RNA–Protein interactions for RNA: ENST00000494993.1

HDDC3-203, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,220 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-203ENST00000494993 FNDC11Q9BVV2 318 aa18.65■□□□□ 0.58
HDDC3-203ENST00000494993 VIPAS39Q9H9C1 493 aa18.65■□□□□ 0.58
HDDC3-203ENST00000494993 TMEM106BQ9NUM4 274 aa18.65■□□□□ 0.58
HDDC3-203ENST00000494993 TBCCD1Q9NVR7 557 aa18.65■□□□□ 0.58
HDDC3-203ENST00000494993 RHCGQ9UBD6 479 aa18.65■□□□□ 0.58
HDDC3-203ENST00000494993 LOC100653049A0A140TA62 436 aa18.64■□□□□ 0.57
HDDC3-203ENST00000494993 ELOVL7A1L3X0 281 aa18.64■□□□□ 0.57
HDDC3-203ENST00000494993 EFCAB9A8MZ26 197 aa18.64■□□□□ 0.57
HDDC3-203ENST00000494993 H7C1C5 153 aa18.64■□□□□ 0.57
HDDC3-203ENST00000494993 J3KTA2 159 aa18.64■□□□□ 0.57
HDDC3-203ENST00000494993 KRT34O76011 436 aa18.64■□□□□ 0.57
HDDC3-203ENST00000494993 TROVE2P10155 538 aaKnown RBP eCLIP18.64■□□□□ 0.57
HDDC3-203ENST00000494993 GSTM3P21266 225 aa18.64■□□□□ 0.57
HDDC3-203ENST00000494993 SLC9A3P48764 834 aa18.64■□□□□ 0.57
HDDC3-203ENST00000494993 LCN6P62502 163 aa18.64■□□□□ 0.57
HDDC3-203ENST00000494993 UBA52P62987 128 aaKnown RBP18.64■□□□□ 0.57
HDDC3-203ENST00000494993 VTCN1Q7Z7D3 282 aa18.64■□□□□ 0.57
HDDC3-203ENST00000494993 OR13C2Q8NGS9 318 aa18.64■□□□□ 0.57
HDDC3-203ENST00000494993 DVL3Q92997 716 aaPredicted RBP18.64■□□□□ 0.57
HDDC3-203ENST00000494993 DCLRE1CQ96SD1 692 aaKnown RBP18.64■□□□□ 0.57
HDDC3-203ENST00000494993 POFUT1Q9H488 388 aa18.64■□□□□ 0.57
HDDC3-203ENST00000494993 NTN4Q9HB63 628 aa18.64■□□□□ 0.57
HDDC3-203ENST00000494993 EMC7Q9NPA0 242 aa18.64■□□□□ 0.57
HDDC3-203ENST00000494993 PURGQ9UJV8 347 aaKnown RBP18.64■□□□□ 0.57
HDDC3-203ENST00000494993 SNX13Q9Y5W8 968 aa18.64■□□□□ 0.57
HDDC3-203ENST00000494993 MGAM2Q2M2H8 2515 aa18.64■□□□□ 0.57
HDDC3-203ENST00000494993 DOK2O60496 412 aa18.63■□□□□ 0.57
HDDC3-203ENST00000494993 IFNW1P05000 195 aa18.63■□□□□ 0.57
HDDC3-203ENST00000494993 SBK2P0C263 348 aa18.63■□□□□ 0.57
HDDC3-203ENST00000494993 TUBG1P23258 451 aa18.63■□□□□ 0.57
HDDC3-203ENST00000494993 TNFSF4P23510 183 aa18.63■□□□□ 0.57
HDDC3-203ENST00000494993 HTR5AP47898 357 aa18.63■□□□□ 0.57
HDDC3-203ENST00000494993 SCRN3Q0VDG4 424 aa18.63■□□□□ 0.57
HDDC3-203ENST00000494993 AWAT1Q58HT5 328 aa18.63■□□□□ 0.57
HDDC3-203ENST00000494993 Q6ZR03 302 aa18.63■□□□□ 0.57
HDDC3-203ENST00000494993 SPICQ8N5J4 248 aa18.63■□□□□ 0.57
HDDC3-203ENST00000494993 ZNF283Q8N7M2 679 aa18.63■□□□□ 0.57
HDDC3-203ENST00000494993 ACOT11Q8WXI4 607 aaPredicted RBP18.63■□□□□ 0.57
HDDC3-203ENST00000494993 POP5Q969H6 163 aaKnown RBP18.63■□□□□ 0.57
HDDC3-203ENST00000494993 SAMD8Q96LT4 415 aa18.63■□□□□ 0.57
HDDC3-203ENST00000494993 TUBG2Q9NRH3 451 aa18.63■□□□□ 0.57
HDDC3-203ENST00000494993 EGFL7Q9UHF1 273 aa18.63■□□□□ 0.57
HDDC3-203ENST00000494993 FFAR1O14842 300 aa18.62■□□□□ 0.57
HDDC3-203ENST00000494993 SGCEO43556 437 aa18.62■□□□□ 0.57
HDDC3-203ENST00000494993 TNFRSF1AP19438 455 aa18.62■□□□□ 0.57
HDDC3-203ENST00000494993 KITLGP21583 273 aa18.62■□□□□ 0.57
HDDC3-203ENST00000494993 RBMXP38159 391 aaKnown RBP18.62■□□□□ 0.57
HDDC3-203ENST00000494993 SF3A3Q12874 501 aaKnown RBP eCLIP18.62■□□□□ 0.57
HDDC3-203ENST00000494993 TMEM155Q4W5P6 130 aa18.62■□□□□ 0.57
HDDC3-203ENST00000494993 RNF113BQ8IZP6 322 aaKnown RBP18.62■□□□□ 0.57
HDDC3-203ENST00000494993 FAM156AQ8NDB6 213 aa18.62■□□□□ 0.57
HDDC3-203ENST00000494993 DEFB108BQ8NET1 73 aa18.62■□□□□ 0.57
HDDC3-203ENST00000494993 OR2Z1Q8NG97 314 aa18.62■□□□□ 0.57
HDDC3-203ENST00000494993 PATZ1Q9HBE1 687 aaKnown RBP18.62■□□□□ 0.57
HDDC3-203ENST00000494993 MMP26Q9NRE1 261 aa18.62■□□□□ 0.57
HDDC3-203ENST00000494993 DDX28Q9NUL7 540 aaKnown RBP18.62■□□□□ 0.57
HDDC3-203ENST00000494993 GRHPRQ9UBQ7 328 aa18.62■□□□□ 0.57
HDDC3-203ENST00000494993 POLR3KQ9Y2Y1 108 aaPredicted RBP18.62■□□□□ 0.57
HDDC3-203ENST00000494993 ADAM18Q9Y3Q7 739 aa18.62■□□□□ 0.57
HDDC3-203ENST00000494993 PPIAL4AQ9Y536 164 aa18.62■□□□□ 0.57
HDDC3-203ENST00000494993 A0A087WUU8 490 aa18.61■□□□□ 0.57
HDDC3-203ENST00000494993 CDC42EP2O14613 210 aa18.61■□□□□ 0.57
HDDC3-203ENST00000494993 CD14P08571 375 aa18.61■□□□□ 0.57
HDDC3-203ENST00000494993 RPL4P36578 427 aaKnown RBP18.61■□□□□ 0.57
HDDC3-203ENST00000494993 GPR4P46093 362 aa18.61■□□□□ 0.57
HDDC3-203ENST00000494993 TUSC1Q2TAM9 212 aa18.61■□□□□ 0.57
HDDC3-203ENST00000494993 MESTQ5EB52 335 aa18.61■□□□□ 0.57
HDDC3-203ENST00000494993 ZNF730Q6ZMV8 503 aa18.61■□□□□ 0.57
HDDC3-203ENST00000494993 VASH1Q7L8A9 365 aaPredicted RBP18.61■□□□□ 0.57
HDDC3-203ENST00000494993 KLHL36Q8N4N3 616 aa18.61■□□□□ 0.57
HDDC3-203ENST00000494993 Q96M85 177 aa18.61■□□□□ 0.57
HDDC3-203ENST00000494993 FGFR1OP2Q9NVK5 253 aa18.61■□□□□ 0.57
HDDC3-203ENST00000494993 CMTM6Q9NX76 183 aa18.61■□□□□ 0.57
HDDC3-203ENST00000494993 GMPR2Q9P2T1 348 aaKnown RBP18.61■□□□□ 0.57
HDDC3-203ENST00000494993 STARD10Q9Y365 291 aa18.61■□□□□ 0.57
HDDC3-203ENST00000494993 TRAPPC2LH3BP13 241 aa18.6■□□□□ 0.57
HDDC3-203ENST00000494993 XKRYO14609 159 aa18.6■□□□□ 0.57
HDDC3-203ENST00000494993 WIPF1O43516 503 aa18.6■□□□□ 0.57
HDDC3-203ENST00000494993 AHCYL1O43865 530 aa18.6■□□□□ 0.57
HDDC3-203ENST00000494993 ZNF12P17014 697 aa18.6■□□□□ 0.57
HDDC3-203ENST00000494993 BTG1P62324 171 aa18.6■□□□□ 0.57
HDDC3-203ENST00000494993 ARMCX4Q5H9R4 360 aa18.6■□□□□ 0.57
HDDC3-203ENST00000494993 CGB2Q6NT52 195 aa18.6■□□□□ 0.57
HDDC3-203ENST00000494993 TBPL2Q6SJ96 375 aa18.6■□□□□ 0.57
HDDC3-203ENST00000494993 MBOAT2Q6ZWT7 520 aa18.6■□□□□ 0.57
HDDC3-203ENST00000494993 FAM122BQ7Z309 247 aa18.6■□□□□ 0.57
HDDC3-203ENST00000494993 LRRC28Q86X40 367 aaPredicted RBP18.6■□□□□ 0.57
HDDC3-203ENST00000494993 ITLN1Q8WWA0 313 aa18.6■□□□□ 0.57
HDDC3-203ENST00000494993 RCN3Q96D15 328 aa18.6■□□□□ 0.57
HDDC3-203ENST00000494993 CMBLQ96DG6 245 aa18.6■□□□□ 0.57
HDDC3-203ENST00000494993 ZNF570Q96NI8 536 aa18.6■□□□□ 0.57
HDDC3-203ENST00000494993 SIGLEC11Q96RL6 698 aa18.6■□□□□ 0.57
HDDC3-203ENST00000494993 IL19Q9UHD0 177 aa18.6■□□□□ 0.57
HDDC3-203ENST00000494993 AP3M1Q9Y2T2 418 aa18.6■□□□□ 0.57
HDDC3-203ENST00000494993 CAPN7Q9Y6W3 813 aa18.6■□□□□ 0.57
HDDC3-203ENST00000494993 TEX13CA0A0J9YWL9 993 aa18.59■□□□□ 0.57
HDDC3-203ENST00000494993 PRSS37A4D1T9 235 aa18.59■□□□□ 0.57
HDDC3-203ENST00000494993 F5H0A9 414 aaPredicted RBP18.59■□□□□ 0.57
HDDC3-203ENST00000494993 ZNF682O95780 498 aa18.59■□□□□ 0.57
HDDC3-203ENST00000494993 CTLA4P16410 223 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms