RNA–Protein interactions for RNA: ENST00000502313.1

HMGB1P21-201, Transcript of high mobility group box 1 pseudogene 21, humanhuman

BASIC

Gene HMGB1P21, Length 581 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P21-201ENST00000502313 HAUS1Q96CS2 278 aa3.63□□□□□ -1.83
HMGB1P21-201ENST00000502313 ZFP3Q96NJ6 502 aa3.63□□□□□ -1.83
HMGB1P21-201ENST00000502313 OXGR1Q96P68 337 aa3.63□□□□□ -1.83
HMGB1P21-201ENST00000502313 SORCS2Q96PQ0 1159 aa3.63□□□□□ -1.83
HMGB1P21-201ENST00000502313 OR5B2Q96R09 309 aa3.63□□□□□ -1.83
HMGB1P21-201ENST00000502313 RHNO1Q9BSD3 238 aa3.63□□□□□ -1.83
HMGB1P21-201ENST00000502313 UBXN6Q9BZV1 441 aa3.63□□□□□ -1.83
HMGB1P21-201ENST00000502313 ZYG11BQ9C0D3 744 aa3.63□□□□□ -1.83
HMGB1P21-201ENST00000502313 DERL2Q9GZP9 239 aa3.63□□□□□ -1.83
HMGB1P21-201ENST00000502313 NXF3Q9H4D5 531 aaKnown RBP3.63□□□□□ -1.83
HMGB1P21-201ENST00000502313 CWH43Q9H720 699 aa3.63□□□□□ -1.83
HMGB1P21-201ENST00000502313 ASB8Q9H765 288 aa3.63□□□□□ -1.83
HMGB1P21-201ENST00000502313 PLEKHA1Q9HB21 404 aa3.63□□□□□ -1.83
HMGB1P21-201ENST00000502313 ZNF334Q9HCZ1 680 aaPredicted RBP3.63□□□□□ -1.83
HMGB1P21-201ENST00000502313 VCX3AQ9NNX9 186 aa3.63□□□□□ -1.83
HMGB1P21-201ENST00000502313 ZNF224Q9NZL3 707 aa3.63□□□□□ -1.83
HMGB1P21-201ENST00000502313 C3orf18Q9UK00 162 aa3.63□□□□□ -1.83
HMGB1P21-201ENST00000502313 UBQLN1Q9UMX0 589 aaKnown RBP3.63□□□□□ -1.83
HMGB1P21-201ENST00000502313 SNX12Q9UMY4 172 aa3.63□□□□□ -1.83
HMGB1P21-201ENST00000502313 RCL1Q9Y2P8 373 aaKnown RBP3.63□□□□□ -1.83
HMGB1P21-201ENST00000502313 MRPS28Q9Y2Q9 187 aaKnown RBP3.63□□□□□ -1.83
HMGB1P21-201ENST00000502313 ATG2AQ2TAZ0 1938 aa3.63□□□□□ -1.83
HMGB1P21-201ENST00000502313 ZDBF2Q9HCK1 2354 aa3.62□□□□□ -1.83
HMGB1P21-201ENST00000502313 DCHS1Q96JQ0 3298 aa3.62□□□□□ -1.83
HMGB1P21-201ENST00000502313 A0A1W2PRF3 423 aa3.62□□□□□ -1.83
HMGB1P21-201ENST00000502313 A0A1W2PRM7 423 aa3.62□□□□□ -1.83
HMGB1P21-201ENST00000502313 FAM231BA6NCW3 169 aa3.62□□□□□ -1.83
HMGB1P21-201ENST00000502313 SIGLEC16A6NMB1 481 aa3.62□□□□□ -1.83
HMGB1P21-201ENST00000502313 H0YHG0 523 aa3.62□□□□□ -1.83
HMGB1P21-201ENST00000502313 PGRMC1O00264 195 aaKnown RBP3.62□□□□□ -1.83
HMGB1P21-201ENST00000502313 SLC1A7O00341 560 aa3.62□□□□□ -1.83
HMGB1P21-201ENST00000502313 PLPP1O14494 284 aa3.62□□□□□ -1.83
HMGB1P21-201ENST00000502313 SLC9A3R1O14745 358 aaPredicted RBP3.62□□□□□ -1.83
HMGB1P21-201ENST00000502313 SYNGR3O43761 229 aa3.62□□□□□ -1.83
HMGB1P21-201ENST00000502313 CXCL13O43927 109 aa3.62□□□□□ -1.83
HMGB1P21-201ENST00000502313 FAM189A1O60320 539 aa3.62□□□□□ -1.83
HMGB1P21-201ENST00000502313 PMS2P2O95744 297 aa3.62□□□□□ -1.83
HMGB1P21-201ENST00000502313 ASS1P00966 412 aaKnown RBP3.62□□□□□ -1.83
HMGB1P21-201ENST00000502313 SERPINA6P08185 405 aa3.62□□□□□ -1.83
HMGB1P21-201ENST00000502313 HOXD4P09016 255 aaPredicted RBP3.62□□□□□ -1.83
HMGB1P21-201ENST00000502313 PRSS56P0CW18 603 aa3.62□□□□□ -1.83
HMGB1P21-201ENST00000502313 BCKDHAP12694 445 aa3.62□□□□□ -1.83
HMGB1P21-201ENST00000502313 KCNE1P15382 129 aa3.62□□□□□ -1.83
HMGB1P21-201ENST00000502313 RPL35AP18077 110 aaKnown RBP3.62□□□□□ -1.83
HMGB1P21-201ENST00000502313 C4BPBP20851 252 aa3.62□□□□□ -1.83
HMGB1P21-201ENST00000502313 EDNRAP25101 427 aa3.62□□□□□ -1.83
HMGB1P21-201ENST00000502313 PSMB5P28074 263 aa3.62□□□□□ -1.83
HMGB1P21-201ENST00000502313 CALCRP30988 508 aa3.62□□□□□ -1.83
HMGB1P21-201ENST00000502313 ACTR1BP42025 376 aa3.62□□□□□ -1.83
HMGB1P21-201ENST00000502313 CSNK1DP48730 415 aa3.62□□□□□ -1.83
HMGB1P21-201ENST00000502313 RPL8P62917 257 aaKnown RBP3.62□□□□□ -1.83
HMGB1P21-201ENST00000502313 RPS27AP62979 156 aaKnown RBP3.62□□□□□ -1.83
HMGB1P21-201ENST00000502313 ZNF85Q03923 595 aa3.62□□□□□ -1.83
HMGB1P21-201ENST00000502313 C2orf80Q0P641 193 aa3.62□□□□□ -1.83
HMGB1P21-201ENST00000502313 BNIP2Q12982 314 aa3.62□□□□□ -1.83
HMGB1P21-201ENST00000502313 MAD2L1BPQ15013 274 aaPredicted RBP3.62□□□□□ -1.83
HMGB1P21-201ENST00000502313 ZBTB6Q15916 424 aa3.62□□□□□ -1.83
HMGB1P21-201ENST00000502313 GOLGA7BQ2TAP0 167 aa3.62□□□□□ -1.83
HMGB1P21-201ENST00000502313 TRMT5Q32P41 509 aaKnown RBP3.62□□□□□ -1.83
HMGB1P21-201ENST00000502313 CLLU1OSQ5K130 101 aa3.62□□□□□ -1.83
HMGB1P21-201ENST00000502313 FFAR4Q5NUL3 377 aa3.62□□□□□ -1.83
HMGB1P21-201ENST00000502313 FAM120AOSQ5T036 256 aa3.62□□□□□ -1.83
HMGB1P21-201ENST00000502313 SEL1L2Q5TEA6 688 aa3.62□□□□□ -1.83
HMGB1P21-201ENST00000502313 TTC33Q6PID6 262 aaPredicted RBP3.62□□□□□ -1.83
HMGB1P21-201ENST00000502313 SPESP1Q6UW49 350 aa3.62□□□□□ -1.83
HMGB1P21-201ENST00000502313 ABHD13Q7L211 337 aa3.62□□□□□ -1.83
HMGB1P21-201ENST00000502313 TMEM86AQ8N2M4 240 aa3.62□□□□□ -1.83
HMGB1P21-201ENST00000502313 BPIFB2Q8N4F0 458 aa3.62□□□□□ -1.83
HMGB1P21-201ENST00000502313 MMGT1Q8N4V1 131 aa3.62□□□□□ -1.83
HMGB1P21-201ENST00000502313 C15orf54Q8N8G6 183 aa3.62□□□□□ -1.83
HMGB1P21-201ENST00000502313 ZNF114Q8NC26 417 aa3.62□□□□□ -1.83
HMGB1P21-201ENST00000502313 OR4C3Q8NH37 302 aa3.62□□□□□ -1.83
HMGB1P21-201ENST00000502313 LMO3Q8TAP4 145 aa3.62□□□□□ -1.83
HMGB1P21-201ENST00000502313 SMARCD2Q92925 531 aa3.62□□□□□ -1.83
HMGB1P21-201ENST00000502313 CENPNQ96H22 339 aaPredicted RBP3.62□□□□□ -1.83
HMGB1P21-201ENST00000502313 ZNF670Q9BS34 389 aa3.62□□□□□ -1.83
HMGB1P21-201ENST00000502313 TIMM29Q9BSF4 260 aa3.62□□□□□ -1.83
HMGB1P21-201ENST00000502313 PATZ1Q9HBE1 687 aaKnown RBP3.62□□□□□ -1.83
HMGB1P21-201ENST00000502313 ESM1Q9NQ30 184 aa3.62□□□□□ -1.83
HMGB1P21-201ENST00000502313 FKBP14Q9NWM8 211 aa3.62□□□□□ -1.83
HMGB1P21-201ENST00000502313 ELOVL5Q9NYP7 299 aa3.62□□□□□ -1.83
HMGB1P21-201ENST00000502313 ERVW-1Q9UQF0 538 aa3.62□□□□□ -1.83
HMGB1P21-201ENST00000502313 GINS2Q9Y248 185 aa3.62□□□□□ -1.83
HMGB1P21-201ENST00000502313 VDAC3Q9Y277 283 aa3.62□□□□□ -1.83
HMGB1P21-201ENST00000502313 FADS3Q9Y5Q0 445 aa3.62□□□□□ -1.83
HMGB1P21-201ENST00000502313 CDH10Q9Y6N8 788 aa3.62□□□□□ -1.83
HMGB1P21-201ENST00000502313 COL4A4P53420 1690 aaPredicted RBP3.62□□□□□ -1.83
HMGB1P21-201ENST00000502313 GVINP1Q7Z2Y8 2422 aa3.61□□□□□ -1.83
HMGB1P21-201ENST00000502313 TMEM213A2RRL7 107 aa3.61□□□□□ -1.83
HMGB1P21-201ENST00000502313 TVP23AA6NH52 213 aa3.61□□□□□ -1.83
HMGB1P21-201ENST00000502313 ZNF724A8MTY0 619 aa3.61□□□□□ -1.83
HMGB1P21-201ENST00000502313 SGCEO43556 437 aa3.61□□□□□ -1.83
HMGB1P21-201ENST00000502313 VAMP5O95183 116 aa3.61□□□□□ -1.83
HMGB1P21-201ENST00000502313 CLIC3O95833 236 aa3.61□□□□□ -1.83
HMGB1P21-201ENST00000502313 OXTP01178 125 aa3.61□□□□□ -1.83
HMGB1P21-201ENST00000502313 CRYABP02511 175 aaKnown RBP3.61□□□□□ -1.83
HMGB1P21-201ENST00000502313 CD3GP09693 182 aa3.61□□□□□ -1.83
HMGB1P21-201ENST00000502313 SMIM10L1P0DMW3 83 aa3.61□□□□□ -1.83
HMGB1P21-201ENST00000502313 ZNF7P17097 686 aaPredicted RBP3.61□□□□□ -1.83
HMGB1P21-201ENST00000502313 HLA-GP17693 338 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms