RNA–Protein interactions for RNA: ENST00000494780.1

COL27A1-208, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 4

Gene COL27A1, Length 514 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-208ENST00000494780 IGHV2-70P01814 119 aa19.63■□□□□ 0.73
COL27A1-208ENST00000494780 IFNW1P05000 195 aa19.63■□□□□ 0.73
COL27A1-208ENST00000494780 FUT4P22083 530 aa19.63■□□□□ 0.73
COL27A1-208ENST00000494780 TNFSF4P23510 183 aa19.63■□□□□ 0.73
COL27A1-208ENST00000494780 YAP1P46937 504 aaKnown RBP19.63■□□□□ 0.73
COL27A1-208ENST00000494780 ZDHHC22Q8N966 263 aa19.63■□□□□ 0.73
COL27A1-208ENST00000494780 FAM156AQ8NDB6 213 aa19.63■□□□□ 0.73
COL27A1-208ENST00000494780 SAMD8Q96LT4 415 aa19.63■□□□□ 0.73
COL27A1-208ENST00000494780 NTN4Q9HB63 628 aa19.63■□□□□ 0.73
COL27A1-208ENST00000494780 ESM1Q9NQ30 184 aa19.63■□□□□ 0.73
COL27A1-208ENST00000494780 TMEM106BQ9NUM4 274 aa19.63■□□□□ 0.73
COL27A1-208ENST00000494780 RHCGQ9UBD6 479 aa19.63■□□□□ 0.73
COL27A1-208ENST00000494780 AP3M1Q9Y2T2 418 aa19.63■□□□□ 0.73
COL27A1-208ENST00000494780 AHCYL1O43865 530 aa19.62■□□□□ 0.73
COL27A1-208ENST00000494780 SCG5P05408 212 aa19.62■□□□□ 0.73
COL27A1-208ENST00000494780 ZFP36P26651 326 aaKnown RBP19.62■□□□□ 0.73
COL27A1-208ENST00000494780 SCRN3Q0VDG4 424 aa19.62■□□□□ 0.73
COL27A1-208ENST00000494780 SPICQ8N5J4 248 aa19.62■□□□□ 0.73
COL27A1-208ENST00000494780 OR13C2Q8NGS9 318 aa19.62■□□□□ 0.73
COL27A1-208ENST00000494780 ACOT11Q8WXI4 607 aaPredicted RBP19.62■□□□□ 0.73
COL27A1-208ENST00000494780 POP5Q969H6 163 aaKnown RBP19.62■□□□□ 0.73
COL27A1-208ENST00000494780 DCLRE1CQ96SD1 692 aaKnown RBP19.62■□□□□ 0.73
COL27A1-208ENST00000494780 EMC7Q9NPA0 242 aa19.62■□□□□ 0.73
COL27A1-208ENST00000494780 DCAF16Q9NXF7 216 aa19.62■□□□□ 0.73
COL27A1-208ENST00000494780 GRHPRQ9UBQ7 328 aa19.62■□□□□ 0.73
COL27A1-208ENST00000494780 PURGQ9UJV8 347 aaKnown RBP19.62■□□□□ 0.73
COL27A1-208ENST00000494780 SNX13Q9Y5W8 968 aa19.62■□□□□ 0.73
COL27A1-208ENST00000494780 H7C1C5 153 aa19.61■□□□□ 0.73
COL27A1-208ENST00000494780 J3KTA2 159 aa19.61■□□□□ 0.73
COL27A1-208ENST00000494780 FFAR1O14842 300 aa19.61■□□□□ 0.73
COL27A1-208ENST00000494780 SBK2P0C263 348 aa19.61■□□□□ 0.73
COL27A1-208ENST00000494780 EGR1P18146 543 aa19.61■□□□□ 0.73
COL27A1-208ENST00000494780 TNFRSF1AP19438 455 aa19.61■□□□□ 0.73
COL27A1-208ENST00000494780 KITLGP21583 273 aa19.61■□□□□ 0.73
COL27A1-208ENST00000494780 LCN6P62502 163 aa19.61■□□□□ 0.73
COL27A1-208ENST00000494780 TMEM155Q4W5P6 130 aa19.61■□□□□ 0.73
COL27A1-208ENST00000494780 ZNF730Q6ZMV8 503 aa19.61■□□□□ 0.73
COL27A1-208ENST00000494780 MBOAT2Q6ZWT7 520 aa19.61■□□□□ 0.73
COL27A1-208ENST00000494780 VTCN1Q7Z7D3 282 aa19.61■□□□□ 0.73
COL27A1-208ENST00000494780 ZNF283Q8N7M2 679 aa19.61■□□□□ 0.73
COL27A1-208ENST00000494780 DVL3Q92997 716 aaPredicted RBP19.61■□□□□ 0.73
COL27A1-208ENST00000494780 COG8Q96MW5 612 aa19.61■□□□□ 0.73
COL27A1-208ENST00000494780 POLR3KQ9Y2Y1 108 aaPredicted RBP19.61■□□□□ 0.73
COL27A1-208ENST00000494780 ARHGAP32A7KAX9 2087 aa19.61■□□□□ 0.73
COL27A1-208ENST00000494780 A0A087WUU8 490 aa19.6■□□□□ 0.73
COL27A1-208ENST00000494780 XKRYO14609 159 aa19.6■□□□□ 0.73
COL27A1-208ENST00000494780 SGCEO43556 437 aa19.6■□□□□ 0.73
COL27A1-208ENST00000494780 DOK2O60496 412 aa19.6■□□□□ 0.73
COL27A1-208ENST00000494780 CD14P08571 375 aa19.6■□□□□ 0.73
COL27A1-208ENST00000494780 RPL4P36578 427 aaKnown RBP19.6■□□□□ 0.73
COL27A1-208ENST00000494780 HTR5AP47898 357 aa19.6■□□□□ 0.73
COL27A1-208ENST00000494780 UBA52P62987 128 aaKnown RBP19.6■□□□□ 0.73
COL27A1-208ENST00000494780 TMPRSS11FQ6ZWK6 438 aa19.6■□□□□ 0.73
COL27A1-208ENST00000494780 ARPINQ7Z6K5 226 aa19.6■□□□□ 0.73
COL27A1-208ENST00000494780 KLHL36Q8N4N3 616 aa19.6■□□□□ 0.73
COL27A1-208ENST00000494780 DEFB108BQ8NET1 73 aa19.6■□□□□ 0.73
COL27A1-208ENST00000494780 OR2Z1Q8NG97 314 aa19.6■□□□□ 0.73
COL27A1-208ENST00000494780 C22orf15Q8WYQ4 148 aa19.6■□□□□ 0.73
COL27A1-208ENST00000494780 NDEL1Q9GZM8 345 aa19.6■□□□□ 0.73
COL27A1-208ENST00000494780 POFUT1Q9H488 388 aa19.6■□□□□ 0.73
COL27A1-208ENST00000494780 PATZ1Q9HBE1 687 aaKnown RBP19.6■□□□□ 0.73
COL27A1-208ENST00000494780 DDX28Q9NUL7 540 aaKnown RBP19.6■□□□□ 0.73
COL27A1-208ENST00000494780 FGFR1OP2Q9NVK5 253 aa19.6■□□□□ 0.73
COL27A1-208ENST00000494780 ARGLU1Q9NWB6 273 aaPredicted RBP19.6■□□□□ 0.73
COL27A1-208ENST00000494780 CMTM6Q9NX76 183 aa19.6■□□□□ 0.73
COL27A1-208ENST00000494780 ADAM18Q9Y3Q7 739 aa19.6■□□□□ 0.73
COL27A1-208ENST00000494780 CAPN7Q9Y6W3 813 aa19.6■□□□□ 0.73
COL27A1-208ENST00000494780 SLC22A2O15244 555 aa19.59■□□□□ 0.73
COL27A1-208ENST00000494780 TUSC1Q2TAM9 212 aa19.59■□□□□ 0.73
COL27A1-208ENST00000494780 ZBED5Q49AG3 693 aa19.59■□□□□ 0.73
COL27A1-208ENST00000494780 AWAT1Q58HT5 328 aa19.59■□□□□ 0.73
COL27A1-208ENST00000494780 MESTQ5EB52 335 aa19.59■□□□□ 0.73
COL27A1-208ENST00000494780 Q6ZR03 302 aa19.59■□□□□ 0.73
COL27A1-208ENST00000494780 VASH1Q7L8A9 365 aaPredicted RBP19.59■□□□□ 0.73
COL27A1-208ENST00000494780 LRRC28Q86X40 367 aaPredicted RBP19.59■□□□□ 0.73
COL27A1-208ENST00000494780 CMBLQ96DG6 245 aa19.59■□□□□ 0.73
COL27A1-208ENST00000494780 Q96M85 177 aa19.59■□□□□ 0.73
COL27A1-208ENST00000494780 MMP26Q9NRE1 261 aa19.59■□□□□ 0.73
COL27A1-208ENST00000494780 IL19Q9UHD0 177 aa19.59■□□□□ 0.73
COL27A1-208ENST00000494780 EGFL7Q9UHF1 273 aa19.59■□□□□ 0.73
COL27A1-208ENST00000494780 STARD10Q9Y365 291 aa19.59■□□□□ 0.73
COL27A1-208ENST00000494780 PRSS37A4D1T9 235 aa19.58■□□□□ 0.72
COL27A1-208ENST00000494780 CDC42EP2O14613 210 aa19.58■□□□□ 0.72
COL27A1-208ENST00000494780 SURF4O15260 269 aa19.58■□□□□ 0.72
COL27A1-208ENST00000494780 GPR4P46093 362 aa19.58■□□□□ 0.72
COL27A1-208ENST00000494780 SLC6A9P48067 706 aa19.58■□□□□ 0.72
COL27A1-208ENST00000494780 HNRNPA0Q13151 305 aaKnown RBP19.58■□□□□ 0.72
COL27A1-208ENST00000494780 AQP6Q13520 282 aa19.58■□□□□ 0.72
COL27A1-208ENST00000494780 IFI44LQ53G44 452 aa19.58■□□□□ 0.72
COL27A1-208ENST00000494780 CGB2Q6NT52 195 aa19.58■□□□□ 0.72
COL27A1-208ENST00000494780 TBPL2Q6SJ96 375 aa19.58■□□□□ 0.72
COL27A1-208ENST00000494780 RBMS3Q6XE24 437 aaKnown RBP19.58■□□□□ 0.72
COL27A1-208ENST00000494780 FAM122BQ7Z309 247 aa19.58■□□□□ 0.72
COL27A1-208ENST00000494780 RCN3Q96D15 328 aa19.58■□□□□ 0.72
COL27A1-208ENST00000494780 HAVCR1Q96D42 359 aa19.58■□□□□ 0.72
COL27A1-208ENST00000494780 ZNF570Q96NI8 536 aa19.58■□□□□ 0.72
COL27A1-208ENST00000494780 PPP1R3CQ9UQK1 317 aa19.58■□□□□ 0.72
COL27A1-208ENST00000494780 TEX13CA0A0J9YWL9 993 aa19.57■□□□□ 0.72
COL27A1-208ENST00000494780 CXCR6O00574 342 aa19.57■□□□□ 0.72
COL27A1-208ENST00000494780 ZNF682O95780 498 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms