RNA–Protein interactions for RNA: ENST00000495981.5

VPS52-222, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 1 (best)

Gene VPS52, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-222ENST00000495981 OPN1LWP04000 364 aa3.64□□□□□ -1.83
VPS52-222ENST00000495981 ANXA4P09525 319 aaPredicted RBP3.64□□□□□ -1.83
VPS52-222ENST00000495981 IGHV4-31P0DP07 118 aa3.64□□□□□ -1.83
VPS52-222ENST00000495981 MYOD1P15172 320 aa3.64□□□□□ -1.83
VPS52-222ENST00000495981 IGHV1-2P23083 117 aa3.64□□□□□ -1.83
VPS52-222ENST00000495981 PAX7P23759 505 aa3.64□□□□□ -1.83
VPS52-222ENST00000495981 HMOX2P30519 316 aa3.64□□□□□ -1.83
VPS52-222ENST00000495981 GABRA3P34903 492 aa3.64□□□□□ -1.83
VPS52-222ENST00000495981 MPIP34949 423 aa3.64□□□□□ -1.83
VPS52-222ENST00000495981 PHBP35232 272 aa3.64□□□□□ -1.83
VPS52-222ENST00000495981 SFTPDP35247 375 aa3.64□□□□□ -1.83
VPS52-222ENST00000495981 ACAA2P42765 397 aaKnown RBP3.64□□□□□ -1.83
VPS52-222ENST00000495981 NKX2-1P43699 371 aaPredicted RBP3.64□□□□□ -1.83
VPS52-222ENST00000495981 OR3A2P47893 321 aa3.64□□□□□ -1.83
VPS52-222ENST00000495981 RFX3P48380 749 aa3.64□□□□□ -1.83
VPS52-222ENST00000495981 MMP15P51511 669 aa3.64□□□□□ -1.83
VPS52-222ENST00000495981 CDH11P55287 796 aa3.64□□□□□ -1.83
VPS52-222ENST00000495981 PKNOX1P55347 436 aa3.64□□□□□ -1.83
VPS52-222ENST00000495981 CTBP2P56545 445 aa3.64□□□□□ -1.83
VPS52-222ENST00000495981 ZNF415Q09FC8 603 aa3.64□□□□□ -1.83
VPS52-222ENST00000495981 SELENBP1Q13228 472 aa3.64□□□□□ -1.83
VPS52-222ENST00000495981 TOMM34Q15785 309 aaPredicted RBP3.64□□□□□ -1.83
VPS52-222ENST00000495981 UGT3A2Q3SY77 523 aa3.64□□□□□ -1.83
VPS52-222ENST00000495981 SLC25A53Q5H9E4 307 aa3.64□□□□□ -1.83
VPS52-222ENST00000495981 CCNJQ5T5M9 372 aa3.64□□□□□ -1.83
VPS52-222ENST00000495981 HBMQ6B0K9 141 aa3.64□□□□□ -1.83
VPS52-222ENST00000495981 TYW3Q6IPR3 259 aaKnown RBP3.64□□□□□ -1.83
VPS52-222ENST00000495981 C8orf74Q6P047 294 aa3.64□□□□□ -1.83
VPS52-222ENST00000495981 CBLN3Q6UW01 205 aa3.64□□□□□ -1.83
VPS52-222ENST00000495981 ZYG11AQ6WRX3 759 aa3.64□□□□□ -1.83
VPS52-222ENST00000495981 TIFABQ6ZNK6 161 aa3.64□□□□□ -1.83
VPS52-222ENST00000495981 RNF165Q6ZSG1 346 aa3.64□□□□□ -1.83
VPS52-222ENST00000495981 Q6ZT83 130 aa3.64□□□□□ -1.83
VPS52-222ENST00000495981 CHMP1BQ7LBR1 199 aa3.64□□□□□ -1.83
VPS52-222ENST00000495981 LCA5Q86VQ0 697 aa3.64□□□□□ -1.83
VPS52-222ENST00000495981 GLCCI1Q86VQ1 547 aa3.64□□□□□ -1.83
VPS52-222ENST00000495981 MISPQ8IVT2 679 aa3.64□□□□□ -1.83
VPS52-222ENST00000495981 ZNF525Q8N782 197 aa3.64□□□□□ -1.83
VPS52-222ENST00000495981 C3orf56Q8N813 242 aa3.64□□□□□ -1.83
VPS52-222ENST00000495981 SLC16A11Q8NCK7 471 aa3.64□□□□□ -1.83
VPS52-222ENST00000495981 FAM71CQ8NEG0 241 aa3.64□□□□□ -1.83
VPS52-222ENST00000495981 STEAP2Q8NFT2 490 aa3.64□□□□□ -1.83
VPS52-222ENST00000495981 CDC26Q8NHZ8 85 aa3.64□□□□□ -1.83
VPS52-222ENST00000495981 FAM76AQ8TAV0 307 aa3.64□□□□□ -1.83
VPS52-222ENST00000495981 ZFP90Q8TF47 636 aa3.64□□□□□ -1.83
VPS52-222ENST00000495981 SMAP2Q8WU79 429 aaPredicted RBP3.64□□□□□ -1.83
VPS52-222ENST00000495981 CPNE4Q96A23 557 aaPredicted RBP3.64□□□□□ -1.83
VPS52-222ENST00000495981 MTERF3Q96E29 417 aa3.64□□□□□ -1.83
VPS52-222ENST00000495981 SH3YL1Q96HL8 342 aaPredicted RBP3.64□□□□□ -1.83
VPS52-222ENST00000495981 FMO2Q99518 471 aa3.64□□□□□ -1.83
VPS52-222ENST00000495981 SHARPINQ9H0F6 387 aa3.64□□□□□ -1.83
VPS52-222ENST00000495981 TUBB1Q9H4B7 451 aa3.64□□□□□ -1.83
VPS52-222ENST00000495981 ZNF696Q9H7X3 374 aa3.64□□□□□ -1.83
VPS52-222ENST00000495981 SDHAF3Q9NRP4 125 aa3.64□□□□□ -1.83
VPS52-222ENST00000495981 GLRX2Q9NS18 164 aa3.64□□□□□ -1.83
VPS52-222ENST00000495981 NMRK1Q9NWW6 199 aa3.64□□□□□ -1.83
VPS52-222ENST00000495981 MALT1Q9UDY8 824 aa3.64□□□□□ -1.83
VPS52-222ENST00000495981 MCTS1Q9ULC4 181 aaKnown RBP3.64□□□□□ -1.83
VPS52-222ENST00000495981 AURKCQ9UQB9 309 aa3.64□□□□□ -1.83
VPS52-222ENST00000495981 STK38LQ9Y2H1 464 aa3.64□□□□□ -1.83
VPS52-222ENST00000495981 TMED3Q9Y3Q3 217 aa3.64□□□□□ -1.83
VPS52-222ENST00000495981 DNAH7Q8WXX0 4024 aa3.64□□□□□ -1.83
VPS52-222ENST00000495981 LYSTQ99698 3801 aa3.63□□□□□ -1.83
VPS52-222ENST00000495981 IGKV3D-15A0A087WSY6 115 aa3.63□□□□□ -1.83
VPS52-222ENST00000495981 A0A087X0K7 114 aa3.63□□□□□ -1.83
VPS52-222ENST00000495981 IGHV3-15A0A0B4J1V0 119 aa3.63□□□□□ -1.83
VPS52-222ENST00000495981 NPIPA5A0A0B4J1W7 369 aa3.63□□□□□ -1.83
VPS52-222ENST00000495981 A0A0B4J203 849 aa3.63□□□□□ -1.83
VPS52-222ENST00000495981 TRBV2A0A0J9YWF9 115 aa3.63□□□□□ -1.83
VPS52-222ENST00000495981 EXOC1LA0A1B0GW35 172 aa3.63□□□□□ -1.83
VPS52-222ENST00000495981 A0A1W2PP18 115 aa3.63□□□□□ -1.83
VPS52-222ENST00000495981 TMEM89A2RUT3 159 aa3.63□□□□□ -1.83
VPS52-222ENST00000495981 OR5H1A6NKK0 313 aa3.63□□□□□ -1.83
VPS52-222ENST00000495981 ZNF716A6NP11 495 aa3.63□□□□□ -1.83
VPS52-222ENST00000495981 NPIPA7E9PJI5 369 aa3.63□□□□□ -1.83
VPS52-222ENST00000495981 PDLIM1O00151 329 aa3.63□□□□□ -1.83
VPS52-222ENST00000495981 ABCD4O14678 606 aa3.63□□□□□ -1.83
VPS52-222ENST00000495981 LSM1O15116 133 aaKnown RBP3.63□□□□□ -1.83
VPS52-222ENST00000495981 LMX1BO60663 402 aa3.63□□□□□ -1.83
VPS52-222ENST00000495981 CYTIPO60759 359 aa3.63□□□□□ -1.83
VPS52-222ENST00000495981 BCAS1O75363 584 aaPredicted RBP3.63□□□□□ -1.83
VPS52-222ENST00000495981 LYZL6O75951 148 aa3.63□□□□□ -1.83
VPS52-222ENST00000495981 LY6HO94772 140 aa3.63□□□□□ -1.83
VPS52-222ENST00000495981 SYNGR4O95473 234 aa3.63□□□□□ -1.83
VPS52-222ENST00000495981 NPIPA8P0DM63 369 aa3.63□□□□□ -1.83
VPS52-222ENST00000495981 IMPDH1P20839 514 aa3.63□□□□□ -1.83
VPS52-222ENST00000495981 PTNP21246 168 aa3.63□□□□□ -1.83
VPS52-222ENST00000495981 CBLP22681 906 aa3.63□□□□□ -1.83
VPS52-222ENST00000495981 ME2P23368 584 aa3.63□□□□□ -1.83
VPS52-222ENST00000495981 IL32P24001 234 aa3.63□□□□□ -1.83
VPS52-222ENST00000495981 LCN1P31025 176 aa3.63□□□□□ -1.83
VPS52-222ENST00000495981 MAGEA8P43361 318 aa3.63□□□□□ -1.83
VPS52-222ENST00000495981 PSMD4P55036 377 aaKnown RBP3.63□□□□□ -1.83
VPS52-222ENST00000495981 C21orf58P58505 322 aa3.63□□□□□ -1.83
VPS52-222ENST00000495981 RPL38P63173 70 aaKnown RBP3.63□□□□□ -1.83
VPS52-222ENST00000495981 KCNJ10P78508 379 aa3.63□□□□□ -1.83
VPS52-222ENST00000495981 LOXL1Q08397 574 aaPredicted RBP3.63□□□□□ -1.83
VPS52-222ENST00000495981 FUT5Q11128 374 aa3.63□□□□□ -1.83
VPS52-222ENST00000495981 SKP2Q13309 424 aa3.63□□□□□ -1.83
VPS52-222ENST00000495981 PTGR1Q14914 329 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms