RNA–Protein interactions for RNA: ENST00000498325.5

HMGXB4-208, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-208ENST00000498325 HSF2Q03933 536 aa4.71□□□□□ -1.66
HMGXB4-208ENST00000498325 PUDPQ08623 228 aa4.71□□□□□ -1.66
HMGXB4-208ENST00000498325 ACSM1Q08AH1 577 aa4.71□□□□□ -1.66
HMGXB4-208ENST00000498325 MYBPHQ13203 477 aa4.71□□□□□ -1.66
HMGXB4-208ENST00000498325 GPR50Q13585 617 aa4.71□□□□□ -1.66
HMGXB4-208ENST00000498325 GGTLC2Q14390 218 aa4.71□□□□□ -1.66
HMGXB4-208ENST00000498325 OR1C1Q15619 314 aa4.71□□□□□ -1.66
HMGXB4-208ENST00000498325 ACKR1Q16570 336 aa4.71□□□□□ -1.66
HMGXB4-208ENST00000498325 ZNF239Q16600 458 aaKnown RBP4.71□□□□□ -1.66
HMGXB4-208ENST00000498325 TSTQ16762 297 aaKnown RBP4.71□□□□□ -1.66
HMGXB4-208ENST00000498325 RGS21Q2M5E4 152 aa4.71□□□□□ -1.66
HMGXB4-208ENST00000498325 MS4A18Q3C1V0 323 aa4.71□□□□□ -1.66
HMGXB4-208ENST00000498325 TMEM176BQ3YBM2 270 aaPredicted RBP4.71□□□□□ -1.66
HMGXB4-208ENST00000498325 GXYLT1Q4G148 440 aa4.71□□□□□ -1.66
HMGXB4-208ENST00000498325 TM4SF20Q53R12 229 aa4.71□□□□□ -1.66
HMGXB4-208ENST00000498325 RAET1LQ5VY80 246 aa4.71□□□□□ -1.66
HMGXB4-208ENST00000498325 TMEM225Q6GV28 225 aa4.71□□□□□ -1.66
HMGXB4-208ENST00000498325 SLC25A25Q6KCM7 469 aa4.71□□□□□ -1.66
HMGXB4-208ENST00000498325 C16orf87Q6PH81 154 aa4.71□□□□□ -1.66
HMGXB4-208ENST00000498325 DNM1P34Q6PK57 102 aa4.71□□□□□ -1.66
HMGXB4-208ENST00000498325 GDPGP1Q6ZNW5 385 aa4.71□□□□□ -1.66
HMGXB4-208ENST00000498325 DCDC5Q6ZRR9 648 aa4.71□□□□□ -1.66
HMGXB4-208ENST00000498325 LINC00696Q6ZRV3 163 aa4.71□□□□□ -1.66
HMGXB4-208ENST00000498325 TMPPEQ6ZT21 453 aa4.71□□□□□ -1.66
HMGXB4-208ENST00000498325 TUBA1AQ71U36 451 aa4.71□□□□□ -1.66
HMGXB4-208ENST00000498325 SLC35D2Q76EJ3 337 aa4.71□□□□□ -1.66
HMGXB4-208ENST00000498325 PXKQ7Z7A4 578 aa4.71□□□□□ -1.66
HMGXB4-208ENST00000498325 LHFPL3Q86UP9 236 aa4.71□□□□□ -1.66
HMGXB4-208ENST00000498325 UEVLDQ8IX04 471 aa4.71□□□□□ -1.66
HMGXB4-208ENST00000498325 TEX19Q8NA77 164 aa4.71□□□□□ -1.66
HMGXB4-208ENST00000498325 CYB561A3Q8NBI2 242 aa4.71□□□□□ -1.66
HMGXB4-208ENST00000498325 BBS1Q8NFJ9 593 aa4.71□□□□□ -1.66
HMGXB4-208ENST00000498325 OR10H4Q8NGA5 316 aa4.71□□□□□ -1.66
HMGXB4-208ENST00000498325 OR4F15Q8NGB8 312 aa4.71□□□□□ -1.66
HMGXB4-208ENST00000498325 OR2T27Q8NH04 317 aa4.71□□□□□ -1.66
HMGXB4-208ENST00000498325 OR14L1PQ8NHC6 308 aa4.71□□□□□ -1.66
HMGXB4-208ENST00000498325 SPATA3Q8NHX4 192 aa4.71□□□□□ -1.66
HMGXB4-208ENST00000498325 SMPDL3BQ92485 455 aa4.71□□□□□ -1.66
HMGXB4-208ENST00000498325 HAS2Q92819 552 aa4.71□□□□□ -1.66
HMGXB4-208ENST00000498325 RASD2Q96D21 266 aa4.71□□□□□ -1.66
HMGXB4-208ENST00000498325 ZHX1-C8orf76Q96EF9 292 aa4.71□□□□□ -1.66
HMGXB4-208ENST00000498325 ARL5BQ96KC2 179 aa4.71□□□□□ -1.66
HMGXB4-208ENST00000498325 ADAD1Q96M93 576 aaKnown RBP4.71□□□□□ -1.66
HMGXB4-208ENST00000498325 OXGR1Q96P68 337 aa4.71□□□□□ -1.66
HMGXB4-208ENST00000498325 TSPAN32Q96QS1 320 aa4.71□□□□□ -1.66
HMGXB4-208ENST00000498325 RBP7Q96R05 134 aa4.71□□□□□ -1.66
HMGXB4-208ENST00000498325 OR5B2Q96R09 309 aa4.71□□□□□ -1.66
HMGXB4-208ENST00000498325 OR5M11Q96RB7 305 aa4.71□□□□□ -1.66
HMGXB4-208ENST00000498325 CNN2Q99439 309 aaKnown RBP4.71□□□□□ -1.66
HMGXB4-208ENST00000498325 DDOQ99489 341 aa4.71□□□□□ -1.66
HMGXB4-208ENST00000498325 MNTQ99583 582 aa4.71□□□□□ -1.66
HMGXB4-208ENST00000498325 NMNAT2Q9BZQ4 307 aa4.71□□□□□ -1.66
HMGXB4-208ENST00000498325 FANCFQ9NPI8 374 aa4.71□□□□□ -1.66
HMGXB4-208ENST00000498325 RPRD1BQ9NQG5 326 aaKnown RBP4.71□□□□□ -1.66
HMGXB4-208ENST00000498325 ASB6Q9NWX5 421 aa4.71□□□□□ -1.66
HMGXB4-208ENST00000498325 ANKRD10Q9NXR5 420 aa4.71□□□□□ -1.66
HMGXB4-208ENST00000498325 SEC14L4Q9UDX3 406 aa4.71□□□□□ -1.66
HMGXB4-208ENST00000498325 CLEC2DQ9UHP7 191 aa4.71□□□□□ -1.66
HMGXB4-208ENST00000498325 NPIPA1Q9UND3 350 aa4.71□□□□□ -1.66
HMGXB4-208ENST00000498325 POLHQ9Y253 713 aa4.71□□□□□ -1.66
HMGXB4-208ENST00000498325 RASD1Q9Y272 281 aa4.71□□□□□ -1.66
HMGXB4-208ENST00000498325 KLF13Q9Y2Y9 288 aaPredicted RBP4.71□□□□□ -1.66
HMGXB4-208ENST00000498325 LSM2Q9Y333 95 aaKnown RBP4.71□□□□□ -1.66
HMGXB4-208ENST00000498325 FKBP7Q9Y680 259 aa4.71□□□□□ -1.66
HMGXB4-208ENST00000498325 TMEM14AQ9Y6G1 99 aa4.71□□□□□ -1.66
HMGXB4-208ENST00000498325 COX11Q9Y6N1 276 aa4.71□□□□□ -1.66
HMGXB4-208ENST00000498325 SVILO95425 2214 aa4.7□□□□□ -1.66
HMGXB4-208ENST00000498325 ZNF469Q96JG9 3925 aaPredicted RBP4.7□□□□□ -1.66
HMGXB4-208ENST00000498325 LOC102725191A0A1B0GVB3 256 aa4.7□□□□□ -1.66
HMGXB4-208ENST00000498325 A0A1W2PNV4 684 aa4.7□□□□□ -1.66
HMGXB4-208ENST00000498325 FUOMA2VDF0 154 aa4.7□□□□□ -1.66
HMGXB4-208ENST00000498325 PRSS37A4D1T9 235 aa4.7□□□□□ -1.66
HMGXB4-208ENST00000498325 OR5H15A6NDH6 313 aa4.7□□□□□ -1.66
HMGXB4-208ENST00000498325 CCDC182A6NF36 153 aa4.7□□□□□ -1.66
HMGXB4-208ENST00000498325 A6NL46 340 aa4.7□□□□□ -1.66
HMGXB4-208ENST00000498325 ZNF726A6NNF4 738 aa4.7□□□□□ -1.66
HMGXB4-208ENST00000498325 B4DXG7 233 aa4.7□□□□□ -1.66
HMGXB4-208ENST00000498325 ZNF670-ZNF695F2Z2N8 137 aa4.7□□□□□ -1.66
HMGXB4-208ENST00000498325 J3QRE1 110 aa4.7□□□□□ -1.66
HMGXB4-208ENST00000498325 PHYHO14832 338 aa4.7□□□□□ -1.66
HMGXB4-208ENST00000498325 NKX2-8O15522 239 aa4.7□□□□□ -1.66
HMGXB4-208ENST00000498325 SERPINI2O75830 405 aa4.7□□□□□ -1.66
HMGXB4-208ENST00000498325 NEURL1O76050 574 aa4.7□□□□□ -1.66
HMGXB4-208ENST00000498325 AKR7A3O95154 331 aa4.7□□□□□ -1.66
HMGXB4-208ENST00000498325 APOL3O95236 402 aa4.7□□□□□ -1.66
HMGXB4-208ENST00000498325 PLGP00747 810 aaPredicted RBP4.7□□□□□ -1.66
HMGXB4-208ENST00000498325 MT-ND5P03915 603 aa4.7□□□□□ -1.66
HMGXB4-208ENST00000498325 GYPBP06028 91 aa4.7□□□□□ -1.66
HMGXB4-208ENST00000498325 SP1P08047 785 aa4.7□□□□□ -1.66
HMGXB4-208ENST00000498325 MRPL3P09001 348 aaKnown RBP4.7□□□□□ -1.66
HMGXB4-208ENST00000498325 TACSTD2P09758 323 aa4.7□□□□□ -1.66
HMGXB4-208ENST00000498325 LIMS3P0CW19 117 aa4.7□□□□□ -1.66
HMGXB4-208ENST00000498325 LIMS4P0CW20 117 aa4.7□□□□□ -1.66
HMGXB4-208ENST00000498325 CLUP10909 449 aa4.7□□□□□ -1.66
HMGXB4-208ENST00000498325 NR2C1P13056 603 aa4.7□□□□□ -1.66
HMGXB4-208ENST00000498325 CPEP16870 476 aa4.7□□□□□ -1.66
HMGXB4-208ENST00000498325 ZNF43P17038 809 aa4.7□□□□□ -1.66
HMGXB4-208ENST00000498325 NR4A1P22736 598 aa4.7□□□□□ -1.66
HMGXB4-208ENST00000498325 TCEA1P23193 301 aaKnown RBP4.7□□□□□ -1.66
HMGXB4-208ENST00000498325 S100A1P23297 94 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms