RNA–Protein interactions for RNA: ENST00000503338.5

TOPBP1-202, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 3

Gene TOPBP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-202ENST00000503338 ALKBH3Q96Q83 286 aaPredicted RBP7.17□□□□□ -1.26
TOPBP1-202ENST00000503338 TSC22D3Q99576 134 aa7.17□□□□□ -1.26
TOPBP1-202ENST00000503338 MED18Q9BUE0 208 aa7.17□□□□□ -1.26
TOPBP1-202ENST00000503338 SLC25A18Q9H1K4 315 aa7.17□□□□□ -1.26
TOPBP1-202ENST00000503338 OR51E2Q9H255 320 aa7.17□□□□□ -1.26
TOPBP1-202ENST00000503338 DCSTAMPQ9H295 470 aa7.17□□□□□ -1.26
TOPBP1-202ENST00000503338 PRORYQ9H606 182 aa7.17□□□□□ -1.26
TOPBP1-202ENST00000503338 SP140LQ9H930 580 aa7.17□□□□□ -1.26
TOPBP1-202ENST00000503338 ZNF71Q9NQZ8 489 aaPredicted RBP7.17□□□□□ -1.26
TOPBP1-202ENST00000503338 TMEM38BQ9NVV0 291 aa7.17□□□□□ -1.26
TOPBP1-202ENST00000503338 SLCO1C1Q9NYB5 712 aa7.17□□□□□ -1.26
TOPBP1-202ENST00000503338 CCDC59Q9P031 241 aaKnown RBP7.17□□□□□ -1.26
TOPBP1-202ENST00000503338 ASH2LQ9UBL3 628 aa7.17□□□□□ -1.26
TOPBP1-202ENST00000503338 MALT1Q9UDY8 824 aa7.17□□□□□ -1.26
TOPBP1-202ENST00000503338 ATPIF1Q9UII2 106 aa7.17□□□□□ -1.26
TOPBP1-202ENST00000503338 ZNF281Q9Y2X9 895 aa7.17□□□□□ -1.26
TOPBP1-202ENST00000503338 R4GMQ9 66 aa7.17□□□□□ -1.26
TOPBP1-202ENST00000503338 A3GALT2U3KPV4 340 aa7.17□□□□□ -1.26
TOPBP1-202ENST00000503338 PTPRQQ9UMZ3 2332 aa7.17□□□□□ -1.26
TOPBP1-202ENST00000503338 CFAP54Q96N23 3096 aa7.16□□□□□ -1.26
TOPBP1-202ENST00000503338 PNMA8CA0A1B0GUJ8 204 aa7.16□□□□□ -1.26
TOPBP1-202ENST00000503338 A0A1W2PPW3 197 aa7.16□□□□□ -1.26
TOPBP1-202ENST00000503338 E9PI62 339 aa7.16□□□□□ -1.26
TOPBP1-202ENST00000503338 GABRPO00591 440 aa7.16□□□□□ -1.26
TOPBP1-202ENST00000503338 GPX5O75715 221 aa7.16□□□□□ -1.26
TOPBP1-202ENST00000503338 ARL6IP5O75915 188 aa7.16□□□□□ -1.26
TOPBP1-202ENST00000503338 RPP14O95059 124 aaKnown RBP7.16□□□□□ -1.26
TOPBP1-202ENST00000503338 IL1AP01583 271 aa7.16□□□□□ -1.26
TOPBP1-202ENST00000503338 IL2RAP01589 272 aa7.16□□□□□ -1.26
TOPBP1-202ENST00000503338 RAF1P04049 648 aa7.16□□□□□ -1.26
TOPBP1-202ENST00000503338 TPOP07202 933 aa7.16□□□□□ -1.26
TOPBP1-202ENST00000503338 FAM87AP0C7U9 286 aa7.16□□□□□ -1.26
TOPBP1-202ENST00000503338 HOXB1P14653 301 aaPredicted RBP7.16□□□□□ -1.26
TOPBP1-202ENST00000503338 ABOP16442 354 aa7.16□□□□□ -1.26
TOPBP1-202ENST00000503338 MYL9P24844 172 aa7.16□□□□□ -1.26
TOPBP1-202ENST00000503338 CTSSP25774 331 aa7.16□□□□□ -1.26
TOPBP1-202ENST00000503338 NTF4P34130 210 aa7.16□□□□□ -1.26
TOPBP1-202ENST00000503338 PER3P56645 1201 aa7.16□□□□□ -1.26
TOPBP1-202ENST00000503338 LSM3P62310 102 aaKnown RBP7.16□□□□□ -1.26
TOPBP1-202ENST00000503338 RPS25P62851 125 aaKnown RBP7.16□□□□□ -1.26
TOPBP1-202ENST00000503338 HIST1H3AP68431 136 aa7.16□□□□□ -1.26
TOPBP1-202ENST00000503338 SLC3A1Q07837 685 aa7.16□□□□□ -1.26
TOPBP1-202ENST00000503338 DBPQ10586 325 aaPredicted RBP7.16□□□□□ -1.26
TOPBP1-202ENST00000503338 ENDOGQ14249 297 aaKnown RBP7.16□□□□□ -1.26
TOPBP1-202ENST00000503338 GUSBP1Q15486 140 aa7.16□□□□□ -1.26
TOPBP1-202ENST00000503338 SLC36A2Q495M3 483 aa7.16□□□□□ -1.26
TOPBP1-202ENST00000503338 PHYHD1Q5SRE7 291 aa7.16□□□□□ -1.26
TOPBP1-202ENST00000503338 C1QTNF12Q5T7M4 302 aa7.16□□□□□ -1.26
TOPBP1-202ENST00000503338 C1orf185Q5T7R7 199 aa7.16□□□□□ -1.26
TOPBP1-202ENST00000503338 HIST2H3PS2Q5TEC6 136 aa7.16□□□□□ -1.26
TOPBP1-202ENST00000503338 OR7E24Q6IFN5 339 aa7.16□□□□□ -1.26
TOPBP1-202ENST00000503338 ZNF585AQ6P3V2 769 aa7.16□□□□□ -1.26
TOPBP1-202ENST00000503338 LRRN1Q6UXK5 716 aa7.16□□□□□ -1.26
TOPBP1-202ENST00000503338 ZNF704Q6ZNC4 412 aaPredicted RBP7.16□□□□□ -1.26
TOPBP1-202ENST00000503338 HIST2H3AQ71DI3 136 aa7.16□□□□□ -1.26
TOPBP1-202ENST00000503338 SLC16A14Q7RTX9 510 aa7.16□□□□□ -1.26
TOPBP1-202ENST00000503338 TPRA1Q86W33 373 aa7.16□□□□□ -1.26
TOPBP1-202ENST00000503338 CROCCP3Q8IVE0 287 aa7.16□□□□□ -1.26
TOPBP1-202ENST00000503338 LINC00346Q8IVM7 164 aa7.16□□□□□ -1.26
TOPBP1-202ENST00000503338 UBE2J2Q8N2K1 259 aa7.16□□□□□ -1.26
TOPBP1-202ENST00000503338 SLC22A24Q8N4F4 322 aa7.16□□□□□ -1.26
TOPBP1-202ENST00000503338 RFLNBQ8N5W9 214 aa7.16□□□□□ -1.26
TOPBP1-202ENST00000503338 ZFP41Q8N8Y5 198 aa7.16□□□□□ -1.26
TOPBP1-202ENST00000503338 Q8NA96 180 aa7.16□□□□□ -1.26
TOPBP1-202ENST00000503338 OR5M9Q8NGP3 310 aa7.16□□□□□ -1.26
TOPBP1-202ENST00000503338 OR2G2Q8NGZ5 317 aa7.16□□□□□ -1.26
TOPBP1-202ENST00000503338 ABHD4Q8TB40 342 aa7.16□□□□□ -1.26
TOPBP1-202ENST00000503338 NANOS1Q8WY41 292 aaKnown RBP7.16□□□□□ -1.26
TOPBP1-202ENST00000503338 GHSRQ92847 366 aa7.16□□□□□ -1.26
TOPBP1-202ENST00000503338 TMEM203Q969S6 136 aa7.16□□□□□ -1.26
TOPBP1-202ENST00000503338 SPTSSAQ969W0 71 aa7.16□□□□□ -1.26
TOPBP1-202ENST00000503338 SLX1AQ9BQ83 275 aa7.16□□□□□ -1.26
TOPBP1-202ENST00000503338 CENPOQ9BU64 300 aa7.16□□□□□ -1.26
TOPBP1-202ENST00000503338 TMED9Q9BVK6 235 aa7.16□□□□□ -1.26
TOPBP1-202ENST00000503338 ZNF416Q9BWM5 594 aa7.16□□□□□ -1.26
TOPBP1-202ENST00000503338 TTTY10Q9BZA0 68 aa7.16□□□□□ -1.26
TOPBP1-202ENST00000503338 HDHD2Q9H0R4 259 aa7.16□□□□□ -1.26
TOPBP1-202ENST00000503338 TP63Q9H3D4 680 aaPredicted RBP7.16□□□□□ -1.26
TOPBP1-202ENST00000503338 OCEL1Q9H607 264 aa7.16□□□□□ -1.26
TOPBP1-202ENST00000503338 SLC7A10Q9NS82 523 aa7.16□□□□□ -1.26
TOPBP1-202ENST00000503338 CENPMQ9NSP4 180 aa7.16□□□□□ -1.26
TOPBP1-202ENST00000503338 DDX28Q9NUL7 540 aaKnown RBP7.16□□□□□ -1.26
TOPBP1-202ENST00000503338 TXNL4BQ9NX01 149 aaKnown RBP7.16□□□□□ -1.26
TOPBP1-202ENST00000503338 KLHDC2Q9Y2U9 406 aa7.16□□□□□ -1.26
TOPBP1-202ENST00000503338 LRP12Q9Y561 859 aa7.16□□□□□ -1.26
TOPBP1-202ENST00000503338 TIMM10BQ9Y5J6 103 aa7.16□□□□□ -1.26
TOPBP1-202ENST00000503338 LHFPL6Q9Y693 200 aa7.16□□□□□ -1.26
TOPBP1-202ENST00000503338 TMEM269A0A1B0GVZ9 245 aa7.15□□□□□ -1.26
TOPBP1-202ENST00000503338 PRR32B1ATL7 298 aa7.15□□□□□ -1.26
TOPBP1-202ENST00000503338 ZNF879B4DU55 563 aa7.15□□□□□ -1.26
TOPBP1-202ENST00000503338 LOC110117498-PIK3R3F6TDL0 507 aa7.15□□□□□ -1.26
TOPBP1-202ENST00000503338 ERVH48-1M5A8F1 160 aa7.15□□□□□ -1.26
TOPBP1-202ENST00000503338 PSMD9O00233 223 aa7.15□□□□□ -1.26
TOPBP1-202ENST00000503338 TMEM127O75204 238 aa7.15□□□□□ -1.26
TOPBP1-202ENST00000503338 SC5DO75845 299 aa7.15□□□□□ -1.26
TOPBP1-202ENST00000503338 UBCP0CG48 685 aaKnown RBP7.15□□□□□ -1.26
TOPBP1-202ENST00000503338 CD8BP10966 210 aa7.15□□□□□ -1.26
TOPBP1-202ENST00000503338 ZNF12P17014 697 aa7.15□□□□□ -1.26
TOPBP1-202ENST00000503338 ZNF182P17025 639 aaPredicted RBP7.15□□□□□ -1.26
TOPBP1-202ENST00000503338 NR4A1P22736 598 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms