RNA–Protein interactions for RNA: ENST00000496024.1

CALD1-223, Transcript of caldesmon 1, humanhuman

TSL 4

Gene CALD1, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-223ENST00000496024 DDOQ99489 341 aa8.48□□□□□ -1.05
CALD1-223ENST00000496024 PKP2Q99959 881 aa8.48□□□□□ -1.05
CALD1-223ENST00000496024 VRK1Q99986 396 aaPredicted RBP8.48□□□□□ -1.05
CALD1-223ENST00000496024 SYT3Q9BQG1 590 aa8.48□□□□□ -1.05
CALD1-223ENST00000496024 GSX2Q9BZM3 304 aa8.48□□□□□ -1.05
CALD1-223ENST00000496024 RACGAP1Q9H0H5 632 aa8.48□□□□□ -1.05
CALD1-223ENST00000496024 CXXC4Q9H2H0 198 aa8.48□□□□□ -1.05
CALD1-223ENST00000496024 C1orf198Q9H425 327 aa8.48□□□□□ -1.05
CALD1-223ENST00000496024 PAPOLBQ9NRJ5 636 aaKnown RBP8.48□□□□□ -1.05
CALD1-223ENST00000496024 KRT84Q9NSB2 600 aa8.48□□□□□ -1.05
CALD1-223ENST00000496024 PLEK2Q9NYT0 353 aa8.48□□□□□ -1.05
CALD1-223ENST00000496024 CMAHPQ9Y471 501 aa8.48□□□□□ -1.05
CALD1-223ENST00000496024 ZNF469Q96JG9 3925 aaPredicted RBP8.48□□□□□ -1.05
CALD1-223ENST00000496024 B9A039 149 aa8.47□□□□□ -1.05
CALD1-223ENST00000496024 HAX1O00165 279 aa8.47□□□□□ -1.05
CALD1-223ENST00000496024 RER1O15258 196 aa8.47□□□□□ -1.05
CALD1-223ENST00000496024 ZNF3P17036 446 aa8.47□□□□□ -1.05
CALD1-223ENST00000496024 GRK5P34947 590 aa8.47□□□□□ -1.05
CALD1-223ENST00000496024 GLRXP35754 106 aa8.47□□□□□ -1.05
CALD1-223ENST00000496024 RPS27P42677 84 aaKnown RBP8.47□□□□□ -1.05
CALD1-223ENST00000496024 LSM6P62312 80 aaKnown RBP8.47□□□□□ -1.05
CALD1-223ENST00000496024 SCRN3Q0VDG4 424 aa8.47□□□□□ -1.05
CALD1-223ENST00000496024 RAB35Q15286 201 aa8.47□□□□□ -1.05
CALD1-223ENST00000496024 MSMPQ1L6U9 139 aa8.47□□□□□ -1.05
CALD1-223ENST00000496024 MST1LQ2TV78 715 aa8.47□□□□□ -1.05
CALD1-223ENST00000496024 FAHD1Q6P587 224 aa8.47□□□□□ -1.05
CALD1-223ENST00000496024 SYT9Q86SS6 491 aa8.47□□□□□ -1.05
CALD1-223ENST00000496024 ZBTB46Q86UZ6 589 aa8.47□□□□□ -1.05
CALD1-223ENST00000496024 LRP11Q86VZ4 500 aa8.47□□□□□ -1.05
CALD1-223ENST00000496024 LRRC75A-AS1Q8N1F1 130 aa8.47□□□□□ -1.05
CALD1-223ENST00000496024 ZNF511Q8NB15 262 aa8.47□□□□□ -1.05
CALD1-223ENST00000496024 SLC26A10Q8NG04 563 aa8.47□□□□□ -1.05
CALD1-223ENST00000496024 OR6K6Q8NGW6 343 aa8.47□□□□□ -1.05
CALD1-223ENST00000496024 OR2T4Q8NH00 348 aa8.47□□□□□ -1.05
CALD1-223ENST00000496024 CENPNQ96H22 339 aaPredicted RBP8.47□□□□□ -1.05
CALD1-223ENST00000496024 POM121L2Q96KW2 1035 aa8.47□□□□□ -1.05
CALD1-223ENST00000496024 RBM4Q9BWF3 364 aaKnown RBP8.47□□□□□ -1.05
CALD1-223ENST00000496024 CDADC1Q9BWV3 514 aa8.47□□□□□ -1.05
CALD1-223ENST00000496024 MRPL37Q9BZE1 423 aaKnown RBP8.47□□□□□ -1.05
CALD1-223ENST00000496024 PLK3Q9H4B4 646 aa8.47□□□□□ -1.05
CALD1-223ENST00000496024 ZNF442Q9H7R0 627 aa8.47□□□□□ -1.05
CALD1-223ENST00000496024 CMC2Q9NRP2 79 aa8.47□□□□□ -1.05
CALD1-223ENST00000496024 ZNF701Q9NV72 531 aaPredicted RBP8.47□□□□□ -1.05
CALD1-223ENST00000496024 EIF3KQ9UBQ5 218 aaKnown RBP8.47□□□□□ -1.05
CALD1-223ENST00000496024 DUSP13Q9UII6 198 aa8.47□□□□□ -1.05
CALD1-223ENST00000496024 OAZ3Q9UMX2 235 aa8.47□□□□□ -1.05
CALD1-223ENST00000496024 LHFPL6Q9Y693 200 aa8.47□□□□□ -1.05
CALD1-223ENST00000496024 PMF1-BGLAPU3KQ54 211 aa8.47□□□□□ -1.05
CALD1-223ENST00000496024 TMEM129A0AVI4 362 aa8.46□□□□□ -1.06
CALD1-223ENST00000496024 ANKRD65E5RJM6 399 aa8.46□□□□□ -1.06
CALD1-223ENST00000496024 H3BNX3 289 aa8.46□□□□□ -1.06
CALD1-223ENST00000496024 SSX4O60224 188 aa8.46□□□□□ -1.06
CALD1-223ENST00000496024 TMCC2O75069 709 aa8.46□□□□□ -1.06
CALD1-223ENST00000496024 LY6HO94772 140 aa8.46□□□□□ -1.06
CALD1-223ENST00000496024 SNAP29O95721 258 aa8.46□□□□□ -1.06
CALD1-223ENST00000496024 IGHV4-39P01824 125 aa8.46□□□□□ -1.06
CALD1-223ENST00000496024 BMP4P12644 408 aa8.46□□□□□ -1.06
CALD1-223ENST00000496024 ZNF823P16415 610 aa8.46□□□□□ -1.06
CALD1-223ENST00000496024 SPI1P17947 270 aa8.46□□□□□ -1.06
CALD1-223ENST00000496024 WNT5AP41221 380 aa8.46□□□□□ -1.06
CALD1-223ENST00000496024 CRISP1P54107 249 aa8.46□□□□□ -1.06
CALD1-223ENST00000496024 UCP2P55851 309 aa8.46□□□□□ -1.06
CALD1-223ENST00000496024 ERVS71-1P61550 626 aa8.46□□□□□ -1.06
CALD1-223ENST00000496024 RPS23P62266 143 aaKnown RBP8.46□□□□□ -1.06
CALD1-223ENST00000496024 KCNMB1Q16558 191 aa8.46□□□□□ -1.06
CALD1-223ENST00000496024 SWI5Q1ZZU3 235 aa8.46□□□□□ -1.06
CALD1-223ENST00000496024 ALKBH6Q3KRA9 238 aa8.46□□□□□ -1.06
CALD1-223ENST00000496024 CCDC92Q53HC0 331 aaPredicted RBP8.46□□□□□ -1.06
CALD1-223ENST00000496024 SPATA46Q5T0L3 261 aa8.46□□□□□ -1.06
CALD1-223ENST00000496024 SHEQ5VZ18 495 aa8.46□□□□□ -1.06
CALD1-223ENST00000496024 RGS7BPQ6MZT1 257 aaPredicted RBP8.46□□□□□ -1.06
CALD1-223ENST00000496024 ZFP1Q6P2D0 407 aa8.46□□□□□ -1.06
CALD1-223ENST00000496024 PLBD1Q6P4A8 553 aa8.46□□□□□ -1.06
CALD1-223ENST00000496024 SPNS3Q6ZMD2 512 aa8.46□□□□□ -1.06
CALD1-223ENST00000496024 VASH1Q7L8A9 365 aaPredicted RBP8.46□□□□□ -1.06
CALD1-223ENST00000496024 TGIF2LYQ8IUE0 185 aa8.46□□□□□ -1.06
CALD1-223ENST00000496024 KRTAP1-3Q8IUG1 177 aa8.46□□□□□ -1.06
CALD1-223ENST00000496024 ZNF101Q8IZC7 436 aa8.46□□□□□ -1.06
CALD1-223ENST00000496024 ZCCHC24Q8N2G6 241 aaKnown RBP8.46□□□□□ -1.06
CALD1-223ENST00000496024 OR1J1Q8NGS3 322 aa8.46□□□□□ -1.06
CALD1-223ENST00000496024 OR2AJ1Q8NGZ0 328 aa8.46□□□□□ -1.06
CALD1-223ENST00000496024 MRPL24Q96A35 216 aaKnown RBP8.46□□□□□ -1.06
CALD1-223ENST00000496024 PLEKHA8Q96JA3 519 aa8.46□□□□□ -1.06
CALD1-223ENST00000496024 Q96MF0 132 aa8.46□□□□□ -1.06
CALD1-223ENST00000496024 HCAR1Q9BXC0 346 aa8.46□□□□□ -1.06
CALD1-223ENST00000496024 GRIP2Q9C0E4 1043 aa8.46□□□□□ -1.06
CALD1-223ENST00000496024 OR51V1Q9H2C8 321 aa8.46□□□□□ -1.06
CALD1-223ENST00000496024 DYNLRB1Q9NP97 96 aa8.46□□□□□ -1.06
CALD1-223ENST00000496024 MRPL22Q9NWU5 206 aaKnown RBP8.46□□□□□ -1.06
CALD1-223ENST00000496024 TVP23BQ9NYZ1 205 aa8.46□□□□□ -1.06
CALD1-223ENST00000496024 MYEF2Q9P2K5 600 aaKnown RBP8.46□□□□□ -1.06
CALD1-223ENST00000496024 GRIP1Q9Y3R0 1128 aa8.46□□□□□ -1.06
CALD1-223ENST00000496024 A0A1W2PPW3 197 aa8.45□□□□□ -1.06
CALD1-223ENST00000496024 PRR23D1E9PI22 279 aaPredicted RBP8.45□□□□□ -1.06
CALD1-223ENST00000496024 M0R129 80 aa8.45□□□□□ -1.06
CALD1-223ENST00000496024 SURF4O15260 269 aa8.45□□□□□ -1.06
CALD1-223ENST00000496024 SYNGR3O43761 229 aa8.45□□□□□ -1.06
CALD1-223ENST00000496024 ABHD16AO95870 558 aa8.45□□□□□ -1.06
CALD1-223ENST00000496024 CLPTM1O96005 669 aa8.45□□□□□ -1.06
CALD1-223ENST00000496024 HMGN1P05114 100 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms