RNA–Protein interactions for RNA: ENST00000502998.1

CLCN3-203, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-203ENST00000502998 FGF16O43320 207 aa5.89□□□□□ -1.47
CLCN3-203ENST00000502998 LRATO95237 230 aa5.89□□□□□ -1.47
CLCN3-203ENST00000502998 ZIC2O95409 532 aaPredicted RBP5.89□□□□□ -1.47
CLCN3-203ENST00000502998 NFATC1O95644 943 aa5.89□□□□□ -1.47
CLCN3-203ENST00000502998 TFP02787 698 aa5.89□□□□□ -1.47
CLCN3-203ENST00000502998 CFIP05156 583 aa5.89□□□□□ -1.47
CLCN3-203ENST00000502998 SYPP08247 313 aa5.89□□□□□ -1.47
CLCN3-203ENST00000502998 FGF3P11487 239 aaPredicted RBP5.89□□□□□ -1.47
CLCN3-203ENST00000502998 FGF5P12034 268 aa5.89□□□□□ -1.47
CLCN3-203ENST00000502998 FABP4P15090 132 aa5.89□□□□□ -1.47
CLCN3-203ENST00000502998 IL9P15248 144 aa5.89□□□□□ -1.47
CLCN3-203ENST00000502998 CXCL3P19876 107 aa5.89□□□□□ -1.47
CLCN3-203ENST00000502998 AGXTP21549 392 aa5.89□□□□□ -1.47
CLCN3-203ENST00000502998 KITLGP21583 273 aa5.89□□□□□ -1.47
CLCN3-203ENST00000502998 SAT1P21673 171 aa5.89□□□□□ -1.47
CLCN3-203ENST00000502998 KLRC2P26717 231 aa5.89□□□□□ -1.47
CLCN3-203ENST00000502998 KDELR2P33947 212 aa5.89□□□□□ -1.47
CLCN3-203ENST00000502998 DLSTP36957 453 aa5.89□□□□□ -1.47
CLCN3-203ENST00000502998 GATA4P43694 442 aa5.89□□□□□ -1.47
CLCN3-203ENST00000502998 RPL29P47914 159 aaKnown RBP5.89□□□□□ -1.47
CLCN3-203ENST00000502998 ZNF84P51523 738 aa5.89□□□□□ -1.47
CLCN3-203ENST00000502998 PNLIPRP2P54317 469 aa5.89□□□□□ -1.47
CLCN3-203ENST00000502998 MFAP4P55083 255 aa5.89□□□□□ -1.47
CLCN3-203ENST00000502998 SESN2P58004 480 aaPredicted RBP5.89□□□□□ -1.47
CLCN3-203ENST00000502998 TAS2R41P59536 307 aa5.89□□□□□ -1.47
CLCN3-203ENST00000502998 PPIAP62937 165 aaKnown RBP5.89□□□□□ -1.47
CLCN3-203ENST00000502998 NAAAQ02083 359 aa5.89□□□□□ -1.47
CLCN3-203ENST00000502998 HGFACQ04756 655 aa5.89□□□□□ -1.47
CLCN3-203ENST00000502998 DMWDQ09019 674 aa5.89□□□□□ -1.47
CLCN3-203ENST00000502998 ZNF763Q0D2J5 394 aa5.89□□□□□ -1.47
CLCN3-203ENST00000502998 EBPQ15125 230 aaKnown RBP5.89□□□□□ -1.47
CLCN3-203ENST00000502998 NTRK2Q16620 822 aa5.89□□□□□ -1.47
CLCN3-203ENST00000502998 ODF4Q2M2E3 257 aa5.89□□□□□ -1.47
CLCN3-203ENST00000502998 PRRT3Q5FWE3 981 aa5.89□□□□□ -1.47
CLCN3-203ENST00000502998 PHF19Q5T6S3 580 aa5.89□□□□□ -1.47
CLCN3-203ENST00000502998 TMEM268Q5VZI3 342 aa5.89□□□□□ -1.47
CLCN3-203ENST00000502998 LILRA6Q6PI73 481 aa5.89□□□□□ -1.47
CLCN3-203ENST00000502998 INO80CQ6PI98 192 aaPredicted RBP5.89□□□□□ -1.47
CLCN3-203ENST00000502998 WDR74Q6RFH5 385 aaPredicted RBP5.89□□□□□ -1.47
CLCN3-203ENST00000502998 CYP2R1Q6VVX0 501 aa5.89□□□□□ -1.47
CLCN3-203ENST00000502998 HEPN1Q6WQI6 88 aa5.89□□□□□ -1.47
CLCN3-203ENST00000502998 ZNF705AQ6ZN79 300 aaPredicted RBP5.89□□□□□ -1.47
CLCN3-203ENST00000502998 HFE2Q6ZVN8 426 aa5.89□□□□□ -1.47
CLCN3-203ENST00000502998 TTLL10Q6ZVT0 673 aa5.89□□□□□ -1.47
CLCN3-203ENST00000502998 H1FNTQ75WM6 255 aaPredicted RBP5.89□□□□□ -1.47
CLCN3-203ENST00000502998 TRMT1LQ7Z2T5 733 aaKnown RBP5.89□□□□□ -1.47
CLCN3-203ENST00000502998 C6orf120Q7Z4R8 191 aa5.89□□□□□ -1.47
CLCN3-203ENST00000502998 WDR53Q7Z5U6 358 aaPredicted RBP5.89□□□□□ -1.47
CLCN3-203ENST00000502998 PROSER1Q86XN7 944 aa5.89□□□□□ -1.47
CLCN3-203ENST00000502998 TMEM192Q8IY95 271 aa5.89□□□□□ -1.47
CLCN3-203ENST00000502998 CMTM8Q8IZV2 173 aa5.89□□□□□ -1.47
CLCN3-203ENST00000502998 GJD3Q8N144 294 aa5.89□□□□□ -1.47
CLCN3-203ENST00000502998 SLC35G3Q8N808 338 aa5.89□□□□□ -1.47
CLCN3-203ENST00000502998 ZSCAN4Q8NAM6 433 aaPredicted RBP5.89□□□□□ -1.47
CLCN3-203ENST00000502998 GPR26Q8NDV2 337 aa5.89□□□□□ -1.47
CLCN3-203ENST00000502998 OR2Z1Q8NG97 314 aa5.89□□□□□ -1.47
CLCN3-203ENST00000502998 OR4K5Q8NGD3 323 aa5.89□□□□□ -1.47
CLCN3-203ENST00000502998 OR1J2Q8NGS2 313 aa5.89□□□□□ -1.47
CLCN3-203ENST00000502998 SKA2Q8WVK7 121 aaPredicted RBP5.89□□□□□ -1.47
CLCN3-203ENST00000502998 KISS1RQ969F8 398 aaPredicted RBP5.89□□□□□ -1.47
CLCN3-203ENST00000502998 C16orf58Q96GQ5 468 aa5.89□□□□□ -1.47
CLCN3-203ENST00000502998 DDOQ99489 341 aa5.89□□□□□ -1.47
CLCN3-203ENST00000502998 COPS8Q99627 209 aa5.89□□□□□ -1.47
CLCN3-203ENST00000502998 CGRRF1Q99675 332 aa5.89□□□□□ -1.47
CLCN3-203ENST00000502998 TIMM29Q9BSF4 260 aa5.89□□□□□ -1.47
CLCN3-203ENST00000502998 RSG1Q9BU20 258 aa5.89□□□□□ -1.47
CLCN3-203ENST00000502998 ADAT1Q9BUB4 502 aaKnown RBP5.89□□□□□ -1.47
CLCN3-203ENST00000502998 SPRTNQ9H040 489 aaPredicted RBP5.89□□□□□ -1.47
CLCN3-203ENST00000502998 SLC25A31Q9H0C2 315 aa5.89□□□□□ -1.47
CLCN3-203ENST00000502998 ARL6Q9H0F7 186 aa5.89□□□□□ -1.47
CLCN3-203ENST00000502998 ZBP1Q9H171 429 aa5.89□□□□□ -1.47
CLCN3-203ENST00000502998 G6PC2Q9NQR9 355 aa5.89□□□□□ -1.47
CLCN3-203ENST00000502998 C1GALT1Q9NS00 363 aa5.89□□□□□ -1.47
CLCN3-203ENST00000502998 TMEM38BQ9NVV0 291 aa5.89□□□□□ -1.47
CLCN3-203ENST00000502998 MARCH5Q9NX47 278 aa5.89□□□□□ -1.47
CLCN3-203ENST00000502998 IKZF2Q9UKS7 526 aa5.89□□□□□ -1.47
CLCN3-203ENST00000502998 CHST2Q9Y4C5 530 aa5.89□□□□□ -1.47
CLCN3-203ENST00000502998 TIMM10BQ9Y5J6 103 aa5.89□□□□□ -1.47
CLCN3-203ENST00000502998 PTPRJQ12913 1337 aa5.89□□□□□ -1.47
CLCN3-203ENST00000502998 MAP1BP46821 2468 aaKnown RBP5.89□□□□□ -1.47
CLCN3-203ENST00000502998 DMXL1Q9Y485 3027 aa5.89□□□□□ -1.47
CLCN3-203ENST00000502998 CFAP47Q6ZTR5 3102 aa5.88□□□□□ -1.47
CLCN3-203ENST00000502998 ATRXP46100 2492 aa5.88□□□□□ -1.47
CLCN3-203ENST00000502998 RALGAPA2Q2PPJ7 1873 aa5.88□□□□□ -1.47
CLCN3-203ENST00000502998 NLRC5Q86WI3 1866 aa5.88□□□□□ -1.47
CLCN3-203ENST00000502998 IGHV2OR16-5A0A0B4J2B6 119 aa5.88□□□□□ -1.47
CLCN3-203ENST00000502998 LOC102723532A0A0G2JNH3 316 aa5.88□□□□□ -1.47
CLCN3-203ENST00000502998 CCDC195A0A1B0GUA6 201 aa5.88□□□□□ -1.47
CLCN3-203ENST00000502998 IGSF23A1L1A6 192 aa5.88□□□□□ -1.47
CLCN3-203ENST00000502998 ANKUB1A6NFN9 424 aa5.88□□□□□ -1.47
CLCN3-203ENST00000502998 ARL5CA6NH57 179 aa5.88□□□□□ -1.47
CLCN3-203ENST00000502998 G3V3Y1 287 aa5.88□□□□□ -1.47
CLCN3-203ENST00000502998 RBFOX2O43251 390 aaKnown RBP eCLIP5.88□□□□□ -1.47
CLCN3-203ENST00000502998 B4GALT5O43286 388 aa5.88□□□□□ -1.47
CLCN3-203ENST00000502998 EIF4E2O60573 245 aaKnown RBP5.88□□□□□ -1.47
CLCN3-203ENST00000502998 LRP3O75074 770 aa5.88□□□□□ -1.47
CLCN3-203ENST00000502998 OR2A4O95047 310 aa5.88□□□□□ -1.47
CLCN3-203ENST00000502998 SCELO95171 688 aa5.88□□□□□ -1.47
CLCN3-203ENST00000502998 SIX3O95343 332 aaPredicted RBP5.88□□□□□ -1.47
CLCN3-203ENST00000502998 JCHAINP01591 159 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms