RNA–Protein interactions for RNA: ENST00000498540.2

TRAF4-212, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 748 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-212ENST00000498540 TIMM10BQ9Y5J6 103 aa12.31□□□□□ -0.44
TRAF4-212ENST00000498540 IGHV2-70DA0A0C4DH43 119 aa12.3□□□□□ -0.44
TRAF4-212ENST00000498540 NPIPB13A6NJU9 1138 aa12.3□□□□□ -0.44
TRAF4-212ENST00000498540 NPIPB4C9JG80 1138 aa12.3□□□□□ -0.44
TRAF4-212ENST00000498540 ZNF205O95201 554 aa12.3□□□□□ -0.44
TRAF4-212ENST00000498540 THRBP10828 461 aa12.3□□□□□ -0.44
TRAF4-212ENST00000498540 TNFRSF1BP20333 461 aa12.3□□□□□ -0.44
TRAF4-212ENST00000498540 GSTM3P21266 225 aa12.3□□□□□ -0.44
TRAF4-212ENST00000498540 KITLGP21583 273 aa12.3□□□□□ -0.44
TRAF4-212ENST00000498540 SLC18A1P54219 525 aa12.3□□□□□ -0.44
TRAF4-212ENST00000498540 RAG2P55895 527 aa12.3□□□□□ -0.44
TRAF4-212ENST00000498540 RELBQ01201 579 aa12.3□□□□□ -0.44
TRAF4-212ENST00000498540 DEFB112Q30KQ8 113 aa12.3□□□□□ -0.44
TRAF4-212ENST00000498540 BTNL3Q6UXE8 466 aa12.3□□□□□ -0.44
TRAF4-212ENST00000498540 LRRN1Q6UXK5 716 aa12.3□□□□□ -0.44
TRAF4-212ENST00000498540 C17orf107Q6ZR85 190 aa12.3□□□□□ -0.44
TRAF4-212ENST00000498540 FOXL2NBQ6ZUU3 175 aa12.3□□□□□ -0.44
TRAF4-212ENST00000498540 DHDDSQ86SQ9 333 aa12.3□□□□□ -0.44
TRAF4-212ENST00000498540 PATL1Q86TB9 770 aaKnown RBP12.3□□□□□ -0.44
TRAF4-212ENST00000498540 MUC20Q8N307 709 aaPredicted RBP12.3□□□□□ -0.44
TRAF4-212ENST00000498540 POU5F2Q8N7G0 328 aa12.3□□□□□ -0.44
TRAF4-212ENST00000498540 NPEPL1Q8NDH3 523 aa12.3□□□□□ -0.44
TRAF4-212ENST00000498540 LIPHQ8WWY8 451 aa12.3□□□□□ -0.44
TRAF4-212ENST00000498540 CCT8L2Q96SF2 557 aa12.3□□□□□ -0.44
TRAF4-212ENST00000498540 CITED1Q99966 193 aa12.3□□□□□ -0.44
TRAF4-212ENST00000498540 ALG12Q9BV10 488 aa12.3□□□□□ -0.44
TRAF4-212ENST00000498540 GCM1Q9NP62 436 aa12.3□□□□□ -0.44
TRAF4-212ENST00000498540 MAN2C1Q9NTJ4 1040 aa12.3□□□□□ -0.44
TRAF4-212ENST00000498540 ARMCX1Q9P291 453 aa12.3□□□□□ -0.44
TRAF4-212ENST00000498540 A0A1B0GUS0 222 aa12.29□□□□□ -0.44
TRAF4-212ENST00000498540 A0A1W2PPL8 197 aa12.29□□□□□ -0.44
TRAF4-212ENST00000498540 GMNCA6NCL1 334 aa12.29□□□□□ -0.44
TRAF4-212ENST00000498540 SRRM5B3KS81 715 aa12.29□□□□□ -0.44
TRAF4-212ENST00000498540 PIP5K1CO60331 668 aa12.29□□□□□ -0.44
TRAF4-212ENST00000498540 SHOX2O60902 331 aaPredicted RBP12.29□□□□□ -0.44
TRAF4-212ENST00000498540 SCG5P05408 212 aa12.29□□□□□ -0.44
TRAF4-212ENST00000498540 NR2C1P13056 603 aa12.29□□□□□ -0.44
TRAF4-212ENST00000498540 RPS2P15880 293 aaKnown RBP12.29□□□□□ -0.44
TRAF4-212ENST00000498540 RBM34P42696 430 aaKnown RBP12.29□□□□□ -0.44
TRAF4-212ENST00000498540 MAGOHP61326 146 aaKnown RBP12.29□□□□□ -0.44
TRAF4-212ENST00000498540 PCBD1P61457 104 aa12.29□□□□□ -0.44
TRAF4-212ENST00000498540 BRICD5Q6PL45 260 aa12.29□□□□□ -0.44
TRAF4-212ENST00000498540 ARL9Q6T311 187 aa12.29□□□□□ -0.44
TRAF4-212ENST00000498540 RHOUQ7L0Q8 258 aa12.29□□□□□ -0.44
TRAF4-212ENST00000498540 CROCCP2Q86T23 111 aa12.29□□□□□ -0.44
TRAF4-212ENST00000498540 KLBQ86Z14 1044 aa12.29□□□□□ -0.44
TRAF4-212ENST00000498540 OR10S1Q8NGN2 331 aa12.29□□□□□ -0.44
TRAF4-212ENST00000498540 OR4F5Q8NH21 305 aa12.29□□□□□ -0.44
TRAF4-212ENST00000498540 ZNF420Q8TAQ5 688 aaPredicted RBP12.29□□□□□ -0.44
TRAF4-212ENST00000498540 SLC26A7Q8TE54 656 aa12.29□□□□□ -0.44
TRAF4-212ENST00000498540 TMEM239Q8WW34 195 aa12.29□□□□□ -0.44
TRAF4-212ENST00000498540 CMBLQ96DG6 245 aa12.29□□□□□ -0.44
TRAF4-212ENST00000498540 CGREF1Q99674 301 aa12.29□□□□□ -0.44
TRAF4-212ENST00000498540 PKP2Q99959 881 aa12.29□□□□□ -0.44
TRAF4-212ENST00000498540 CCDC28BQ9BUN5 200 aa12.29□□□□□ -0.44
TRAF4-212ENST00000498540 MMP27Q9H306 513 aa12.29□□□□□ -0.44
TRAF4-212ENST00000498540 MARCH7Q9H992 704 aa12.29□□□□□ -0.44
TRAF4-212ENST00000498540 BEX1Q9HBH7 125 aa12.29□□□□□ -0.44
TRAF4-212ENST00000498540 TBCCD1Q9NVR7 557 aa12.29□□□□□ -0.44
TRAF4-212ENST00000498540 C1RLQ9NZP8 487 aa12.29□□□□□ -0.44
TRAF4-212ENST00000498540 NDRG4Q9ULP0 352 aaKnown RBP12.29□□□□□ -0.44
TRAF4-212ENST00000498540 CYB5R3P00387 301 aaPredicted RBP12.28□□□□□ -0.44
TRAF4-212ENST00000498540 IGF2P01344 180 aa12.28□□□□□ -0.44
TRAF4-212ENST00000498540 MSR1P21757 451 aa12.28□□□□□ -0.44
TRAF4-212ENST00000498540 TAS2R41P59536 307 aa12.28□□□□□ -0.44
TRAF4-212ENST00000498540 KRTAP10-3P60369 221 aa12.28□□□□□ -0.44
TRAF4-212ENST00000498540 RPL27P61353 136 aaKnown RBP12.28□□□□□ -0.44
TRAF4-212ENST00000498540 GNB2P62879 340 aa12.28□□□□□ -0.44
TRAF4-212ENST00000498540 ALG10Q5BKT4 473 aa12.28□□□□□ -0.44
TRAF4-212ENST00000498540 ZNF362Q5T0B9 420 aaPredicted RBP12.28□□□□□ -0.44
TRAF4-212ENST00000498540 OLFML2AQ68BL7 652 aa12.28□□□□□ -0.44
TRAF4-212ENST00000498540 FIP1L1Q6UN15 594 aaKnown RBP12.28□□□□□ -0.44
TRAF4-212ENST00000498540 IGFN1Q86VF2 1251 aa12.28□□□□□ -0.44
TRAF4-212ENST00000498540 SLC30A8Q8IWU4 369 aa12.28□□□□□ -0.44
TRAF4-212ENST00000498540 OR10AD1Q8NGE0 317 aa12.28□□□□□ -0.44
TRAF4-212ENST00000498540 RAB40AQ8WXH6 277 aa12.28□□□□□ -0.44
TRAF4-212ENST00000498540 ZDHHC16Q969W1 377 aa12.28□□□□□ -0.44
TRAF4-212ENST00000498540 THOC1Q96FV9 657 aaKnown RBP12.28□□□□□ -0.44
TRAF4-212ENST00000498540 C7orf26Q96N11 449 aa12.28□□□□□ -0.44
TRAF4-212ENST00000498540 RBP7Q96R05 134 aa12.28□□□□□ -0.44
TRAF4-212ENST00000498540 PRDM13Q9H4Q3 707 aa12.28□□□□□ -0.44
TRAF4-212ENST00000498540 KAT8Q9H7Z6 458 aaKnown RBP12.28□□□□□ -0.44
TRAF4-212ENST00000498540 TMEM165Q9HC07 324 aa12.28□□□□□ -0.44
TRAF4-212ENST00000498540 EMC7Q9NPA0 242 aa12.28□□□□□ -0.44
TRAF4-212ENST00000498540 HIF3AQ9Y2N7 669 aa12.28□□□□□ -0.44
TRAF4-212ENST00000498540 STARD10Q9Y365 291 aa12.28□□□□□ -0.44
TRAF4-212ENST00000498540 SH3GLB1Q9Y371 365 aa12.28□□□□□ -0.44
TRAF4-212ENST00000498540 C12orf71A8MTZ7 269 aa12.27□□□□□ -0.45
TRAF4-212ENST00000498540 SURF4O15260 269 aa12.27□□□□□ -0.45
TRAF4-212ENST00000498540 DOK2O60496 412 aa12.27□□□□□ -0.45
TRAF4-212ENST00000498540 OR5F1O95221 314 aa12.27□□□□□ -0.45
TRAF4-212ENST00000498540 VIMP08670 466 aaKnown RBP12.27□□□□□ -0.45
TRAF4-212ENST00000498540 HTR5AP47898 357 aa12.27□□□□□ -0.45
TRAF4-212ENST00000498540 PIN1Q13526 163 aaPredicted RBP12.27□□□□□ -0.45
TRAF4-212ENST00000498540 SLC27A4Q6P1M0 643 aa12.27□□□□□ -0.45
TRAF4-212ENST00000498540 SYT9Q86SS6 491 aa12.27□□□□□ -0.45
TRAF4-212ENST00000498540 OR5AS1Q8N127 324 aa12.27□□□□□ -0.45
TRAF4-212ENST00000498540 DPP10Q8N608 796 aa12.27□□□□□ -0.45
TRAF4-212ENST00000498540 OR10A6Q8NH74 314 aa12.27□□□□□ -0.45
TRAF4-212ENST00000498540 SLC7A6Q92536 515 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms