RNA–Protein interactions for RNA: ENST00000497597.5

TRAPPC12-223, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 3,401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-223ENST00000497597 CTNNB1P35222 781 aa9.62□□□□□ -0.87
TRAPPC12-223ENST00000497597 FHITP49789 147 aa9.62□□□□□ -0.87
TRAPPC12-223ENST00000497597 RIDAP52758 137 aaKnown RBP9.62□□□□□ -0.87
TRAPPC12-223ENST00000497597 RAB32Q13637 225 aa9.62□□□□□ -0.87
TRAPPC12-223ENST00000497597 COX15Q7KZN9 410 aa9.62□□□□□ -0.87
TRAPPC12-223ENST00000497597 FJX1Q86VR8 437 aa9.62□□□□□ -0.87
TRAPPC12-223ENST00000497597 OR51A2Q8NGJ7 313 aa9.62□□□□□ -0.87
TRAPPC12-223ENST00000497597 CXorf40AQ8TE69 158 aa9.62□□□□□ -0.87
TRAPPC12-223ENST00000497597 CCDC74AQ96AQ1 378 aa9.62□□□□□ -0.87
TRAPPC12-223ENST00000497597 MS4A6EQ96DS6 147 aa9.62□□□□□ -0.87
TRAPPC12-223ENST00000497597 CPEB1Q9BZB8 566 aaKnown RBP9.62□□□□□ -0.87
TRAPPC12-223ENST00000497597 LANCL2Q9NS86 450 aa9.62□□□□□ -0.87
TRAPPC12-223ENST00000497597 PPP4R1LQ9P1A2 415 aa9.62□□□□□ -0.87
TRAPPC12-223ENST00000497597 FBXL21Q9UKT6 434 aa9.62□□□□□ -0.87
TRAPPC12-223ENST00000497597 CARHSP1Q9Y2V2 147 aaKnown RBP9.62□□□□□ -0.87
TRAPPC12-223ENST00000497597 INSL5Q9Y5Q6 135 aa9.62□□□□□ -0.87
TRAPPC12-223ENST00000497597 A0A0A6YYD5 115 aa9.61□□□□□ -0.87
TRAPPC12-223ENST00000497597 LOC100289279A0A1B0GTE1 492 aa9.61□□□□□ -0.87
TRAPPC12-223ENST00000497597 UBE2CO00762 179 aa9.61□□□□□ -0.87
TRAPPC12-223ENST00000497597 PPP1R2P9O14990 202 aa9.61□□□□□ -0.87
TRAPPC12-223ENST00000497597 MBTPS2O43462 519 aa9.61□□□□□ -0.87
TRAPPC12-223ENST00000497597 KLF4O43474 513 aa9.61□□□□□ -0.87
TRAPPC12-223ENST00000497597 DNAJB6O75190 326 aa9.61□□□□□ -0.87
TRAPPC12-223ENST00000497597 CRHP06850 196 aa9.61□□□□□ -0.87
TRAPPC12-223ENST00000497597 SERPINA2P20848 420 aa9.61□□□□□ -0.87
TRAPPC12-223ENST00000497597 SLC2A5P22732 501 aa9.61□□□□□ -0.87
TRAPPC12-223ENST00000497597 OR3A2P47893 321 aa9.61□□□□□ -0.87
TRAPPC12-223ENST00000497597 SULT1A1P50225 295 aa9.61□□□□□ -0.87
TRAPPC12-223ENST00000497597 EMDP50402 254 aa9.61□□□□□ -0.87
TRAPPC12-223ENST00000497597 P2RY4P51582 365 aa9.61□□□□□ -0.87
TRAPPC12-223ENST00000497597 CLDN6P56747 220 aa9.61□□□□□ -0.87
TRAPPC12-223ENST00000497597 ACTR1AP61163 376 aa9.61□□□□□ -0.87
TRAPPC12-223ENST00000497597 HTRA3P83110 453 aa9.61□□□□□ -0.87
TRAPPC12-223ENST00000497597 SRSF5Q13243 272 aaKnown RBP9.61□□□□□ -0.87
TRAPPC12-223ENST00000497597 BATFQ16520 125 aa9.61□□□□□ -0.87
TRAPPC12-223ENST00000497597 MEP1BQ16820 701 aa9.61□□□□□ -0.87
TRAPPC12-223ENST00000497597 CLEC12BQ2HXU8 276 aa9.61□□□□□ -0.87
TRAPPC12-223ENST00000497597 OR2L3Q8NG85 312 aa9.61□□□□□ -0.87
TRAPPC12-223ENST00000497597 TRIM2Q9C040 744 aa9.61□□□□□ -0.87
TRAPPC12-223ENST00000497597 SDHAF3Q9NRP4 125 aa9.61□□□□□ -0.87
TRAPPC12-223ENST00000497597 DNAJB11Q9UBS4 358 aa9.61□□□□□ -0.87
TRAPPC12-223ENST00000497597 HS3ST2Q9Y278 367 aa9.61□□□□□ -0.87
TRAPPC12-223ENST00000497597 HTR2CP28335 458 aa9.61□□□□□ -0.87
TRAPPC12-223ENST00000497597 CAV2P51636 162 aa9.61□□□□□ -0.87
TRAPPC12-223ENST00000497597 REEP5Q00765 189 aa9.61□□□□□ -0.87
TRAPPC12-223ENST00000497597 ACY1Q03154 408 aa9.61□□□□□ -0.87
TRAPPC12-223ENST00000497597 GFI1BQ5VTD9 330 aa9.61□□□□□ -0.87
TRAPPC12-223ENST00000497597 MDGA2Q7Z553 956 aa9.61□□□□□ -0.87
TRAPPC12-223ENST00000497597 LINC01555Q8NAE3 123 aa9.61□□□□□ -0.87
TRAPPC12-223ENST00000497597 OR4N2Q8NGD1 307 aa9.61□□□□□ -0.87
TRAPPC12-223ENST00000497597 HCFC1R1Q9NWW0 138 aa9.61□□□□□ -0.87
TRAPPC12-223ENST00000497597 TREM2Q9NZC2 230 aa9.61□□□□□ -0.87
TRAPPC12-223ENST00000497597 GRHPRQ9UBQ7 328 aa9.61□□□□□ -0.87
TRAPPC12-223ENST00000497597 MRM2Q9UI43 246 aaKnown RBP9.61□□□□□ -0.87
TRAPPC12-223ENST00000497597 WIF1Q9Y5W5 379 aa9.61□□□□□ -0.87
TRAPPC12-223ENST00000497597 TMEM189-UBE2V1I3L0A0 370 aa9.6□□□□□ -0.87
TRAPPC12-223ENST00000497597 H2AFB1P0C5Y9 115 aa9.6□□□□□ -0.87
TRAPPC12-223ENST00000497597 NID1P14543 1247 aa9.6□□□□□ -0.87
TRAPPC12-223ENST00000497597 GNB3P16520 340 aa9.6□□□□□ -0.87
TRAPPC12-223ENST00000497597 NTHL1P78549 312 aa9.6□□□□□ -0.87
TRAPPC12-223ENST00000497597 PRDX1Q06830 199 aaKnown RBP9.6□□□□□ -0.87
TRAPPC12-223ENST00000497597 PMPCAQ10713 525 aa9.6□□□□□ -0.87
TRAPPC12-223ENST00000497597 VWA2Q5GFL6 755 aa9.6□□□□□ -0.87
TRAPPC12-223ENST00000497597 ZNF343Q6P1L6 599 aa9.6□□□□□ -0.87
TRAPPC12-223ENST00000497597 OR2L5Q8NG80 312 aa9.6□□□□□ -0.87
TRAPPC12-223ENST00000497597 FAM213BQ8TBF2 198 aa9.6□□□□□ -0.87
TRAPPC12-223ENST00000497597 TRMT2BQ96GJ1 504 aaKnown RBP9.6□□□□□ -0.87
TRAPPC12-223ENST00000497597 PRRT1Q99946 306 aa9.6□□□□□ -0.87
TRAPPC12-223ENST00000497597 APOBEC3BQ9UH17 382 aaKnown RBP9.6□□□□□ -0.87
TRAPPC12-223ENST00000497597 DMRT1Q9Y5R6 373 aa9.6□□□□□ -0.87
TRAPPC12-223ENST00000497597 KPTNQ9Y664 436 aa9.6□□□□□ -0.87
TRAPPC12-223ENST00000497597 CLEC3AO75596 197 aa9.6□□□□□ -0.87
TRAPPC12-223ENST00000497597 NGFRP08138 427 aa9.6□□□□□ -0.87
TRAPPC12-223ENST00000497597 GDI1P31150 447 aa9.6□□□□□ -0.87
TRAPPC12-223ENST00000497597 CDKN2AP42771 156 aaKnown RBP9.6□□□□□ -0.87
TRAPPC12-223ENST00000497597 FLT3LGP49771 235 aa9.6□□□□□ -0.87
TRAPPC12-223ENST00000497597 ALG11Q2TAA5 492 aa9.6□□□□□ -0.87
TRAPPC12-223ENST00000497597 KIRREL2Q6UWL6 708 aa9.6□□□□□ -0.87
TRAPPC12-223ENST00000497597 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.6□□□□□ -0.87
TRAPPC12-223ENST00000497597 APCDD1LQ8NCL9 501 aa9.6□□□□□ -0.87
TRAPPC12-223ENST00000497597 SFXN5Q8TD22 340 aa9.6□□□□□ -0.87
TRAPPC12-223ENST00000497597 ST6GALNAC5Q9BVH7 336 aa9.6□□□□□ -0.87
TRAPPC12-223ENST00000497597 STARD5Q9NSY2 213 aa9.6□□□□□ -0.87
TRAPPC12-223ENST00000497597 FLRT3Q9NZU0 649 aa9.6□□□□□ -0.87
TRAPPC12-223ENST00000497597 METTL1Q9UBP6 276 aaKnown RBP9.6□□□□□ -0.87
TRAPPC12-223ENST00000497597 MED12Q93074 2177 aa9.6□□□□□ -0.87
TRAPPC12-223ENST00000497597 A0A087WZY1 265 aa9.6□□□□□ -0.87
TRAPPC12-223ENST00000497597 TERTO14746 1132 aaKnown RBP9.6□□□□□ -0.87
TRAPPC12-223ENST00000497597 SCAF4O95104 1147 aaKnown RBP9.6□□□□□ -0.87
TRAPPC12-223ENST00000497597 CSTAP01040 98 aa9.6□□□□□ -0.87
TRAPPC12-223ENST00000497597 CD74P04233 296 aa9.6□□□□□ -0.87
TRAPPC12-223ENST00000497597 AFF3P51826 1226 aaKnown RBP9.6□□□□□ -0.87
TRAPPC12-223ENST00000497597 RAP1AP62834 184 aa9.6□□□□□ -0.87
TRAPPC12-223ENST00000497597 SOHLH1Q5JUK2 328 aa9.6□□□□□ -0.87
TRAPPC12-223ENST00000497597 FCRL6Q6DN72 434 aa9.6□□□□□ -0.87
TRAPPC12-223ENST00000497597 TMEM64Q6YI46 380 aa9.6□□□□□ -0.87
TRAPPC12-223ENST00000497597 IL34Q6ZMJ4 242 aa9.6□□□□□ -0.87
TRAPPC12-223ENST00000497597 BEND4Q6ZU67 534 aa9.6□□□□□ -0.87
TRAPPC12-223ENST00000497597 RNF113BQ8IZP6 322 aaKnown RBP9.6□□□□□ -0.87
TRAPPC12-223ENST00000497597 OR13C8Q8NGS7 320 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms