RNA–Protein interactions for RNA: ENST00000495688.5

PTPN7-217, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 2,689 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-217ENST00000495688 CD163Q86VB7 1156 aa11.68□□□□□ -0.54
PTPN7-217ENST00000495688 ACBD4Q8NC06 268 aa11.68□□□□□ -0.54
PTPN7-217ENST00000495688 CMBLQ96DG6 245 aa11.68□□□□□ -0.54
PTPN7-217ENST00000495688 WDR13Q9H1Z4 485 aa11.68□□□□□ -0.54
PTPN7-217ENST00000495688 TXNIPQ9H3M7 391 aa11.68□□□□□ -0.54
PTPN7-217ENST00000495688 KLK13Q9UKR3 277 aa11.68□□□□□ -0.54
PTPN7-217ENST00000495688 A8MXK9 166 aa11.67□□□□□ -0.54
PTPN7-217ENST00000495688 SOX1O00570 391 aaPredicted RBP11.67□□□□□ -0.54
PTPN7-217ENST00000495688 TSPAN2O60636 221 aa11.67□□□□□ -0.54
PTPN7-217ENST00000495688 CD2P06729 351 aa11.67□□□□□ -0.54
PTPN7-217ENST00000495688 MPGP29372 298 aa11.67□□□□□ -0.54
PTPN7-217ENST00000495688 ACTBP60709 375 aa11.67□□□□□ -0.54
PTPN7-217ENST00000495688 ACTG1P63261 375 aa11.67□□□□□ -0.54
PTPN7-217ENST00000495688 SLC22A6Q4U2R8 563 aa11.67□□□□□ -0.54
PTPN7-217ENST00000495688 ATPAF1Q5TC12 328 aaPredicted RBP11.67□□□□□ -0.54
PTPN7-217ENST00000495688 C1orf189Q5VU69 101 aa11.67□□□□□ -0.54
PTPN7-217ENST00000495688 C1orf140Q5VVS0 124 aa11.67□□□□□ -0.54
PTPN7-217ENST00000495688 GLT8D1Q68CQ7 371 aa11.67□□□□□ -0.54
PTPN7-217ENST00000495688 SLC51BQ86UW2 128 aa11.67□□□□□ -0.54
PTPN7-217ENST00000495688 C12orf45Q8N5I9 185 aaPredicted RBP11.67□□□□□ -0.54
PTPN7-217ENST00000495688 OR4D6Q8NGJ1 314 aa11.67□□□□□ -0.54
PTPN7-217ENST00000495688 ASB17Q8WXJ9 295 aa11.67□□□□□ -0.54
PTPN7-217ENST00000495688 ST8SIA4Q92187 359 aa11.67□□□□□ -0.54
PTPN7-217ENST00000495688 B3GNT4Q9C0J1 378 aa11.67□□□□□ -0.54
PTPN7-217ENST00000495688 SHARPINQ9H0F6 387 aa11.67□□□□□ -0.54
PTPN7-217ENST00000495688 C12orf10Q9HB07 376 aa11.67□□□□□ -0.54
PTPN7-217ENST00000495688 CKLFQ9UBR5 152 aa11.67□□□□□ -0.54
PTPN7-217ENST00000495688 PFDN2Q9UHV9 154 aa11.67□□□□□ -0.54
PTPN7-217ENST00000495688 MSRAQ9UJ68 235 aa11.67□□□□□ -0.54
PTPN7-217ENST00000495688 IGKV1D-43A0A0B4J1Z2 117 aa11.67□□□□□ -0.54
PTPN7-217ENST00000495688 WIPF3A6NGB9 483 aa11.67□□□□□ -0.54
PTPN7-217ENST00000495688 ALG1L2C9J202 215 aa11.67□□□□□ -0.54
PTPN7-217ENST00000495688 PLPP3O14495 311 aa11.67□□□□□ -0.54
PTPN7-217ENST00000495688 EIF1AYO14602 144 aaKnown RBP11.67□□□□□ -0.54
PTPN7-217ENST00000495688 NPIPB7O75200 414 aa11.67□□□□□ -0.54
PTPN7-217ENST00000495688 ZNF735P0CB33 412 aa11.67□□□□□ -0.54
PTPN7-217ENST00000495688 IGFBP3P17936 291 aaPredicted RBP11.67□□□□□ -0.54
PTPN7-217ENST00000495688 PGCP20142 388 aa11.67□□□□□ -0.54
PTPN7-217ENST00000495688 CALCRP30988 508 aa11.67□□□□□ -0.54
PTPN7-217ENST00000495688 TAS2R19P59542 299 aa11.67□□□□□ -0.54
PTPN7-217ENST00000495688 GMFBP60983 142 aa11.67□□□□□ -0.54
PTPN7-217ENST00000495688 BEX5Q5H9J7 111 aa11.67□□□□□ -0.54
PTPN7-217ENST00000495688 HLA-DQA1Q5Y7H0 255 aa11.67□□□□□ -0.54
PTPN7-217ENST00000495688 LIN54Q6MZP7 749 aa11.67□□□□□ -0.54
PTPN7-217ENST00000495688 KCTD18Q6PI47 426 aaPredicted RBP11.67□□□□□ -0.54
PTPN7-217ENST00000495688 RTN4RL2Q86UN3 420 aa11.67□□□□□ -0.54
PTPN7-217ENST00000495688 ZNF454Q8N9F8 522 aa11.67□□□□□ -0.54
PTPN7-217ENST00000495688 STEAP2Q8NFT2 490 aa11.67□□□□□ -0.54
PTPN7-217ENST00000495688 OR5M9Q8NGP3 310 aa11.67□□□□□ -0.54
PTPN7-217ENST00000495688 OR13C3Q8NGS6 347 aa11.67□□□□□ -0.54
PTPN7-217ENST00000495688 OR52N5Q8NH56 324 aa11.67□□□□□ -0.54
PTPN7-217ENST00000495688 SEC22AQ96IW7 307 aa11.67□□□□□ -0.54
PTPN7-217ENST00000495688 SLC6A7Q99884 636 aa11.67□□□□□ -0.54
PTPN7-217ENST00000495688 C1orf198Q9H425 327 aa11.67□□□□□ -0.54
PTPN7-217ENST00000495688 VSX1Q9NZR4 365 aaPredicted RBP11.67□□□□□ -0.54
PTPN7-217ENST00000495688 LOC107986453A0A1B0GWG9 222 aa11.66□□□□□ -0.54
PTPN7-217ENST00000495688 TLCD2A6NGC4 264 aa11.66□□□□□ -0.54
PTPN7-217ENST00000495688 HSPB2A8KAH6 182 aa11.66□□□□□ -0.54
PTPN7-217ENST00000495688 H3BMH7 237 aa11.66□□□□□ -0.54
PTPN7-217ENST00000495688 H3BUI4 141 aa11.66□□□□□ -0.54
PTPN7-217ENST00000495688 DXOO77932 396 aaKnown RBP11.66□□□□□ -0.54
PTPN7-217ENST00000495688 CYB5AP00167 134 aa11.66□□□□□ -0.54
PTPN7-217ENST00000495688 FGF2P09038 288 aa11.66□□□□□ -0.54
PTPN7-217ENST00000495688 PMPCAQ10713 525 aa11.66□□□□□ -0.54
PTPN7-217ENST00000495688 DHRS2Q13268 280 aa11.66□□□□□ -0.54
PTPN7-217ENST00000495688 ZMYND11Q15326 602 aa11.66□□□□□ -0.54
PTPN7-217ENST00000495688 HSPB2Q16082 182 aa11.66□□□□□ -0.54
PTPN7-217ENST00000495688 NUP54Q7Z3B4 507 aa11.66□□□□□ -0.54
PTPN7-217ENST00000495688 DCXRQ7Z4W1 244 aa11.66□□□□□ -0.54
PTPN7-217ENST00000495688 ZNF546Q86UE3 836 aa11.66□□□□□ -0.54
PTPN7-217ENST00000495688 NAXDQ8IW45 347 aa11.66□□□□□ -0.54
PTPN7-217ENST00000495688 CDH26Q8IXH8 852 aa11.66□□□□□ -0.54
PTPN7-217ENST00000495688 BVESQ8NE79 360 aa11.66□□□□□ -0.54
PTPN7-217ENST00000495688 OR13C8Q8NGS7 320 aa11.66□□□□□ -0.54
PTPN7-217ENST00000495688 POTEKPQ9BYX7 375 aa11.66□□□□□ -0.54
PTPN7-217ENST00000495688 WWTR1Q9GZV5 400 aa11.66□□□□□ -0.54
PTPN7-217ENST00000495688 DUSP15Q9H1R2 295 aaPredicted RBP11.66□□□□□ -0.54
PTPN7-217ENST00000495688 MRTO4Q9UKD2 239 aaKnown RBP11.66□□□□□ -0.54
PTPN7-217ENST00000495688 IGHV3-20A0A0C4DH32 117 aa11.66□□□□□ -0.54
PTPN7-217ENST00000495688 PMS2P2O95744 297 aa11.66□□□□□ -0.54
PTPN7-217ENST00000495688 GLO1Q04760 184 aa11.66□□□□□ -0.54
PTPN7-217ENST00000495688 UBXN2BQ14CS0 331 aa11.66□□□□□ -0.54
PTPN7-217ENST00000495688 ATXN7L3Q14CW9 347 aaPredicted RBP11.66□□□□□ -0.54
PTPN7-217ENST00000495688 ELAVL1Q15717 326 aaKnown RBP11.66□□□□□ -0.54
PTPN7-217ENST00000495688 LANCL3Q6ZV70 420 aa11.66□□□□□ -0.54
PTPN7-217ENST00000495688 PDZD9Q8IXQ8 264 aa11.66□□□□□ -0.54
PTPN7-217ENST00000495688 BEST3Q8N1M1 668 aa11.66□□□□□ -0.54
PTPN7-217ENST00000495688 BPIFB2Q8N4F0 458 aa11.66□□□□□ -0.54
PTPN7-217ENST00000495688 GVQW1Q8N7I0 195 aa11.66□□□□□ -0.54
PTPN7-217ENST00000495688 FAM46BQ96A09 425 aa11.66□□□□□ -0.54
PTPN7-217ENST00000495688 ARL5BQ96KC2 179 aa11.66□□□□□ -0.54
PTPN7-217ENST00000495688 SLC17A5Q9NRA2 495 aa11.66□□□□□ -0.54
PTPN7-217ENST00000495688 SESN1Q9Y6P5 492 aa11.66□□□□□ -0.54
PTPN7-217ENST00000495688 ARID1AO14497 2285 aa11.65□□□□□ -0.54
PTPN7-217ENST00000495688 RFPL4AA6NLU0 287 aa11.65□□□□□ -0.54
PTPN7-217ENST00000495688 ZNF736B4DX44 427 aaPredicted RBP11.65□□□□□ -0.54
PTPN7-217ENST00000495688 RFPL4AL1F8VTS6 287 aa11.65□□□□□ -0.54
PTPN7-217ENST00000495688 P2RY10O00398 339 aa11.65□□□□□ -0.54
PTPN7-217ENST00000495688 SRSF10O75494 262 aaKnown RBP11.65□□□□□ -0.54
PTPN7-217ENST00000495688 MT-ATP6P00846 226 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms