RNA–Protein interactions for RNA: ENST00000496393.2

NVL-223, Transcript of nuclear VCP-like, human

TSL 3

Gene NVL, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NVL-223	ENST00000496393	HOXB9	P17482	250 aa	Predicted RBP	6.54	□□□□□ -1.36
NVL-223	ENST00000496393	TNFRSF1A	P19438	455 aa		6.54	□□□□□ -1.36
NVL-223	ENST00000496393	LAP3	P28838	519 aa		6.54	□□□□□ -1.36
NVL-223	ENST00000496393	LIPA	P38571	399 aa		6.54	□□□□□ -1.36
NVL-223	ENST00000496393	RPL18	Q07020	188 aa	Known RBP	6.54	□□□□□ -1.36
NVL-223	ENST00000496393	TOP3A	Q13472	1001 aa	Predicted RBP	6.54	□□□□□ -1.36
NVL-223	ENST00000496393	MPP2	Q14168	576 aa		6.54	□□□□□ -1.36
NVL-223	ENST00000496393	HLX	Q14774	488 aa	Predicted RBP	6.54	□□□□□ -1.36
NVL-223	ENST00000496393	HIST3H3	Q16695	136 aa		6.54	□□□□□ -1.36
NVL-223	ENST00000496393	NRN1L	Q496H8	165 aa		6.54	□□□□□ -1.36
NVL-223	ENST00000496393	ENTPD8	Q5MY95	495 aa		6.54	□□□□□ -1.36
NVL-223	ENST00000496393	C10orf128	Q5T292	105 aa		6.54	□□□□□ -1.36
NVL-223	ENST00000496393	GPR157	Q5UAW9	335 aa		6.54	□□□□□ -1.36
NVL-223	ENST00000496393	SLC27A4	Q6P1M0	643 aa		6.54	□□□□□ -1.36
NVL-223	ENST00000496393	TTC33	Q6PID6	262 aa	Predicted RBP	6.54	□□□□□ -1.36
NVL-223	ENST00000496393	UNQ6126/PRO20091	Q6UXV3	157 aa		6.54	□□□□□ -1.36
NVL-223	ENST00000496393		Q6YL49	198 aa		6.54	□□□□□ -1.36
NVL-223	ENST00000496393		Q6ZPA2	131 aa		6.54	□□□□□ -1.36
NVL-223	ENST00000496393	MSANTD1	Q6ZTZ1	278 aa		6.54	□□□□□ -1.36
NVL-223	ENST00000496393	HIST3H2A	Q7L7L0	130 aa		6.54	□□□□□ -1.36
NVL-223	ENST00000496393	TSPYL5	Q86VY4	417 aa	Predicted RBP	6.54	□□□□□ -1.36
NVL-223	ENST00000496393	RBM45	Q8IUH3	476 aa	Known RBP	6.54	□□□□□ -1.36
NVL-223	ENST00000496393	ARMC8	Q8IUR7	673 aa		6.54	□□□□□ -1.36
NVL-223	ENST00000496393	C1orf174	Q8IYL3	243 aa		6.54	□□□□□ -1.36
NVL-223	ENST00000496393	OR5AS1	Q8N127	324 aa		6.54	□□□□□ -1.36
NVL-223	ENST00000496393	MUC20	Q8N307	709 aa	Predicted RBP	6.54	□□□□□ -1.36
NVL-223	ENST00000496393	CLDN22	Q8N7P3	220 aa		6.54	□□□□□ -1.36
NVL-223	ENST00000496393	ANKRD42	Q8N9B4	389 aa		6.54	□□□□□ -1.36
NVL-223	ENST00000496393	OR10AD1	Q8NGE0	317 aa		6.54	□□□□□ -1.36
NVL-223	ENST00000496393	OR4D11	Q8NGI4	311 aa		6.54	□□□□□ -1.36
NVL-223	ENST00000496393	OR6T1	Q8NGN1	323 aa		6.54	□□□□□ -1.36
NVL-223	ENST00000496393	RAB40A	Q8WXH6	277 aa		6.54	□□□□□ -1.36
NVL-223	ENST00000496393	HDAC2	Q92769	488 aa	Known RBP	6.54	□□□□□ -1.36
NVL-223	ENST00000496393	HIST1H2AC	Q93077	130 aa		6.54	□□□□□ -1.36
NVL-223	ENST00000496393	HSH2D	Q96JZ2	352 aa		6.54	□□□□□ -1.36
NVL-223	ENST00000496393	C4orf45	Q96LM5	186 aa		6.54	□□□□□ -1.36
NVL-223	ENST00000496393	OR52B2	Q96RD2	323 aa		6.54	□□□□□ -1.36
NVL-223	ENST00000496393	SLC30A2	Q9BRI3	323 aa		6.54	□□□□□ -1.36
NVL-223	ENST00000496393	NUDT16L1	Q9BRJ7	211 aa	Known RBP	6.54	□□□□□ -1.36
NVL-223	ENST00000496393	PCGF1	Q9BSM1	259 aa		6.54	□□□□□ -1.36
NVL-223	ENST00000496393	MRPL13	Q9BYD1	178 aa	Known RBP	6.54	□□□□□ -1.36
NVL-223	ENST00000496393	OR2H1	Q9GZK4	316 aa		6.54	□□□□□ -1.36
NVL-223	ENST00000496393	IKZF5	Q9H5V7	419 aa		6.54	□□□□□ -1.36
NVL-223	ENST00000496393	SIAE	Q9HAT2	523 aa		6.54	□□□□□ -1.36
NVL-223	ENST00000496393	SLCO1B3	Q9NPD5	702 aa		6.54	□□□□□ -1.36
NVL-223	ENST00000496393	ZIM2	Q9NZV7	527 aa		6.54	□□□□□ -1.36
NVL-223	ENST00000496393	SLAMF8	Q9P0V8	285 aa		6.54	□□□□□ -1.36
NVL-223	ENST00000496393	IL20RA	Q9UHF4	553 aa		6.54	□□□□□ -1.36
NVL-223	ENST00000496393	KLHL21	Q9UJP4	597 aa		6.54	□□□□□ -1.36
NVL-223	ENST00000496393	ZNF229	Q9UJW7	825 aa		6.54	□□□□□ -1.36
NVL-223	ENST00000496393	SLC7A7	Q9UM01	511 aa		6.54	□□□□□ -1.36
NVL-223	ENST00000496393		A0A1W2PPL8	197 aa		6.53	□□□□□ -1.36
NVL-223	ENST00000496393		A0A1W2PRG6	482 aa		6.53	□□□□□ -1.36
NVL-223	ENST00000496393	PRORSD1P	A6NEY8	169 aa		6.53	□□□□□ -1.36
NVL-223	ENST00000496393	TRPC5OS	A6NMA1	111 aa		6.53	□□□□□ -1.36
NVL-223	ENST00000496393	C22orf46	C9J442	243 aa		6.53	□□□□□ -1.36
NVL-223	ENST00000496393	FMO6P	O60774	539 aa		6.53	□□□□□ -1.36
NVL-223	ENST00000496393	LYPD3	O95274	346 aa		6.53	□□□□□ -1.36
NVL-223	ENST00000496393	IGHV4-59	P01825	116 aa		6.53	□□□□□ -1.36
NVL-223	ENST00000496393	ASAH2B	P0C7U1	165 aa		6.53	□□□□□ -1.36
NVL-223	ENST00000496393	PPIAL4G	P0DN37	164 aa		6.53	□□□□□ -1.36
NVL-223	ENST00000496393	GSTM3	P21266	225 aa		6.53	□□□□□ -1.36
NVL-223	ENST00000496393	SLC6A2	P23975	617 aa		6.53	□□□□□ -1.36
NVL-223	ENST00000496393	AQP2	P41181	271 aa		6.53	□□□□□ -1.36
NVL-223	ENST00000496393	PITPNB	P48739	271 aa		6.53	□□□□□ -1.36
NVL-223	ENST00000496393	ARHGDIA	P52565	204 aa		6.53	□□□□□ -1.36
NVL-223	ENST00000496393	UGT2B15	P54855	530 aa		6.53	□□□□□ -1.36
NVL-223	ENST00000496393	PROK1	P58294	105 aa		6.53	□□□□□ -1.36
NVL-223	ENST00000496393	MRPS34	P82930	218 aa	Known RBP	6.53	□□□□□ -1.36
NVL-223	ENST00000496393	HOXA4	Q00056	320 aa	Predicted RBP	6.53	□□□□□ -1.36
NVL-223	ENST00000496393	PDCD1	Q15116	288 aa		6.53	□□□□□ -1.36
NVL-223	ENST00000496393	FAM189A2	Q15884	450 aa		6.53	□□□□□ -1.36
NVL-223	ENST00000496393	BEAN1	Q3B7T3	259 aa		6.53	□□□□□ -1.36
NVL-223	ENST00000496393	KRT71	Q3SY84	523 aa		6.53	□□□□□ -1.36
NVL-223	ENST00000496393	TTMP	Q5BVD1	217 aa		6.53	□□□□□ -1.36
NVL-223	ENST00000496393	OTP	Q5XKR4	325 aa		6.53	□□□□□ -1.36
NVL-223	ENST00000496393	C1orf94	Q6P1W5	598 aa		6.53	□□□□□ -1.36
NVL-223	ENST00000496393	ZNF613	Q6PF04	617 aa		6.53	□□□□□ -1.36
NVL-223	ENST00000496393	ZNF620	Q6ZNG0	422 aa		6.53	□□□□□ -1.36
NVL-223	ENST00000496393	MAVS	Q7Z434	540 aa		6.53	□□□□□ -1.36
NVL-223	ENST00000496393	KIRREL3	Q8IZU9	778 aa		6.53	□□□□□ -1.36
NVL-223	ENST00000496393	FITM2	Q8N6M3	262 aa		6.53	□□□□□ -1.36
NVL-223	ENST00000496393	EIF1AD	Q8N9N8	165 aa	Known RBP	6.53	□□□□□ -1.36
NVL-223	ENST00000496393	ATG16L2	Q8NAA4	619 aa		6.53	□□□□□ -1.36
NVL-223	ENST00000496393	C19orf18	Q8NEA5	215 aa		6.53	□□□□□ -1.36
NVL-223	ENST00000496393	GPR32P1	Q8NGA4	272 aa		6.53	□□□□□ -1.36
NVL-223	ENST00000496393	OR8B3	Q8NGG8	313 aa		6.53	□□□□□ -1.36
NVL-223	ENST00000496393	MOSPD2	Q8NHP6	518 aa		6.53	□□□□□ -1.36
NVL-223	ENST00000496393	PFN4	Q8NHR9	129 aa		6.53	□□□□□ -1.36
NVL-223	ENST00000496393	LINC01006	Q8NI28	216 aa		6.53	□□□□□ -1.36
NVL-223	ENST00000496393	ADAMTS16	Q8TE57	1224 aa		6.53	□□□□□ -1.36
NVL-223	ENST00000496393	DACT3	Q96B18	629 aa	Predicted RBP	6.53	□□□□□ -1.36
NVL-223	ENST00000496393	CMBL	Q96DG6	245 aa		6.53	□□□□□ -1.36
NVL-223	ENST00000496393	NEIL1	Q96FI4	390 aa	Predicted RBP	6.53	□□□□□ -1.36
NVL-223	ENST00000496393	THOC1	Q96FV9	657 aa	Known RBP	6.53	□□□□□ -1.36
NVL-223	ENST00000496393	PLEKHA8	Q96JA3	519 aa		6.53	□□□□□ -1.36
NVL-223	ENST00000496393	SAMD8	Q96LT4	415 aa		6.53	□□□□□ -1.36
NVL-223	ENST00000496393	OR8B2	Q96RD0	313 aa		6.53	□□□□□ -1.36
NVL-223	ENST00000496393	ZNF607	Q96SK3	696 aa		6.53	□□□□□ -1.36
NVL-223	ENST00000496393	TMEM246	Q9BRR3	403 aa		6.53	□□□□□ -1.36

Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms