RNA–Protein interactions for RNA: ENST00000494667.5

PRKD3-210, Transcript of protein kinase D3, humanhuman

TSL 1 (best)

Gene PRKD3, Length 4,326 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-210ENST00000494667 TAF9BQ9HBM6 251 aa4.33□□□□□ -1.72
PRKD3-210ENST00000494667 OR14J1Q9UGF5 321 aa4.33□□□□□ -1.72
PRKD3-210ENST00000494667 CHRNA9Q9UGM1 479 aa4.33□□□□□ -1.72
PRKD3-210ENST00000494667 IKZF2Q9UKS7 526 aa4.33□□□□□ -1.72
PRKD3-210ENST00000494667 NOP16Q9Y3C1 178 aaKnown RBP4.33□□□□□ -1.72
PRKD3-210ENST00000494667 LRP3O75074 770 aa4.33□□□□□ -1.72
PRKD3-210ENST00000494667 GPANK1O95872 356 aa4.33□□□□□ -1.72
PRKD3-210ENST00000494667 IL6RP08887 468 aaPredicted RBP4.33□□□□□ -1.72
PRKD3-210ENST00000494667 NPPBP16860 134 aa4.33□□□□□ -1.72
PRKD3-210ENST00000494667 BCKDHBP21953 392 aa4.33□□□□□ -1.72
PRKD3-210ENST00000494667 EPHA8P29322 1005 aaPredicted RBP4.33□□□□□ -1.72
PRKD3-210ENST00000494667 GNG10P50151 68 aa4.33□□□□□ -1.72
PRKD3-210ENST00000494667 CASP9P55211 416 aa4.33□□□□□ -1.72
PRKD3-210ENST00000494667 DMWDQ09019 674 aa4.33□□□□□ -1.72
PRKD3-210ENST00000494667 FOXF1Q12946 379 aa4.33□□□□□ -1.72
PRKD3-210ENST00000494667 PPP1R1AQ13522 171 aa4.33□□□□□ -1.72
PRKD3-210ENST00000494667 AMZ1Q400G9 498 aa4.33□□□□□ -1.72
PRKD3-210ENST00000494667 EIPR1Q53HC9 387 aa4.33□□□□□ -1.72
PRKD3-210ENST00000494667 NXPE4Q6UWF7 544 aa4.33□□□□□ -1.72
PRKD3-210ENST00000494667 SYT9Q86SS6 491 aa4.33□□□□□ -1.72
PRKD3-210ENST00000494667 FRMD1Q8N878 549 aa4.33□□□□□ -1.72
PRKD3-210ENST00000494667 RNF128Q8TEB7 428 aa4.33□□□□□ -1.72
PRKD3-210ENST00000494667 ABHD5Q8WTS1 349 aa4.33□□□□□ -1.72
PRKD3-210ENST00000494667 CDS1Q92903 461 aa4.33□□□□□ -1.72
PRKD3-210ENST00000494667 ACY3Q96HD9 319 aa4.33□□□□□ -1.72
PRKD3-210ENST00000494667 SLC41A2Q96JW4 573 aa4.33□□□□□ -1.72
PRKD3-210ENST00000494667 C20orf144Q9BQM9 153 aa4.33□□□□□ -1.72
PRKD3-210ENST00000494667 SPACA1Q9HBV2 294 aa4.33□□□□□ -1.72
PRKD3-210ENST00000494667 FAM212BQ9NTI7 297 aaPredicted RBP4.33□□□□□ -1.72
PRKD3-210ENST00000494667 SUSD2Q9UGT4 822 aa4.33□□□□□ -1.72
PRKD3-210ENST00000494667 PIN4Q9Y237 131 aaKnown RBP4.33□□□□□ -1.72
PRKD3-210ENST00000494667 RHBDD3Q9Y3P4 386 aa4.33□□□□□ -1.72
PRKD3-210ENST00000494667 SLCO1B1Q9Y6L6 691 aa4.33□□□□□ -1.72
PRKD3-210ENST00000494667 C1QTNF3-AMACRE9PGA6 284 aa4.32□□□□□ -1.72
PRKD3-210ENST00000494667 UPK3AO75631 287 aa4.32□□□□□ -1.72
PRKD3-210ENST00000494667 AGR2O95994 175 aa4.32□□□□□ -1.72
PRKD3-210ENST00000494667 CLTBP09497 229 aa4.32□□□□□ -1.72
PRKD3-210ENST00000494667 TMIGD3P0DMS9 266 aaPredicted RBP4.32□□□□□ -1.72
PRKD3-210ENST00000494667 NR2F1P10589 423 aa4.32□□□□□ -1.72
PRKD3-210ENST00000494667 C6P13671 934 aa4.32□□□□□ -1.72
PRKD3-210ENST00000494667 ZNF25P17030 456 aaPredicted RBP4.32□□□□□ -1.72
PRKD3-210ENST00000494667 EDNRAP25101 427 aa4.32□□□□□ -1.72
PRKD3-210ENST00000494667 MANFP55145 182 aaKnown RBP4.32□□□□□ -1.72
PRKD3-210ENST00000494667 TWF1Q12792 350 aa4.32□□□□□ -1.72
PRKD3-210ENST00000494667 SLBPQ14493 270 aaKnown RBP eCLIP4.32□□□□□ -1.72
PRKD3-210ENST00000494667 C21orf62-AS1Q17RA5 79 aa4.32□□□□□ -1.72
PRKD3-210ENST00000494667 GGNBP1Q5YKI7 109 aa4.32□□□□□ -1.72
PRKD3-210ENST00000494667 TANGO2Q6ICL3 276 aa4.32□□□□□ -1.72
PRKD3-210ENST00000494667 ZNF585AQ6P3V2 769 aa4.32□□□□□ -1.72
PRKD3-210ENST00000494667 Q6ZRG5 221 aa4.32□□□□□ -1.72
PRKD3-210ENST00000494667 CENPVQ7Z7K6 275 aaPredicted RBP4.32□□□□□ -1.72
PRKD3-210ENST00000494667 HOGA1Q86XE5 327 aa4.32□□□□□ -1.72
PRKD3-210ENST00000494667 ETFBKMTQ8IXQ9 262 aa4.32□□□□□ -1.72
PRKD3-210ENST00000494667 DTWD2Q8NBA8 298 aa4.32□□□□□ -1.72
PRKD3-210ENST00000494667 OR9K2Q8NGE7 335 aa4.32□□□□□ -1.72
PRKD3-210ENST00000494667 SUSD6Q92537 303 aa4.32□□□□□ -1.72
PRKD3-210ENST00000494667 TIFAQ96CG3 184 aa4.32□□□□□ -1.72
PRKD3-210ENST00000494667 ALG14Q96F25 216 aa4.32□□□□□ -1.72
PRKD3-210ENST00000494667 POM121Q96HA1 1249 aa4.32□□□□□ -1.72
PRKD3-210ENST00000494667 AMDHD1Q96NU7 426 aa4.32□□□□□ -1.72
PRKD3-210ENST00000494667 GPX7Q96SL4 187 aaPredicted RBP4.32□□□□□ -1.72
PRKD3-210ENST00000494667 LGR4Q9BXB1 951 aa4.32□□□□□ -1.72
PRKD3-210ENST00000494667 CST11Q9H112 138 aa4.32□□□□□ -1.72
PRKD3-210ENST00000494667 SLC26A1Q9H2B4 701 aa4.32□□□□□ -1.72
PRKD3-210ENST00000494667 SERGEFQ9UGK8 458 aa4.32□□□□□ -1.72
PRKD3-210ENST00000494667 TUBD1Q9UJT1 453 aa4.32□□□□□ -1.72
PRKD3-210ENST00000494667 PLXND1Q9Y4D7 1925 aa4.32□□□□□ -1.72
PRKD3-210ENST00000494667 ZNF264O43296 627 aa4.32□□□□□ -1.72
PRKD3-210ENST00000494667 CH25HO95992 272 aa4.32□□□□□ -1.72
PRKD3-210ENST00000494667 CATP04040 527 aaKnown RBP4.32□□□□□ -1.72
PRKD3-210ENST00000494667 MMP3P08254 477 aa4.32□□□□□ -1.72
PRKD3-210ENST00000494667 ZNF286BP0CG31 522 aa4.32□□□□□ -1.72
PRKD3-210ENST00000494667 RPS12P25398 132 aaKnown RBP4.32□□□□□ -1.72
PRKD3-210ENST00000494667 SLC25A1P53007 311 aa4.32□□□□□ -1.72
PRKD3-210ENST00000494667 H3F3AP84243 136 aa4.32□□□□□ -1.72
PRKD3-210ENST00000494667 OR7A5Q15622 319 aa4.32□□□□□ -1.72
PRKD3-210ENST00000494667 TPRG1Q6ZUI0 275 aa4.32□□□□□ -1.72
PRKD3-210ENST00000494667 TMEM150AQ86TG1 271 aa4.32□□□□□ -1.72
PRKD3-210ENST00000494667 TGIF2LYQ8IUE0 185 aa4.32□□□□□ -1.72
PRKD3-210ENST00000494667 TMEM255BQ8WV15 326 aa4.32□□□□□ -1.72
PRKD3-210ENST00000494667 TMEM40Q8WWA1 233 aa4.32□□□□□ -1.72
PRKD3-210ENST00000494667 FGF13Q92913 245 aa4.32□□□□□ -1.72
PRKD3-210ENST00000494667 RAB8BQ92930 207 aa4.32□□□□□ -1.72
PRKD3-210ENST00000494667 HLA-CQ95604 372 aa4.32□□□□□ -1.72
PRKD3-210ENST00000494667 GJD4Q96KN9 370 aaPredicted RBP4.32□□□□□ -1.72
PRKD3-210ENST00000494667 C2orf50Q96LR7 162 aa4.32□□□□□ -1.72
PRKD3-210ENST00000494667 MS4A8Q9BY19 250 aa4.32□□□□□ -1.72
PRKD3-210ENST00000494667 KLHL28Q9NXS3 571 aa4.32□□□□□ -1.72
PRKD3-210ENST00000494667 CLDND1Q9NY35 253 aa4.32□□□□□ -1.72
PRKD3-210ENST00000494667 OR5AC2Q9NZP5 309 aa4.32□□□□□ -1.72
PRKD3-210ENST00000494667 SLC23A2Q9UGH3 650 aa4.32□□□□□ -1.72
PRKD3-210ENST00000494667 DKKL1Q9UK85 242 aa4.32□□□□□ -1.72
PRKD3-210ENST00000494667 GPR55Q9Y2T6 319 aaPredicted RBP4.32□□□□□ -1.72
PRKD3-210ENST00000494667 VWA8A3KMH1 1905 aa4.32□□□□□ -1.72
PRKD3-210ENST00000494667 ZC3H12DA2A288 527 aaKnown RBP4.32□□□□□ -1.72
PRKD3-210ENST00000494667 MSGN1A6NI15 193 aa4.32□□□□□ -1.72
PRKD3-210ENST00000494667 DCTN6O00399 190 aa4.32□□□□□ -1.72
PRKD3-210ENST00000494667 PLPP1O14494 284 aa4.32□□□□□ -1.72
PRKD3-210ENST00000494667 HSD17B6O14756 317 aa4.32□□□□□ -1.72
PRKD3-210ENST00000494667 ARPC3O15145 178 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms