.62
UBE2D3-216ENST00000503742 TRAPPC6AO75865 159 aa18.91■□□□□ 0.62
UBE2D3-216ENST00000503742 GDF1P27539 372 aa18.91■□□□□ 0.62
UBE2D3-216ENST00000503742 PITPNAQ00169 270 aa18.91■□□□□ 0.62
UBE2D3-216ENST00000503742 PHYHD1Q5SRE7 291 aa18.91■□□□□ 0.62
UBE2D3-216ENST00000503742 MZT2BQ6NZ67 158 aa18.91■□□□□ 0.62
UBE2D3-216ENST00000503742 FOXL2NBQ6ZUU3 175 aa18.91■□□□□ 0.62
UBE2D3-216ENST00000503742 DTX1Q86Y01 620 aa18.91■□□□□ 0.62
UBE2D3-216ENST00000503742 UBQLNLQ8IYU4 475 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms