RNA–Protein interactions for RNA: ENST00000496116.1

CMSS1-208, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 1 (best)

Gene CMSS1, Length 2,145 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-208ENST00000496116 MED30Q96HR3 178 aa9.9□□□□□ -0.82
CMSS1-208ENST00000496116 ZNF436Q9C0F3 470 aaPredicted RBP9.9□□□□□ -0.82
CMSS1-208ENST00000496116 ATG5Q9H1Y0 275 aa9.9□□□□□ -0.82
CMSS1-208ENST00000496116 GAREM1Q9H706 876 aa9.9□□□□□ -0.82
CMSS1-208ENST00000496116 PTGES2Q9H7Z7 377 aa9.9□□□□□ -0.82
CMSS1-208ENST00000496116 WDR54Q9H977 334 aa9.9□□□□□ -0.82
CMSS1-208ENST00000496116 G6PC2Q9NQR9 355 aa9.9□□□□□ -0.82
CMSS1-208ENST00000496116 PRMT8Q9NR22 394 aaPredicted RBP9.9□□□□□ -0.82
CMSS1-208ENST00000496116 TAS2R4Q9NYW5 299 aa9.9□□□□□ -0.82
CMSS1-208ENST00000496116 GPN3Q9UHW5 284 aaPredicted RBP9.9□□□□□ -0.82
CMSS1-208ENST00000496116 TRAV18A0A075B6X5 111 aa9.89□□□□□ -0.83
CMSS1-208ENST00000496116 TMEM272A0A1B0GTI8 110 aa9.89□□□□□ -0.83
CMSS1-208ENST00000496116 LOC107986453A0A1B0GWG9 222 aa9.89□□□□□ -0.83
CMSS1-208ENST00000496116 A0A1W2PPC1 479 aa9.89□□□□□ -0.83
CMSS1-208ENST00000496116 CIB4A0PJX0 185 aa9.89□□□□□ -0.83
CMSS1-208ENST00000496116 SHISA8B8ZZ34 492 aa9.89□□□□□ -0.83
CMSS1-208ENST00000496116 TP53I11O14683 189 aa9.89□□□□□ -0.83
CMSS1-208ENST00000496116 CREBL2O60519 120 aaPredicted RBP9.89□□□□□ -0.83
CMSS1-208ENST00000496116 ICMTO60725 284 aa9.89□□□□□ -0.83
CMSS1-208ENST00000496116 ALX3O95076 343 aa9.89□□□□□ -0.83
CMSS1-208ENST00000496116 ALDOBP05062 364 aa9.89□□□□□ -0.83
CMSS1-208ENST00000496116 DNASE1P24855 282 aa9.89□□□□□ -0.83
CMSS1-208ENST00000496116 FKBP2P26885 142 aaKnown RBP9.89□□□□□ -0.83
CMSS1-208ENST00000496116 HTR2BP41595 481 aa9.89□□□□□ -0.83
CMSS1-208ENST00000496116 MMP16P51512 607 aa9.89□□□□□ -0.83
CMSS1-208ENST00000496116 EFNB2P52799 333 aa9.89□□□□□ -0.83
CMSS1-208ENST00000496116 RBMS2Q15434 407 aaKnown RBP9.89□□□□□ -0.83
CMSS1-208ENST00000496116 CLPPQ16740 277 aaPredicted RBP9.89□□□□□ -0.83
CMSS1-208ENST00000496116 ASPHD2Q6ICH7 369 aa9.89□□□□□ -0.83
CMSS1-208ENST00000496116 FAAP20Q6NZ36 180 aa9.89□□□□□ -0.83
CMSS1-208ENST00000496116 WDR5BQ86VZ2 330 aa9.89□□□□□ -0.83
CMSS1-208ENST00000496116 RNF133Q8WVZ7 376 aa9.89□□□□□ -0.83
CMSS1-208ENST00000496116 SNAPC3Q92966 411 aa9.89□□□□□ -0.83
CMSS1-208ENST00000496116 FOXRED1Q96CU9 486 aaPredicted RBP9.89□□□□□ -0.83
CMSS1-208ENST00000496116 RASL10BQ96S79 203 aa9.89□□□□□ -0.83
CMSS1-208ENST00000496116 UTP23Q9BRU9 249 aaKnown RBP9.89□□□□□ -0.83
CMSS1-208ENST00000496116 FSCN3Q9NQT6 498 aa9.89□□□□□ -0.83
CMSS1-208ENST00000496116 DLL4Q9NR61 685 aa9.89□□□□□ -0.83
CMSS1-208ENST00000496116 CENPMQ9NSP4 180 aa9.89□□□□□ -0.83
CMSS1-208ENST00000496116 OCIAD1Q9NX40 245 aa9.89□□□□□ -0.83
CMSS1-208ENST00000496116 NPTNQ9Y639 398 aa9.89□□□□□ -0.83
CMSS1-208ENST00000496116 TNRC6BQ9UPQ9 1833 aaKnown RBP9.89□□□□□ -0.83
CMSS1-208ENST00000496116 IGKV1D-43A0A0B4J1Z2 117 aa9.89□□□□□ -0.83
CMSS1-208ENST00000496116 EFNA2O43921 213 aa9.89□□□□□ -0.83
CMSS1-208ENST00000496116 TSC22D2O75157 780 aa9.89□□□□□ -0.83
CMSS1-208ENST00000496116 IGHG1P01857 330 aa9.89□□□□□ -0.83
CMSS1-208ENST00000496116 IL5P05113 134 aa9.89□□□□□ -0.83
CMSS1-208ENST00000496116 CFIP05156 583 aa9.89□□□□□ -0.83
CMSS1-208ENST00000496116 KLK3P07288 261 aaPredicted RBP9.89□□□□□ -0.83
CMSS1-208ENST00000496116 SDHBP21912 280 aa9.89□□□□□ -0.83
CMSS1-208ENST00000496116 ADH6P28332 368 aa9.89□□□□□ -0.83
CMSS1-208ENST00000496116 EIF1P41567 113 aaKnown RBP9.89□□□□□ -0.83
CMSS1-208ENST00000496116 MECP2P51608 486 aaKnown RBP9.89□□□□□ -0.83
CMSS1-208ENST00000496116 CLRN1P58418 232 aa9.89□□□□□ -0.83
CMSS1-208ENST00000496116 ACTBP60709 375 aa9.89□□□□□ -0.83
CMSS1-208ENST00000496116 ACTG1P63261 375 aa9.89□□□□□ -0.83
CMSS1-208ENST00000496116 GALK2Q01415 458 aa9.89□□□□□ -0.83
CMSS1-208ENST00000496116 CAMK2DQ13557 499 aa9.89□□□□□ -0.83
CMSS1-208ENST00000496116 GLYATL3Q5SZD4 288 aa9.89□□□□□ -0.83
CMSS1-208ENST00000496116 LCN10Q6JVE6 187 aa9.89□□□□□ -0.83
CMSS1-208ENST00000496116 OR4K17Q8NGC6 315 aa9.89□□□□□ -0.83
CMSS1-208ENST00000496116 POC1BQ8TC44 478 aa9.89□□□□□ -0.83
CMSS1-208ENST00000496116 ELP5Q8TE02 316 aa9.89□□□□□ -0.83
CMSS1-208ENST00000496116 SLC25A43Q8WUT9 341 aaPredicted RBP9.89□□□□□ -0.83
CMSS1-208ENST00000496116 MS4A3Q96HJ5 214 aa9.89□□□□□ -0.83
CMSS1-208ENST00000496116 GPR137Q96N19 417 aa9.89□□□□□ -0.83
CMSS1-208ENST00000496116 EMC6Q9BV81 110 aa9.89□□□□□ -0.83
CMSS1-208ENST00000496116 C1orf198Q9H425 327 aa9.89□□□□□ -0.83
CMSS1-208ENST00000496116 B3GAT1Q9P2W7 334 aa9.89□□□□□ -0.83
CMSS1-208ENST00000496116 SNRPGP15A8MWD9 76 aa9.88□□□□□ -0.83
CMSS1-208ENST00000496116 SULT1C2O00338 296 aa9.88□□□□□ -0.83
CMSS1-208ENST00000496116 AKAIN1P0CW23 69 aa9.88□□□□□ -0.83
CMSS1-208ENST00000496116 LAP3P28838 519 aa9.88□□□□□ -0.83
CMSS1-208ENST00000496116 SNTA1Q13424 505 aa9.88□□□□□ -0.83
CMSS1-208ENST00000496116 ADGRE4PQ86SQ3 457 aa9.88□□□□□ -0.83
CMSS1-208ENST00000496116 JAGN1Q8N5M9 183 aa9.88□□□□□ -0.83
CMSS1-208ENST00000496116 OR2M3Q8NG83 312 aa9.88□□□□□ -0.83
CMSS1-208ENST00000496116 OR4C16Q8NGL9 310 aa9.88□□□□□ -0.83
CMSS1-208ENST00000496116 C11orf40Q8WZ69 217 aa9.88□□□□□ -0.83
CMSS1-208ENST00000496116 SLC25A28Q96A46 364 aa9.88□□□□□ -0.83
CMSS1-208ENST00000496116 SLAMF6Q96DU3 332 aa9.88□□□□□ -0.83
CMSS1-208ENST00000496116 OR5B2Q96R09 309 aa9.88□□□□□ -0.83
CMSS1-208ENST00000496116 CDX2Q99626 313 aaPredicted RBP9.88□□□□□ -0.83
CMSS1-208ENST00000496116 MRPL13Q9BYD1 178 aaKnown RBP9.88□□□□□ -0.83
CMSS1-208ENST00000496116 METTL17Q9H7H0 456 aaPredicted RBP9.88□□□□□ -0.83
CMSS1-208ENST00000496116 NPDC1Q9NQX5 325 aaPredicted RBP9.88□□□□□ -0.83
CMSS1-208ENST00000496116 KLHL13Q9P2N7 655 aa9.88□□□□□ -0.83
CMSS1-208ENST00000496116 ZNF69Q9UC07 566 aa9.88□□□□□ -0.83
CMSS1-208ENST00000496116 CYB5R1Q9UHQ9 305 aa9.88□□□□□ -0.83
CMSS1-208ENST00000496116 B3GALT1Q9Y5Z6 326 aa9.88□□□□□ -0.83
CMSS1-208ENST00000496116 TRIOBPQ9H2D6 2365 aa9.88□□□□□ -0.83
CMSS1-208ENST00000496116 A0A0A6YYH2 397 aa9.88□□□□□ -0.83
CMSS1-208ENST00000496116 DCDC2BA2VCK2 349 aa9.88□□□□□ -0.83
CMSS1-208ENST00000496116 A6NJ64 397 aa9.88□□□□□ -0.83
CMSS1-208ENST00000496116 EIF1AYO14602 144 aaKnown RBP9.88□□□□□ -0.83
CMSS1-208ENST00000496116 KDM4BO94953 1096 aa9.88□□□□□ -0.83
CMSS1-208ENST00000496116 CD37P11049 281 aa9.88□□□□□ -0.83
CMSS1-208ENST00000496116 GTF2F2P13984 249 aa9.88□□□□□ -0.83
CMSS1-208ENST00000496116 RAD52P43351 418 aa9.88□□□□□ -0.83
CMSS1-208ENST00000496116 DUSP3P51452 185 aaPredicted RBP9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms