RNA–Protein interactions for RNA: ENST00000495515.1

HDAC6-235, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-235ENST00000495515 GALK2Q01415 458 aa14.84□□□□□ -0.03
HDAC6-235ENST00000495515 DBPQ10586 325 aaPredicted RBP14.84□□□□□ -0.03
HDAC6-235ENST00000495515 KEAP1Q14145 624 aa14.84□□□□□ -0.03
HDAC6-235ENST00000495515 RAB35Q15286 201 aa14.84□□□□□ -0.03
HDAC6-235ENST00000495515 TEX30Q5JUR7 227 aa14.84□□□□□ -0.03
HDAC6-235ENST00000495515 ZNF774Q6NX45 483 aa14.84□□□□□ -0.03
HDAC6-235ENST00000495515 UNQ6126/PRO20091Q6UXV3 157 aa14.84□□□□□ -0.03
HDAC6-235ENST00000495515 MEPCEQ7L2J0 689 aaKnown RBP14.84□□□□□ -0.03
HDAC6-235ENST00000495515 SHFQ7M4L6 423 aa14.84□□□□□ -0.03
HDAC6-235ENST00000495515 ZNF584Q8IVC4 421 aa14.84□□□□□ -0.03
HDAC6-235ENST00000495515 BBS1Q8NFJ9 593 aa14.84□□□□□ -0.03
HDAC6-235ENST00000495515 KBTBD8Q8NFY9 601 aa14.84□□□□□ -0.03
HDAC6-235ENST00000495515 AKR7LQ8NHP1 331 aa14.84□□□□□ -0.03
HDAC6-235ENST00000495515 ZNRF4Q8WWF5 429 aa14.84□□□□□ -0.03
HDAC6-235ENST00000495515 AKAP1Q92667 903 aaKnown RBP eCLIP14.84□□□□□ -0.03
HDAC6-235ENST00000495515 RFKQ969G6 155 aa14.84□□□□□ -0.03
HDAC6-235ENST00000495515 ZMYND19Q96E35 227 aaPredicted RBP14.84□□□□□ -0.03
HDAC6-235ENST00000495515 TEAD3Q99594 435 aa14.84□□□□□ -0.03
HDAC6-235ENST00000495515 HDHD2Q9H0R4 259 aa14.84□□□□□ -0.03
HDAC6-235ENST00000495515 WNT5BQ9H1J7 359 aa14.84□□□□□ -0.03
HDAC6-235ENST00000495515 ATPIF1Q9UII2 106 aa14.84□□□□□ -0.03
HDAC6-235ENST00000495515 LHFPL6Q9Y693 200 aa14.84□□□□□ -0.03
HDAC6-235ENST00000495515 ATP23Q9Y6H3 246 aa14.84□□□□□ -0.03
HDAC6-235ENST00000495515 UNC79Q9P2D8 2635 aa14.84□□□□□ -0.03
HDAC6-235ENST00000495515 IGHV2OR16-5A0A0B4J2B6 119 aa14.83□□□□□ -0.04
HDAC6-235ENST00000495515 SNTNA6NMZ2 147 aa14.83□□□□□ -0.04
HDAC6-235ENST00000495515 SHISA9B4DS77 424 aa14.83□□□□□ -0.04
HDAC6-235ENST00000495515 E9PQ18 207 aa14.83□□□□□ -0.04
HDAC6-235ENST00000495515 ATP6V1G2-DDX39BF2Z307 99 aa14.83□□□□□ -0.04
HDAC6-235ENST00000495515 M0R129 80 aa14.83□□□□□ -0.04
HDAC6-235ENST00000495515 RER1O15258 196 aa14.83□□□□□ -0.04
HDAC6-235ENST00000495515 ATP6V1G2O95670 118 aa14.83□□□□□ -0.04
HDAC6-235ENST00000495515 PLAUP00749 431 aa14.83□□□□□ -0.04
HDAC6-235ENST00000495515 SPARCP09486 303 aa14.83□□□□□ -0.04
HDAC6-235ENST00000495515 SLC2A5P22732 501 aa14.83□□□□□ -0.04
HDAC6-235ENST00000495515 APEX1P27695 318 aaKnown RBP14.83□□□□□ -0.04
HDAC6-235ENST00000495515 HTR5AP47898 357 aa14.83□□□□□ -0.04
HDAC6-235ENST00000495515 SNRPGP62308 76 aaKnown RBP14.83□□□□□ -0.04
HDAC6-235ENST00000495515 ECH1Q13011 328 aa14.83□□□□□ -0.04
HDAC6-235ENST00000495515 ZNF672Q499Z4 452 aaPredicted RBP14.83□□□□□ -0.04
HDAC6-235ENST00000495515 AADACL4Q5VUY2 407 aa14.83□□□□□ -0.04
HDAC6-235ENST00000495515 MEDAGQ5VYS4 303 aa14.83□□□□□ -0.04
HDAC6-235ENST00000495515 OTPQ5XKR4 325 aa14.83□□□□□ -0.04
HDAC6-235ENST00000495515 SLC18B1Q6NT16 456 aa14.83□□□□□ -0.04
HDAC6-235ENST00000495515 ARL9Q6T311 187 aa14.83□□□□□ -0.04
HDAC6-235ENST00000495515 ERI1Q8IV48 349 aaKnown RBP14.83□□□□□ -0.04
HDAC6-235ENST00000495515 LINC00346Q8IVM7 164 aa14.83□□□□□ -0.04
HDAC6-235ENST00000495515 DHRSXQ8N5I4 330 aa14.83□□□□□ -0.04
HDAC6-235ENST00000495515 CPEB3Q8NE35 698 aaKnown RBP14.83□□□□□ -0.04
HDAC6-235ENST00000495515 OR6N2Q8NGY6 317 aa14.83□□□□□ -0.04
HDAC6-235ENST00000495515 FBXW5Q969U6 566 aa14.83□□□□□ -0.04
HDAC6-235ENST00000495515 WDR76Q9H967 626 aa14.83□□□□□ -0.04
HDAC6-235ENST00000495515 MARCH7Q9H992 704 aa14.83□□□□□ -0.04
HDAC6-235ENST00000495515 CISD1Q9NZ45 108 aaKnown RBP14.83□□□□□ -0.04
HDAC6-235ENST00000495515 EIF3KQ9UBQ5 218 aaKnown RBP14.83□□□□□ -0.04
HDAC6-235ENST00000495515 GDF2Q9UK05 429 aaPredicted RBP14.83□□□□□ -0.04
HDAC6-235ENST00000495515 NBPF19A0A087WUL8 3843 aa14.83□□□□□ -0.04
HDAC6-235ENST00000495515 H0YJX3 145 aa14.82□□□□□ -0.04
HDAC6-235ENST00000495515 HS3ST1O14792 307 aa14.82□□□□□ -0.04
HDAC6-235ENST00000495515 ZNF35P13682 527 aa14.82□□□□□ -0.04
HDAC6-235ENST00000495515 HIST1H3AP68431 136 aa14.82□□□□□ -0.04
HDAC6-235ENST00000495515 SPOCK1Q08629 439 aa14.82□□□□□ -0.04
HDAC6-235ENST00000495515 TMED1Q13445 227 aa14.82□□□□□ -0.04
HDAC6-235ENST00000495515 PCK2Q16822 640 aa14.82□□□□□ -0.04
HDAC6-235ENST00000495515 ELFN2Q5R3F8 820 aa14.82□□□□□ -0.04
HDAC6-235ENST00000495515 HIST2H3PS2Q5TEC6 136 aa14.82□□□□□ -0.04
HDAC6-235ENST00000495515 CORO6Q6QEF8 472 aa14.82□□□□□ -0.04
HDAC6-235ENST00000495515 LYPD4Q6UWN0 246 aa14.82□□□□□ -0.04
HDAC6-235ENST00000495515 C20orf204Q6ZNR8 217 aa14.82□□□□□ -0.04
HDAC6-235ENST00000495515 HIST2H3AQ71DI3 136 aa14.82□□□□□ -0.04
HDAC6-235ENST00000495515 VASH1Q7L8A9 365 aaPredicted RBP14.82□□□□□ -0.04
HDAC6-235ENST00000495515 MYPOPQ86VE0 399 aaPredicted RBP14.82□□□□□ -0.04
HDAC6-235ENST00000495515 ZNF454Q8N9F8 522 aa14.82□□□□□ -0.04
HDAC6-235ENST00000495515 OR1F12Q8NHA8 337 aa14.82□□□□□ -0.04
HDAC6-235ENST00000495515 CYGBQ8WWM9 190 aa14.82□□□□□ -0.04
HDAC6-235ENST00000495515 IPCEF1Q8WWN9 437 aaPredicted RBP14.82□□□□□ -0.04
HDAC6-235ENST00000495515 Q96MT0 163 aa14.82□□□□□ -0.04
HDAC6-235ENST00000495515 PLEKHF2Q9H8W4 249 aa14.82□□□□□ -0.04
HDAC6-235ENST00000495515 UBTD1Q9HAC8 227 aa14.82□□□□□ -0.04
HDAC6-235ENST00000495515 FAIMQ9NVQ4 179 aa14.82□□□□□ -0.04
HDAC6-235ENST00000495515 WARS2Q9UGM6 360 aaKnown RBP14.82□□□□□ -0.04
HDAC6-235ENST00000495515 A0A1W2PPR1 153 aa14.81□□□□□ -0.04
HDAC6-235ENST00000495515 C5orf49A4QMS7 147 aa14.81□□□□□ -0.04
HDAC6-235ENST00000495515 OR6C6A6NF89 314 aa14.81□□□□□ -0.04
HDAC6-235ENST00000495515 DLGAP1O14490 977 aa14.81□□□□□ -0.04
HDAC6-235ENST00000495515 CCNOP22674 350 aa14.81□□□□□ -0.04
HDAC6-235ENST00000495515 CALCRP30988 508 aa14.81□□□□□ -0.04
HDAC6-235ENST00000495515 RPS23P62266 143 aaKnown RBP14.81□□□□□ -0.04
HDAC6-235ENST00000495515 CCDC92Q53HC0 331 aaPredicted RBP14.81□□□□□ -0.04
HDAC6-235ENST00000495515 SLC25A30Q5SVS4 291 aa14.81□□□□□ -0.04
HDAC6-235ENST00000495515 TIGD4Q8IY51 512 aa14.81□□□□□ -0.04
HDAC6-235ENST00000495515 ZNF611Q8N823 705 aa14.81□□□□□ -0.04
HDAC6-235ENST00000495515 SETD9Q8NE22 299 aa14.81□□□□□ -0.04
HDAC6-235ENST00000495515 NUP37Q8NFH4 326 aa14.81□□□□□ -0.04
HDAC6-235ENST00000495515 POM121L2Q96KW2 1035 aa14.81□□□□□ -0.04
HDAC6-235ENST00000495515 DCLRE1CQ96SD1 692 aaKnown RBP14.81□□□□□ -0.04
HDAC6-235ENST00000495515 COQ7Q99807 217 aa14.81□□□□□ -0.04
HDAC6-235ENST00000495515 ADI1Q9BV57 179 aa14.81□□□□□ -0.04
HDAC6-235ENST00000495515 HAO2Q9NYQ3 351 aa14.81□□□□□ -0.04
HDAC6-235ENST00000495515 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms