RNA–Protein interactions for RNA: ENST00000495522.1

CALD1-222, Transcript of caldesmon 1, human

TSL 5 BASIC

Gene CALD1, Length 2,199 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CALD1-222	ENST00000495522	SELENOP	P49908	381 aa		13.72	□□□□□ -0.21
CALD1-222	ENST00000495522	PER3	P56645	1201 aa		13.72	□□□□□ -0.21
CALD1-222	ENST00000495522	ZBTB37	Q5TC79	503 aa		13.72	□□□□□ -0.21
CALD1-222	ENST00000495522	ZNF385C	Q66K41	422 aa	Predicted RBP	13.72	□□□□□ -0.21
CALD1-222	ENST00000495522	DEGS2	Q6QHC5	323 aa		13.72	□□□□□ -0.21
CALD1-222	ENST00000495522	LINC00346	Q8IVM7	164 aa		13.72	□□□□□ -0.21
CALD1-222	ENST00000495522	WDFY1	Q8IWB7	410 aa		13.72	□□□□□ -0.21
CALD1-222	ENST00000495522	CCDC28A	Q8IWP9	274 aa		13.72	□□□□□ -0.21
CALD1-222	ENST00000495522	OR13C3	Q8NGS6	347 aa		13.72	□□□□□ -0.21
CALD1-222	ENST00000495522	OR2T35	Q8NGX2	323 aa		13.72	□□□□□ -0.21
CALD1-222	ENST00000495522	SLC25A44	Q96H78	314 aa	Predicted RBP	13.72	□□□□□ -0.21
CALD1-222	ENST00000495522	MRGPRX4	Q96LA9	322 aa		13.72	□□□□□ -0.21
CALD1-222	ENST00000495522	CMKLR1	Q99788	373 aa		13.72	□□□□□ -0.21
CALD1-222	ENST00000495522	SEC22C	Q9BRL7	303 aa		13.72	□□□□□ -0.21
CALD1-222	ENST00000495522	KCNK15	Q9H427	330 aa		13.72	□□□□□ -0.21
CALD1-222	ENST00000495522	G6PC2	Q9NQR9	355 aa		13.72	□□□□□ -0.21
CALD1-222	ENST00000495522	PRMT8	Q9NR22	394 aa	Predicted RBP	13.72	□□□□□ -0.21
CALD1-222	ENST00000495522	PCDHGA5	Q9Y5G8	931 aa		13.72	□□□□□ -0.21
CALD1-222	ENST00000495522	ADAMTS9	Q9P2N4	1935 aa		13.72	□□□□□ -0.21
CALD1-222	ENST00000495522	LOC107986453	A0A1B0GWG9	222 aa		13.72	□□□□□ -0.21
CALD1-222	ENST00000495522	SHISA8	B8ZZ34	492 aa		13.72	□□□□□ -0.21
CALD1-222	ENST00000495522	SIGLEC6	O43699	453 aa		13.72	□□□□□ -0.21
CALD1-222	ENST00000495522	HRG	P04196	525 aa		13.72	□□□□□ -0.21
CALD1-222	ENST00000495522	ISG15	P05161	165 aa		13.72	□□□□□ -0.21
CALD1-222	ENST00000495522	CPN1	P15169	458 aa		13.72	□□□□□ -0.21
CALD1-222	ENST00000495522	ANXA7	P20073	488 aa	Known RBP	13.72	□□□□□ -0.21
CALD1-222	ENST00000495522	HTR2C	P28335	458 aa		13.72	□□□□□ -0.21
CALD1-222	ENST00000495522	SLC25A53	Q5H9E4	307 aa		13.72	□□□□□ -0.21
CALD1-222	ENST00000495522	LRFN4	Q6PJG9	635 aa		13.72	□□□□□ -0.21
CALD1-222	ENST00000495522	ZNF704	Q6ZNC4	412 aa	Predicted RBP	13.72	□□□□□ -0.21
CALD1-222	ENST00000495522	BIVM	Q86UB2	503 aa		13.72	□□□□□ -0.21
CALD1-222	ENST00000495522	SPIC	Q8N5J4	248 aa		13.72	□□□□□ -0.21
CALD1-222	ENST00000495522	OR4C16	Q8NGL9	310 aa		13.72	□□□□□ -0.21
CALD1-222	ENST00000495522	SLC25A28	Q96A46	364 aa		13.72	□□□□□ -0.21
CALD1-222	ENST00000495522	CCDC74B	Q96LY2	380 aa		13.72	□□□□□ -0.21
CALD1-222	ENST00000495522	CRB3	Q9BUF7	120 aa		13.72	□□□□□ -0.21
CALD1-222	ENST00000495522	FANCF	Q9NPI8	374 aa		13.72	□□□□□ -0.21
CALD1-222	ENST00000495522	SDHAF3	Q9NRP4	125 aa		13.72	□□□□□ -0.21
CALD1-222	ENST00000495522	ZNF69	Q9UC07	566 aa		13.72	□□□□□ -0.21
CALD1-222	ENST00000495522	SIT1	Q9Y3P8	196 aa		13.72	□□□□□ -0.21
CALD1-222	ENST00000495522	HRH3	Q9Y5N1	445 aa		13.72	□□□□□ -0.21
CALD1-222	ENST00000495522	IGLV3-32	A0A0A0MS00	114 aa		13.71	□□□□□ -0.21
CALD1-222	ENST00000495522	IGKV1D-43	A0A0B4J1Z2	117 aa		13.71	□□□□□ -0.21
CALD1-222	ENST00000495522		A0A1W2PNV4	684 aa		13.71	□□□□□ -0.21
CALD1-222	ENST00000495522	MEGF11	A6BM72	1044 aa		13.71	□□□□□ -0.21
CALD1-222	ENST00000495522	SNRPGP15	A8MWD9	76 aa		13.71	□□□□□ -0.21
CALD1-222	ENST00000495522	CREBL2	O60519	120 aa	Predicted RBP	13.71	□□□□□ -0.21
CALD1-222	ENST00000495522	TSPAN9	O75954	239 aa		13.71	□□□□□ -0.21
CALD1-222	ENST00000495522	KDM4B	O94953	1096 aa		13.71	□□□□□ -0.21
CALD1-222	ENST00000495522	CD37	P11049	281 aa		13.71	□□□□□ -0.21
CALD1-222	ENST00000495522	IL32	P24001	234 aa		13.71	□□□□□ -0.21
CALD1-222	ENST00000495522	PRSS3	P35030	304 aa		13.71	□□□□□ -0.21
CALD1-222	ENST00000495522	SSBP1	Q04837	148 aa	Known RBP	13.71	□□□□□ -0.21
CALD1-222	ENST00000495522	RBMS2	Q15434	407 aa	Known RBP	13.71	□□□□□ -0.21
CALD1-222	ENST00000495522	PLPPR5	Q32ZL2	321 aa		13.71	□□□□□ -0.21
CALD1-222	ENST00000495522	FAM69B	Q5VUD6	431 aa		13.71	□□□□□ -0.21
CALD1-222	ENST00000495522	TMEM205	Q6UW68	189 aa		13.71	□□□□□ -0.21
CALD1-222	ENST00000495522	ELMOD2	Q8IZ81	293 aa		13.71	□□□□□ -0.21
CALD1-222	ENST00000495522	MEIOB	Q8N635	442 aa		13.71	□□□□□ -0.21
CALD1-222	ENST00000495522	OR6M1	Q8NGM8	313 aa		13.71	□□□□□ -0.21
CALD1-222	ENST00000495522	SAP25	Q8TEE9	199 aa		13.71	□□□□□ -0.21
CALD1-222	ENST00000495522	RADIL	Q96JH8	1075 aa		13.71	□□□□□ -0.21
CALD1-222	ENST00000495522	SPSB2	Q99619	263 aa		13.71	□□□□□ -0.21
CALD1-222	ENST00000495522	ATG5	Q9H1Y0	275 aa		13.71	□□□□□ -0.21
CALD1-222	ENST00000495522	METTL7A	Q9H8H3	244 aa		13.71	□□□□□ -0.21
CALD1-222	ENST00000495522	MYOT	Q9UBF9	498 aa		13.71	□□□□□ -0.21
CALD1-222	ENST00000495522	C19orf25	Q9UFG5	118 aa	Predicted RBP	13.71	□□□□□ -0.21
CALD1-222	ENST00000495522	ELF5	Q9UKW6	265 aa	Predicted RBP	13.71	□□□□□ -0.21
CALD1-222	ENST00000495522	WIF1	Q9Y5W5	379 aa		13.71	□□□□□ -0.21
CALD1-222	ENST00000495522	CACNA1E	Q15878	2313 aa		13.71	□□□□□ -0.22
CALD1-222	ENST00000495522	TMEM269	A0A1B0GVZ9	245 aa		13.71	□□□□□ -0.22
CALD1-222	ENST00000495522		A0A1W2PQ72	361 aa		13.71	□□□□□ -0.22
CALD1-222	ENST00000495522	H2BFM	P0C1H6	154 aa		13.71	□□□□□ -0.22
CALD1-222	ENST00000495522	PTGDS	P41222	190 aa		13.71	□□□□□ -0.22
CALD1-222	ENST00000495522	BID	P55957	195 aa		13.71	□□□□□ -0.22
CALD1-222	ENST00000495522	GLYATL3	Q5SZD4	288 aa		13.71	□□□□□ -0.22
CALD1-222	ENST00000495522	TMEM244	Q5VVB8	128 aa		13.71	□□□□□ -0.22
CALD1-222	ENST00000495522	ZNF626	Q68DY1	528 aa		13.71	□□□□□ -0.22
CALD1-222	ENST00000495522	TEX261	Q6UWH6	196 aa		13.71	□□□□□ -0.22
CALD1-222	ENST00000495522	LYPD8	Q6UX82	237 aa		13.71	□□□□□ -0.22
CALD1-222	ENST00000495522	PPP1R3B	Q86XI6	285 aa		13.71	□□□□□ -0.22
CALD1-222	ENST00000495522	HIST2H2AB	Q8IUE6	130 aa	Predicted RBP	13.71	□□□□□ -0.22
CALD1-222	ENST00000495522	SLC22A8	Q8TCC7	542 aa		13.71	□□□□□ -0.22
CALD1-222	ENST00000495522	SERINC1	Q9NRX5	453 aa		13.71	□□□□□ -0.22
CALD1-222	ENST00000495522	MGAT4C	Q9UBM8	478 aa		13.71	□□□□□ -0.22
CALD1-222	ENST00000495522	EIF3K	Q9UBQ5	218 aa	Known RBP	13.71	□□□□□ -0.22
CALD1-222	ENST00000495522	RPH3A	Q9Y2J0	694 aa	Predicted RBP	13.71	□□□□□ -0.22
CALD1-222	ENST00000495522	SPEF1	Q9Y4P9	236 aa		13.71	□□□□□ -0.22
CALD1-222	ENST00000495522		U3KQ87	197 aa		13.71	□□□□□ -0.22
CALD1-222	ENST00000495522	MYO15A	Q9UKN7	3530 aa		13.7	□□□□□ -0.22
CALD1-222	ENST00000495522	EFNA2	O43921	213 aa		13.7	□□□□□ -0.22
CALD1-222	ENST00000495522	OR2J2	O76002	312 aa		13.7	□□□□□ -0.22
CALD1-222	ENST00000495522	UBC	P0CG48	685 aa	Known RBP	13.7	□□□□□ -0.22
CALD1-222	ENST00000495522	GUCA2A	Q02747	115 aa		13.7	□□□□□ -0.22
CALD1-222	ENST00000495522	LGALSL	Q3ZCW2	172 aa	Predicted RBP	13.7	□□□□□ -0.22
CALD1-222	ENST00000495522	OR10H5	Q8NGA6	315 aa		13.7	□□□□□ -0.22
CALD1-222	ENST00000495522	OR10G3	Q8NGC4	313 aa		13.7	□□□□□ -0.22
CALD1-222	ENST00000495522	RNF133	Q8WVZ7	376 aa		13.7	□□□□□ -0.22
CALD1-222	ENST00000495522	RBP7	Q96R05	134 aa		13.7	□□□□□ -0.22
CALD1-222	ENST00000495522	SLC26A1	Q9H2B4	701 aa		13.7	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms