RNA–Protein interactions for RNA: ENST00000496347.1

HDAC4-213, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 995 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-213ENST00000496347 TGFAP01135 160 aa13.42□□□□□ -0.26
HDAC4-213ENST00000496347 TFP02787 698 aa13.42□□□□□ -0.26
HDAC4-213ENST00000496347 LYNX1P0DP58 116 aa13.42□□□□□ -0.26
HDAC4-213ENST00000496347 TUBG1P23258 451 aa13.42□□□□□ -0.26
HDAC4-213ENST00000496347 SLC6A6P31641 620 aa13.42□□□□□ -0.26
HDAC4-213ENST00000496347 IL2RGP31785 369 aa13.42□□□□□ -0.26
HDAC4-213ENST00000496347 LIPAP38571 399 aa13.42□□□□□ -0.26
HDAC4-213ENST00000496347 MAGEB1P43366 347 aa13.42□□□□□ -0.26
HDAC4-213ENST00000496347 HTR5AP47898 357 aa13.42□□□□□ -0.26
HDAC4-213ENST00000496347 CDH15P55291 814 aa13.42□□□□□ -0.26
HDAC4-213ENST00000496347 PPP1CBP62140 327 aa13.42□□□□□ -0.26
HDAC4-213ENST00000496347 LSM6P62312 80 aaKnown RBP13.42□□□□□ -0.26
HDAC4-213ENST00000496347 TEKQ02763 1124 aa13.42□□□□□ -0.26
HDAC4-213ENST00000496347 GLO1Q04760 184 aa13.42□□□□□ -0.26
HDAC4-213ENST00000496347 ALKBH6Q3KRA9 238 aa13.42□□□□□ -0.26
HDAC4-213ENST00000496347 SPATA46Q5T0L3 261 aa13.42□□□□□ -0.26
HDAC4-213ENST00000496347 CXXC5Q7LFL8 322 aaKnown RBP13.42□□□□□ -0.26
HDAC4-213ENST00000496347 ARHGAP24Q8N264 748 aa13.42□□□□□ -0.26
HDAC4-213ENST00000496347 KLF14Q8TD94 323 aaPredicted RBP13.42□□□□□ -0.26
HDAC4-213ENST00000496347 SOX7Q9BT81 388 aa13.42□□□□□ -0.26
HDAC4-213ENST00000496347 MUC13Q9H3R2 512 aa13.42□□□□□ -0.26
HDAC4-213ENST00000496347 SAP30LQ9HAJ7 183 aa13.42□□□□□ -0.26
HDAC4-213ENST00000496347 TUBG2Q9NRH3 451 aa13.42□□□□□ -0.26
HDAC4-213ENST00000496347 ZNF275Q9NSD4 429 aaPredicted RBP13.42□□□□□ -0.26
HDAC4-213ENST00000496347 J3QW42 95 aa13.41□□□□□ -0.26
HDAC4-213ENST00000496347 IMPA2O14732 288 aa13.41□□□□□ -0.26
HDAC4-213ENST00000496347 ARPC3O15145 178 aa13.41□□□□□ -0.26
HDAC4-213ENST00000496347 OR10H3O60404 316 aa13.41□□□□□ -0.26
HDAC4-213ENST00000496347 SLC16A7O60669 478 aa13.41□□□□□ -0.26
HDAC4-213ENST00000496347 SRD5A1P18405 259 aa13.41□□□□□ -0.26
HDAC4-213ENST00000496347 GSTM3P21266 225 aa13.41□□□□□ -0.26
HDAC4-213ENST00000496347 PCMT1P22061 227 aa13.41□□□□□ -0.26
HDAC4-213ENST00000496347 CRABP1P29762 137 aa13.41□□□□□ -0.26
HDAC4-213ENST00000496347 RRM2P31350 389 aa13.41□□□□□ -0.26
HDAC4-213ENST00000496347 THBS2P35442 1172 aa13.41□□□□□ -0.26
HDAC4-213ENST00000496347 ZNF81P51508 661 aa13.41□□□□□ -0.26
HDAC4-213ENST00000496347 CCL8P80075 99 aa13.41□□□□□ -0.26
HDAC4-213ENST00000496347 FAM120AOSQ5T036 256 aa13.41□□□□□ -0.26
HDAC4-213ENST00000496347 PTCHD4Q6ZW05 846 aa13.41□□□□□ -0.26
HDAC4-213ENST00000496347 VASH1Q7L8A9 365 aaPredicted RBP13.41□□□□□ -0.26
HDAC4-213ENST00000496347 ZER1Q7Z7L7 766 aa13.41□□□□□ -0.26
HDAC4-213ENST00000496347 SLC25A40Q8TBP6 338 aa13.41□□□□□ -0.26
HDAC4-213ENST00000496347 YIPF5Q969M3 257 aa13.41□□□□□ -0.26
HDAC4-213ENST00000496347 C4orf45Q96LM5 186 aa13.41□□□□□ -0.26
HDAC4-213ENST00000496347 MDFIQ99750 246 aa13.41□□□□□ -0.26
HDAC4-213ENST00000496347 GPA33Q99795 319 aa13.41□□□□□ -0.26
HDAC4-213ENST00000496347 OR2J1Q9GZK6 312 aa13.41□□□□□ -0.26
HDAC4-213ENST00000496347 RACGAP1Q9H0H5 632 aa13.41□□□□□ -0.26
HDAC4-213ENST00000496347 OR52D1Q9H346 318 aa13.41□□□□□ -0.26
HDAC4-213ENST00000496347 TBCCD1Q9NVR7 557 aa13.41□□□□□ -0.26
HDAC4-213ENST00000496347 ACTR3BQ9P1U1 418 aa13.41□□□□□ -0.26
HDAC4-213ENST00000496347 ASH2LQ9UBL3 628 aa13.41□□□□□ -0.26
HDAC4-213ENST00000496347 IL20RAQ9UHF4 553 aa13.41□□□□□ -0.26
HDAC4-213ENST00000496347 TMCC3Q9ULS5 477 aa13.41□□□□□ -0.26
HDAC4-213ENST00000496347 POLR1DQ9Y2S0 133 aa13.41□□□□□ -0.26
HDAC4-213ENST00000496347 IER3IP1Q9Y5U9 82 aa13.41□□□□□ -0.26
HDAC4-213ENST00000496347 IGHV1-69-2A0A0G2JMI3 117 aa13.4□□□□□ -0.26
HDAC4-213ENST00000496347 OR6C6A6NF89 314 aa13.4□□□□□ -0.26
HDAC4-213ENST00000496347 B4DSR2 109 aa13.4□□□□□ -0.26
HDAC4-213ENST00000496347 KRT36O76013 467 aa13.4□□□□□ -0.26
HDAC4-213ENST00000496347 PPP1R3DO95685 299 aa13.4□□□□□ -0.26
HDAC4-213ENST00000496347 FAM107AO95990 144 aa13.4□□□□□ -0.26
HDAC4-213ENST00000496347 SCG5P05408 212 aa13.4□□□□□ -0.26
HDAC4-213ENST00000496347 ADH4P08319 380 aa13.4□□□□□ -0.26
HDAC4-213ENST00000496347 MSX2P35548 267 aaPredicted RBP13.4□□□□□ -0.26
HDAC4-213ENST00000496347 MPV17P39210 176 aa13.4□□□□□ -0.26
HDAC4-213ENST00000496347 MMP15P51511 669 aa13.4□□□□□ -0.26
HDAC4-213ENST00000496347 CCNIQ14094 377 aa13.4□□□□□ -0.26
HDAC4-213ENST00000496347 KCNMB1Q16558 191 aa13.4□□□□□ -0.26
HDAC4-213ENST00000496347 RPL13AP3Q6NVV1 102 aa13.4□□□□□ -0.26
HDAC4-213ENST00000496347 ZNF620Q6ZNG0 422 aa13.4□□□□□ -0.26
HDAC4-213ENST00000496347 JAZF1Q86VZ6 243 aa13.4□□□□□ -0.26
HDAC4-213ENST00000496347 ZDHHC21Q8IVQ6 265 aa13.4□□□□□ -0.26
HDAC4-213ENST00000496347 POP5Q969H6 163 aaKnown RBP13.4□□□□□ -0.26
HDAC4-213ENST00000496347 COG8Q96MW5 612 aa13.4□□□□□ -0.26
HDAC4-213ENST00000496347 CCT8L2Q96SF2 557 aa13.4□□□□□ -0.26
HDAC4-213ENST00000496347 DIRC2Q96SL1 478 aa13.4□□□□□ -0.26
HDAC4-213ENST00000496347 NUAK2Q9H093 628 aa13.4□□□□□ -0.26
HDAC4-213ENST00000496347 DECR2Q9NUI1 292 aa13.4□□□□□ -0.26
HDAC4-213ENST00000496347 PLEK2Q9NYT0 353 aa13.4□□□□□ -0.26
HDAC4-213ENST00000496347 PPIHO43447 177 aaKnown RBP13.39□□□□□ -0.27
HDAC4-213ENST00000496347 GAAP10253 952 aa13.39□□□□□ -0.27
HDAC4-213ENST00000496347 ATP6V1B2P21281 511 aa13.39□□□□□ -0.27
HDAC4-213ENST00000496347 COL8A2P25067 703 aa13.39□□□□□ -0.27
HDAC4-213ENST00000496347 CRYBB2P43320 205 aa13.39□□□□□ -0.27
HDAC4-213ENST00000496347 MAGEA2P43356 314 aa13.39□□□□□ -0.27
HDAC4-213ENST00000496347 GSSP48637 474 aa13.39□□□□□ -0.27
HDAC4-213ENST00000496347 DVL1P1P54792 670 aaPredicted RBP13.39□□□□□ -0.27
HDAC4-213ENST00000496347 RFX4Q33E94 735 aa13.39□□□□□ -0.27
HDAC4-213ENST00000496347 TMEM255AQ5JRV8 349 aa13.39□□□□□ -0.27
HDAC4-213ENST00000496347 C1orf94Q6P1W5 598 aa13.39□□□□□ -0.27
HDAC4-213ENST00000496347 LINC00471Q8N535 108 aa13.39□□□□□ -0.27
HDAC4-213ENST00000496347 FITM2Q8N6M3 262 aa13.39□□□□□ -0.27
HDAC4-213ENST00000496347 CLDND2Q8NHS1 167 aa13.39□□□□□ -0.27
HDAC4-213ENST00000496347 GTF3AQ92664 365 aaKnown RBP13.39□□□□□ -0.27
HDAC4-213ENST00000496347 ELMOD3Q96FG2 381 aa13.39□□□□□ -0.27
HDAC4-213ENST00000496347 ERMAPQ96PL5 475 aaPredicted RBP13.39□□□□□ -0.27
HDAC4-213ENST00000496347 EGLN1Q9GZT9 426 aa13.39□□□□□ -0.27
HDAC4-213ENST00000496347 HDHD2Q9H0R4 259 aa13.39□□□□□ -0.27
HDAC4-213ENST00000496347 RERGLQ9H628 205 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms