RNA–Protein interactions for RNA: ENST00000497984.5

SMC4-227, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-227ENST00000497984 GORASP2Q9H8Y8 452 aa1.48□□□□□ -2.17
SMC4-227ENST00000497984 SAMSN1Q9NSI8 373 aaKnown RBP1.48□□□□□ -2.17
SMC4-227ENST00000497984 CBY1Q9Y3M2 126 aa1.48□□□□□ -2.17
SMC4-227ENST00000497984 DOCK8Q8NF50 2099 aa1.47□□□□□ -2.17
SMC4-227ENST00000497984 ZNF816-ZNF321PA0A0X1KG74 233 aa1.47□□□□□ -2.17
SMC4-227ENST00000497984 FAM240BA0A1B0GVZ2 78 aa1.47□□□□□ -2.17
SMC4-227ENST00000497984 OR6C74A6NCV1 312 aa1.47□□□□□ -2.17
SMC4-227ENST00000497984 ZNF98A6NK75 572 aa1.47□□□□□ -2.17
SMC4-227ENST00000497984 CHST10O43529 356 aa1.47□□□□□ -2.17
SMC4-227ENST00000497984 REM1O75628 298 aa1.47□□□□□ -2.17
SMC4-227ENST00000497984 SURF6O75683 361 aaKnown RBP1.47□□□□□ -2.17
SMC4-227ENST00000497984 FGGP02679 453 aa1.47□□□□□ -2.17
SMC4-227ENST00000497984 PTMAP06454 111 aaKnown RBP1.47□□□□□ -2.17
SMC4-227ENST00000497984 CD3GP09693 182 aa1.47□□□□□ -2.17
SMC4-227ENST00000497984 OR8U9P0C7N5 309 aa1.47□□□□□ -2.17
SMC4-227ENST00000497984 GLRA2P23416 452 aa1.47□□□□□ -2.17
SMC4-227ENST00000497984 TNFSF9P41273 254 aa1.47□□□□□ -2.17
SMC4-227ENST00000497984 IFNAR2P48551 515 aa1.47□□□□□ -2.17
SMC4-227ENST00000497984 YWHAGP61981 247 aaKnown RBP eCLIP1.47□□□□□ -2.171e-117■■■■■ 400.8
SMC4-227ENST00000497984 CCNA1P78396 465 aa1.47□□□□□ -2.17
SMC4-227ENST00000497984 CRADDP78560 199 aa1.47□□□□□ -2.17
SMC4-227ENST00000497984 IL15RAQ13261 267 aa1.47□□□□□ -2.17
SMC4-227ENST00000497984 GPM6BQ13491 265 aa1.47□□□□□ -2.17
SMC4-227ENST00000497984 TAF7Q15545 349 aaPredicted RBP1.47□□□□□ -2.17
SMC4-227ENST00000497984 CTSL3PQ5NE16 218 aa1.47□□□□□ -2.17
SMC4-227ENST00000497984 PMF1Q6P1K2 205 aa1.47□□□□□ -2.17
SMC4-227ENST00000497984 METTL13Q8N6R0 699 aa1.47□□□□□ -2.17
SMC4-227ENST00000497984 TMEM105Q8N8V8 129 aa1.47□□□□□ -2.17
SMC4-227ENST00000497984 BHLHE23Q8NDY6 225 aa1.47□□□□□ -2.17
SMC4-227ENST00000497984 GPR151Q8TDV0 419 aa1.47□□□□□ -2.17
SMC4-227ENST00000497984 TVP23CQ96ET8 276 aa1.47□□□□□ -2.17
SMC4-227ENST00000497984 FBXO6Q9NRD1 293 aaPredicted RBP1.47□□□□□ -2.17
SMC4-227ENST00000497984 VANGL2Q9ULK5 521 aa1.47□□□□□ -2.17
SMC4-227ENST00000497984 ISY1Q9ULR0 285 aaKnown RBP1.47□□□□□ -2.17
SMC4-227ENST00000497984 ST3GAL6Q9Y274 331 aa1.47□□□□□ -2.17
SMC4-227ENST00000497984 GOLT1BQ9Y3E0 138 aa1.47□□□□□ -2.17
SMC4-227ENST00000497984 TSSC4Q9Y5U2 329 aaPredicted RBP1.47□□□□□ -2.17
SMC4-227ENST00000497984 SCN1AP35498 2009 aa1.47□□□□□ -2.17
SMC4-227ENST00000497984 MTX2O75431 263 aa1.46□□□□□ -2.18
SMC4-227ENST00000497984 ZNF806P0C7X5 589 aa1.46□□□□□ -2.18
SMC4-227ENST00000497984 MCF2P10911 925 aa1.46□□□□□ -2.18
SMC4-227ENST00000497984 LGALS3P17931 250 aaKnown RBP1.46□□□□□ -2.18
SMC4-227ENST00000497984 RAB3AP20336 220 aa1.46□□□□□ -2.18
SMC4-227ENST00000497984 ME2P23368 584 aa1.46□□□□□ -2.18
SMC4-227ENST00000497984 CEACAM3P40198 252 aa1.46□□□□□ -2.18
SMC4-227ENST00000497984 HCAR3P49019 387 aa1.46□□□□□ -2.18
SMC4-227ENST00000497984 VSX2P58304 361 aaPredicted RBP1.46□□□□□ -2.18
SMC4-227ENST00000497984 ACTG2P63267 376 aa1.46□□□□□ -2.18
SMC4-227ENST00000497984 TGFBIQ15582 683 aa1.46□□□□□ -2.18
SMC4-227ENST00000497984 FAM222AQ5U5X8 452 aa1.46□□□□□ -2.18
SMC4-227ENST00000497984 ANKRD26P1Q6NSI1 321 aa1.46□□□□□ -2.18
SMC4-227ENST00000497984 H3F3CQ6NXT2 135 aa1.46□□□□□ -2.18
SMC4-227ENST00000497984 CASP12Q6UXS9 341 aa1.46□□□□□ -2.18
SMC4-227ENST00000497984 MS4A15Q8N5U1 240 aa1.46□□□□□ -2.18
SMC4-227ENST00000497984 TMEM104Q8NE00 496 aa1.46□□□□□ -2.18
SMC4-227ENST00000497984 C1orf64Q8NEQ6 169 aa1.46□□□□□ -2.18
SMC4-227ENST00000497984 OR1S2Q8NGQ3 325 aa1.46□□□□□ -2.18
SMC4-227ENST00000497984 OR2A1Q8NGT9 310 aa1.46□□□□□ -2.18
SMC4-227ENST00000497984 PLPPR1Q8TBJ4 325 aa1.46□□□□□ -2.18
SMC4-227ENST00000497984 KLF14Q8TD94 323 aaPredicted RBP1.46□□□□□ -2.18
SMC4-227ENST00000497984 SHC3Q92529 594 aa1.46□□□□□ -2.18
SMC4-227ENST00000497984 DNAJC1Q96KC8 554 aaKnown RBP1.46□□□□□ -2.18
SMC4-227ENST00000497984 PKNOX2Q96KN3 472 aa1.46□□□□□ -2.18
SMC4-227ENST00000497984 HSD17B10Q99714 261 aaKnown RBP1.46□□□□□ -2.18
SMC4-227ENST00000497984 KCNJ16Q9NPI9 418 aa1.46□□□□□ -2.18
SMC4-227ENST00000497984 ZNF391Q9UJN7 358 aa1.46□□□□□ -2.18
SMC4-227ENST00000497984 CNTNAP1P78357 1384 aa1.46□□□□□ -2.18
SMC4-227ENST00000497984 SHANK1Q9Y566 2161 aa1.45□□□□□ -2.18
SMC4-227ENST00000497984 PCNX2A6NKB5 2137 aa1.45□□□□□ -2.18
SMC4-227ENST00000497984 IGHV7-4-1A0A0J9YVY3 117 aa1.45□□□□□ -2.18
SMC4-227ENST00000497984 GLYATL1P3A0A0U1RQE8 302 aa1.45□□□□□ -2.18
SMC4-227ENST00000497984 CTSLP07711 333 aa1.45□□□□□ -2.18
SMC4-227ENST00000497984 FOXN2P32314 431 aa1.45□□□□□ -2.18
SMC4-227ENST00000497984 TGFBR1P36897 503 aa1.45□□□□□ -2.18
SMC4-227ENST00000497984 GPX4P36969 197 aaPredicted RBP1.45□□□□□ -2.18
SMC4-227ENST00000497984 CCNHP51946 323 aaPredicted RBP1.45□□□□□ -2.18
SMC4-227ENST00000497984 ARFIP1P53367 373 aa1.45□□□□□ -2.18
SMC4-227ENST00000497984 AIF1P55008 147 aa1.45□□□□□ -2.18
SMC4-227ENST00000497984 SYNJ2BPP57105 145 aa1.45□□□□□ -2.18
SMC4-227ENST00000497984 RPL23AP62750 156 aaKnown RBP1.45□□□□□ -2.18
SMC4-227ENST00000497984 ADARB1P78563 741 aaKnown RBP1.45□□□□□ -2.18
SMC4-227ENST00000497984 SLC25A11Q02978 314 aaKnown RBP1.45□□□□□ -2.18
SMC4-227ENST00000497984 FUT5Q11128 374 aa1.45□□□□□ -2.18
SMC4-227ENST00000497984 IL24Q13007 206 aa1.45□□□□□ -2.18
SMC4-227ENST00000497984 MPV17L2Q567V2 206 aa1.45□□□□□ -2.18
SMC4-227ENST00000497984 RNASE13Q5GAN3 156 aaKnown RBP1.45□□□□□ -2.18
SMC4-227ENST00000497984 TCEAL5Q5H9L2 206 aa1.45□□□□□ -2.18
SMC4-227ENST00000497984 RUFY3Q7L099 469 aa1.45□□□□□ -2.18
SMC4-227ENST00000497984 TMEM256Q8N2U0 113 aa1.45□□□□□ -2.18
SMC4-227ENST00000497984 OR1P1Q8NH06 330 aa1.45□□□□□ -2.18
SMC4-227ENST00000497984 RSPH1Q8WYR4 309 aa1.45□□□□□ -2.18
SMC4-227ENST00000497984 TCEAL3Q969E4 200 aa1.45□□□□□ -2.18
SMC4-227ENST00000497984 RSG1Q9BU20 258 aa1.45□□□□□ -2.18
SMC4-227ENST00000497984 ROPN1BQ9BZX4 212 aaPredicted RBP1.45□□□□□ -2.18
SMC4-227ENST00000497984 NEK6Q9HC98 313 aa1.45□□□□□ -2.18
SMC4-227ENST00000497984 C8orf17Q9NRJ1 99 aa1.45□□□□□ -2.18
SMC4-227ENST00000497984 TRMT112Q9UI30 125 aaKnown RBP1.45□□□□□ -2.18
SMC4-227ENST00000497984 NUP50Q9UKX7 468 aa1.45□□□□□ -2.18
SMC4-227ENST00000497984 CLEC4AQ9UMR7 237 aa1.45□□□□□ -2.18
SMC4-227ENST00000497984 MYO16Q9Y6X6 1858 aa1.44□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms