RNA–Protein interactions for RNA: ENST00000497960.5

NUP50-219, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-219ENST00000497960 TBC1D28Q2M2D7 210 aa13.21□□□□□ -0.29
NUP50-219ENST00000497960 SLC25A47Q6Q0C1 308 aa13.21□□□□□ -0.29
NUP50-219ENST00000497960 ZNF584Q8IVC4 421 aa13.21□□□□□ -0.29
NUP50-219ENST00000497960 ARIH2OSQ8N7S6 290 aa13.21□□□□□ -0.29
NUP50-219ENST00000497960 OR2T33Q8NG76 320 aa13.21□□□□□ -0.29
NUP50-219ENST00000497960 EME1Q96AY2 570 aa13.21□□□□□ -0.29
NUP50-219ENST00000497960 PIMREGQ9BSJ6 248 aa13.21□□□□□ -0.29
NUP50-219ENST00000497960 REV1Q9UBZ9 1251 aa13.21□□□□□ -0.29
NUP50-219ENST00000497960 ENOPH1Q9UHY7 261 aa13.21□□□□□ -0.29
NUP50-219ENST00000497960 ORC6Q9Y5N6 252 aa13.21□□□□□ -0.29
NUP50-219ENST00000497960 CR1P17927 2039 aa13.21□□□□□ -0.29
NUP50-219ENST00000497960 ABCA2Q9BZC7 2435 aa13.21□□□□□ -0.3
NUP50-219ENST00000497960 LOC390937A0A1W2PQ73 354 aa13.2□□□□□ -0.3
NUP50-219ENST00000497960 BHLHE40O14503 412 aa13.2□□□□□ -0.3
NUP50-219ENST00000497960 SYNGR3O43761 229 aa13.2□□□□□ -0.3
NUP50-219ENST00000497960 TLX2O43763 284 aaPredicted RBP13.2□□□□□ -0.3
NUP50-219ENST00000497960 CD5LO43866 347 aa13.2□□□□□ -0.3
NUP50-219ENST00000497960 MITFO75030 526 aaPredicted RBP13.2□□□□□ -0.3
NUP50-219ENST00000497960 ADRA2AP08913 450 aa13.2□□□□□ -0.3
NUP50-219ENST00000497960 APEHP13798 732 aaKnown RBP13.2□□□□□ -0.3
NUP50-219ENST00000497960 USF1P22415 310 aaPredicted RBP13.2□□□□□ -0.3
NUP50-219ENST00000497960 APLNRP35414 380 aa13.2□□□□□ -0.3
NUP50-219ENST00000497960 SELENOVP59797 346 aa13.2□□□□□ -0.3
NUP50-219ENST00000497960 TRIP10Q15642 601 aa13.2□□□□□ -0.3
NUP50-219ENST00000497960 KDM4DQ6B0I6 523 aa13.2□□□□□ -0.3
NUP50-219ENST00000497960 ADCK1Q86TW2 530 aa13.2□□□□□ -0.3
NUP50-219ENST00000497960 PARP8Q8N3A8 854 aa13.2□□□□□ -0.3
NUP50-219ENST00000497960 IQCF1Q8N6M8 205 aa13.2□□□□□ -0.3
NUP50-219ENST00000497960 SYT3Q9BQG1 590 aa13.2□□□□□ -0.3
NUP50-219ENST00000497960 OSBPL10Q9BXB5 764 aa13.2□□□□□ -0.3
NUP50-219ENST00000497960 MRPL37Q9BZE1 423 aaKnown RBP13.2□□□□□ -0.3
NUP50-219ENST00000497960 DCLRE1BQ9H816 532 aa13.2□□□□□ -0.3
NUP50-219ENST00000497960 YAE1D1Q9NRH1 226 aa13.2□□□□□ -0.3
NUP50-219ENST00000497960 BAIAP2Q9UQB8 552 aa13.2□□□□□ -0.3
NUP50-219ENST00000497960 UGT2A1Q9Y4X1 527 aa13.2□□□□□ -0.3
NUP50-219ENST00000497960 A0A096LNT2 108 aa13.19□□□□□ -0.3
NUP50-219ENST00000497960 IGKV1D-43A0A0B4J1Z2 117 aa13.19□□□□□ -0.3
NUP50-219ENST00000497960 M0R233 179 aa13.19□□□□□ -0.3
NUP50-219ENST00000497960 IMPA2O14732 288 aa13.19□□□□□ -0.3
NUP50-219ENST00000497960 ARPC3O15145 178 aa13.19□□□□□ -0.3
NUP50-219ENST00000497960 TXNDC12O95881 172 aa13.19□□□□□ -0.3
NUP50-219ENST00000497960 MMP7P09237 267 aaPredicted RBP13.19□□□□□ -0.3
NUP50-219ENST00000497960 CCL2P13500 99 aa13.19□□□□□ -0.3
NUP50-219ENST00000497960 HIST1H1CP16403 213 aaKnown RBP13.19□□□□□ -0.3
NUP50-219ENST00000497960 RAD52P43351 418 aa13.19□□□□□ -0.3
NUP50-219ENST00000497960 TMEM249Q2WGJ8 235 aa13.19□□□□□ -0.3
NUP50-219ENST00000497960 PABPC1L2AQ5JQF8 200 aa13.19□□□□□ -0.3
NUP50-219ENST00000497960 SLC35F1Q5T1Q4 408 aa13.19□□□□□ -0.3
NUP50-219ENST00000497960 RGS7BPQ6MZT1 257 aaPredicted RBP13.19□□□□□ -0.3
NUP50-219ENST00000497960 SLC27A4Q6P1M0 643 aa13.19□□□□□ -0.3
NUP50-219ENST00000497960 LEG1Q6P5S2 330 aa13.19□□□□□ -0.3
NUP50-219ENST00000497960 ZCCHC24Q8N2G6 241 aaKnown RBP13.19□□□□□ -0.3
NUP50-219ENST00000497960 CBR4Q8N4T8 237 aa13.19□□□□□ -0.3
NUP50-219ENST00000497960 ZNF540Q8NDQ6 660 aa13.19□□□□□ -0.3
NUP50-219ENST00000497960 SDR9C7Q8NEX9 313 aa13.19□□□□□ -0.3
NUP50-219ENST00000497960 OR4Q3Q8NH05 313 aa13.19□□□□□ -0.3
NUP50-219ENST00000497960 NABP1Q96AH0 204 aa13.19□□□□□ -0.3
NUP50-219ENST00000497960 FOXN4Q96NZ1 517 aa13.19□□□□□ -0.3
NUP50-219ENST00000497960 MS4A5Q9H3V2 200 aa13.19□□□□□ -0.3
NUP50-219ENST00000497960 RIBC2Q9H4K1 309 aa13.19□□□□□ -0.3
NUP50-219ENST00000497960 DUSP13Q9UII6 198 aa13.19□□□□□ -0.3
NUP50-219ENST00000497960 TMEFF2Q9UIK5 374 aaPredicted RBP13.19□□□□□ -0.3
NUP50-219ENST00000497960 RRP15Q9Y3B9 282 aaKnown RBP13.19□□□□□ -0.3
NUP50-219ENST00000497960 A0A1W2PPL8 197 aa13.18□□□□□ -0.3
NUP50-219ENST00000497960 A0A1W2PPW3 197 aa13.18□□□□□ -0.3
NUP50-219ENST00000497960 PRSS37A4D1T9 235 aa13.18□□□□□ -0.3
NUP50-219ENST00000497960 IDH3BO43837 385 aa13.18□□□□□ -0.3
NUP50-219ENST00000497960 AHCYL1O43865 530 aa13.18□□□□□ -0.3
NUP50-219ENST00000497960 SNAP29O95721 258 aa13.18□□□□□ -0.3
NUP50-219ENST00000497960 RENP00797 406 aa13.18□□□□□ -0.3
NUP50-219ENST00000497960 LCKP06239 509 aa13.18□□□□□ -0.3
NUP50-219ENST00000497960 FAM157BP0CG42 384 aa13.18□□□□□ -0.3
NUP50-219ENST00000497960 DAOP14920 347 aa13.18□□□□□ -0.3
NUP50-219ENST00000497960 ZNF32P17041 273 aa13.18□□□□□ -0.3
NUP50-219ENST00000497960 APEX1P27695 318 aaKnown RBP13.18□□□□□ -0.3
NUP50-219ENST00000497960 GRK5P34947 590 aa13.18□□□□□ -0.3
NUP50-219ENST00000497960 NR4A2P43354 598 aa13.18□□□□□ -0.3
NUP50-219ENST00000497960 ALDH3A2P51648 485 aa13.18□□□□□ -0.3
NUP50-219ENST00000497960 CRISP1P54107 249 aa13.18□□□□□ -0.3
NUP50-219ENST00000497960 RAD23AP54725 363 aa13.18□□□□□ -0.3
NUP50-219ENST00000497960 PCBD1P61457 104 aa13.18□□□□□ -0.3
NUP50-219ENST00000497960 ESRRGP62508 458 aa13.18□□□□□ -0.3
NUP50-219ENST00000497960 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.18□□□□□ -0.3
NUP50-219ENST00000497960 GGTLC2Q14390 218 aa13.18□□□□□ -0.3
NUP50-219ENST00000497960 MSMPQ1L6U9 139 aa13.18□□□□□ -0.3
NUP50-219ENST00000497960 FAM27BQ5VT28 67 aa13.18□□□□□ -0.3
NUP50-219ENST00000497960 ZBTB49Q6ZSB9 765 aa13.18□□□□□ -0.3
NUP50-219ENST00000497960 PTCHD4Q6ZW05 846 aa13.18□□□□□ -0.3
NUP50-219ENST00000497960 ALDH16A1Q8IZ83 802 aa13.18□□□□□ -0.3
NUP50-219ENST00000497960 LNX2Q8N448 690 aa13.18□□□□□ -0.3
NUP50-219ENST00000497960 PAQR4Q8N4S7 273 aaPredicted RBP13.18□□□□□ -0.3
NUP50-219ENST00000497960 OR4K13Q8NH42 304 aa13.18□□□□□ -0.3
NUP50-219ENST00000497960 TEX12Q9BXU0 123 aa13.18□□□□□ -0.3
NUP50-219ENST00000497960 BCL2L14Q9BZR8 327 aa13.18□□□□□ -0.3
NUP50-219ENST00000497960 SYT4Q9H2B2 425 aa13.18□□□□□ -0.3
NUP50-219ENST00000497960 RNPEPL1Q9HAU8 725 aa13.18□□□□□ -0.3
NUP50-219ENST00000497960 USE1Q9NZ43 259 aa13.18□□□□□ -0.3
NUP50-219ENST00000497960 GPR160Q9UJ42 338 aa13.18□□□□□ -0.3
NUP50-219ENST00000497960 KLHL21Q9UJP4 597 aa13.18□□□□□ -0.3
NUP50-219ENST00000497960 FZR1Q9UM11 496 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms