RNA–Protein interactions for RNA: ENST00000494395.1

ITGB1-217, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 562 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-217ENST00000494395 NUAK2Q9H093 628 aa7.56□□□□□ -1.2
ITGB1-217ENST00000494395 WNT5BQ9H1J7 359 aa7.56□□□□□ -1.2
ITGB1-217ENST00000494395 NTN4Q9HB63 628 aa7.56□□□□□ -1.2
ITGB1-217ENST00000494395 LOC100509620A0A075B734 347 aa7.55□□□□□ -1.2
ITGB1-217ENST00000494395 A0A1W2PPL8 197 aa7.55□□□□□ -1.2
ITGB1-217ENST00000494395 OR6C68A6NDL8 312 aa7.55□□□□□ -1.2
ITGB1-217ENST00000494395 GPRIN2O60269 458 aa7.55□□□□□ -1.2
ITGB1-217ENST00000494395 SLC16A7O60669 478 aa7.55□□□□□ -1.2
ITGB1-217ENST00000494395 SOX14O95416 240 aa7.55□□□□□ -1.2
ITGB1-217ENST00000494395 IGHV4-39P01824 125 aa7.55□□□□□ -1.2
ITGB1-217ENST00000494395 GSTM3P21266 225 aa7.55□□□□□ -1.2
ITGB1-217ENST00000494395 LAP3P28838 519 aa7.55□□□□□ -1.2
ITGB1-217ENST00000494395 THBS4P35443 961 aa7.55□□□□□ -1.2
ITGB1-217ENST00000494395 PSG4Q00888 419 aa7.55□□□□□ -1.2
ITGB1-217ENST00000494395 SNTB2Q13425 540 aaKnown RBP7.55□□□□□ -1.2
ITGB1-217ENST00000494395 DAG1Q14118 895 aa7.55□□□□□ -1.2
ITGB1-217ENST00000494395 EFNB3Q15768 340 aa7.55□□□□□ -1.2
ITGB1-217ENST00000494395 PABPC1L2AQ5JQF8 200 aa7.55□□□□□ -1.2
ITGB1-217ENST00000494395 Q5PR19 223 aa7.55□□□□□ -1.2
ITGB1-217ENST00000494395 KRT80Q6KB66 452 aa7.55□□□□□ -1.2
ITGB1-217ENST00000494395 TMEM53Q6P2H8 277 aa7.55□□□□□ -1.2
ITGB1-217ENST00000494395 LEG1Q6P5S2 330 aa7.55□□□□□ -1.2
ITGB1-217ENST00000494395 UGT2A3Q6UWM9 527 aa7.55□□□□□ -1.2
ITGB1-217ENST00000494395 ZBTB46Q86UZ6 589 aa7.55□□□□□ -1.2
ITGB1-217ENST00000494395 OR6V1Q8N148 313 aa7.55□□□□□ -1.2
ITGB1-217ENST00000494395 OR4Q3Q8NH05 313 aa7.55□□□□□ -1.2
ITGB1-217ENST00000494395 OR4K13Q8NH42 304 aa7.55□□□□□ -1.2
ITGB1-217ENST00000494395 POM121L2Q96KW2 1035 aa7.55□□□□□ -1.2
ITGB1-217ENST00000494395 FOXN4Q96NZ1 517 aa7.55□□□□□ -1.2
ITGB1-217ENST00000494395 NMNAT3Q96T66 252 aa7.55□□□□□ -1.2
ITGB1-217ENST00000494395 WACQ9BTA9 647 aa7.55□□□□□ -1.2
ITGB1-217ENST00000494395 ZNF416Q9BWM5 594 aa7.55□□□□□ -1.2
ITGB1-217ENST00000494395 CACNG6Q9BXT2 260 aa7.55□□□□□ -1.2
ITGB1-217ENST00000494395 OR2H1Q9GZK4 316 aa7.55□□□□□ -1.2
ITGB1-217ENST00000494395 RACGAP1Q9H0H5 632 aa7.55□□□□□ -1.2
ITGB1-217ENST00000494395 C1orf198Q9H425 327 aa7.55□□□□□ -1.2
ITGB1-217ENST00000494395 PLK3Q9H4B4 646 aa7.55□□□□□ -1.2
ITGB1-217ENST00000494395 EMC7Q9NPA0 242 aa7.55□□□□□ -1.2
ITGB1-217ENST00000494395 ARMC1Q9NVT9 282 aa7.55□□□□□ -1.2
ITGB1-217ENST00000494395 DNAJB9Q9UBS3 223 aa7.55□□□□□ -1.2
ITGB1-217ENST00000494395 COA3Q9Y2R0 106 aaPredicted RBP7.55□□□□□ -1.2
ITGB1-217ENST00000494395 CR1P17927 2039 aa7.54□□□□□ -1.2
ITGB1-217ENST00000494395 KHDRBS3O75525 346 aaKnown RBP7.54□□□□□ -1.2
ITGB1-217ENST00000494395 TIPRLO75663 272 aa7.54□□□□□ -1.2
ITGB1-217ENST00000494395 MPZL1O95297 269 aa7.54□□□□□ -1.2
ITGB1-217ENST00000494395 GPANK1O95872 356 aa7.54□□□□□ -1.2
ITGB1-217ENST00000494395 PTHP01270 115 aa7.54□□□□□ -1.2
ITGB1-217ENST00000494395 OR4A8P0C604 315 aa7.54□□□□□ -1.2
ITGB1-217ENST00000494395 CCL2P13500 99 aa7.54□□□□□ -1.2
ITGB1-217ENST00000494395 PRKACGP22612 351 aa7.54□□□□□ -1.2
ITGB1-217ENST00000494395 APEX1P27695 318 aaKnown RBP7.54□□□□□ -1.2
ITGB1-217ENST00000494395 CRABP1P29762 137 aa7.54□□□□□ -1.2
ITGB1-217ENST00000494395 GLRXP35754 106 aa7.54□□□□□ -1.2
ITGB1-217ENST00000494395 SERPINF1P36955 418 aa7.54□□□□□ -1.2
ITGB1-217ENST00000494395 GSK3AP49840 483 aa7.54□□□□□ -1.2
ITGB1-217ENST00000494395 ATP5J2P56134 94 aa7.54□□□□□ -1.2
ITGB1-217ENST00000494395 LSM6P62312 80 aaKnown RBP7.54□□□□□ -1.2
ITGB1-217ENST00000494395 HIST1H3AP68431 136 aa7.54□□□□□ -1.2
ITGB1-217ENST00000494395 KHDRBS1Q07666 443 aaKnown RBP eCLIP7.54□□□□□ -1.2
ITGB1-217ENST00000494395 COX10Q12887 443 aa7.54□□□□□ -1.2
ITGB1-217ENST00000494395 AQP6Q13520 282 aa7.54□□□□□ -1.2
ITGB1-217ENST00000494395 CLEC12AQ5QGZ9 265 aa7.54□□□□□ -1.2
ITGB1-217ENST00000494395 SLC35F1Q5T1Q4 408 aa7.54□□□□□ -1.2
ITGB1-217ENST00000494395 HIST2H3PS2Q5TEC6 136 aa7.54□□□□□ -1.2
ITGB1-217ENST00000494395 OTPQ5XKR4 325 aa7.54□□□□□ -1.2
ITGB1-217ENST00000494395 HIST2H3AQ71DI3 136 aa7.54□□□□□ -1.2
ITGB1-217ENST00000494395 YTHDF3Q7Z739 585 aaKnown RBP7.54□□□□□ -1.2
ITGB1-217ENST00000494395 GLB1L2Q8IW92 636 aa7.54□□□□□ -1.2
ITGB1-217ENST00000494395 SLC30A7Q8NEW0 376 aa7.54□□□□□ -1.2
ITGB1-217ENST00000494395 SDR9C7Q8NEX9 313 aa7.54□□□□□ -1.2
ITGB1-217ENST00000494395 SLC26A10Q8NG04 563 aa7.54□□□□□ -1.2
ITGB1-217ENST00000494395 OR52L1Q8NGH7 329 aa7.54□□□□□ -1.2
ITGB1-217ENST00000494395 OR52E2Q8NGJ4 325 aa7.54□□□□□ -1.2
ITGB1-217ENST00000494395 AKR7LQ8NHP1 331 aa7.54□□□□□ -1.2
ITGB1-217ENST00000494395 ZNRF4Q8WWF5 429 aa7.54□□□□□ -1.2
ITGB1-217ENST00000494395 PPP1R14AQ96A00 147 aa7.54□□□□□ -1.2
ITGB1-217ENST00000494395 MRPL24Q96A35 216 aaKnown RBP7.54□□□□□ -1.2
ITGB1-217ENST00000494395 TRMT61AQ96FX7 289 aaKnown RBP7.54□□□□□ -1.2
ITGB1-217ENST00000494395 DOK1Q99704 481 aa7.54□□□□□ -1.2
ITGB1-217ENST00000494395 TSSK6Q9BXA6 273 aa7.54□□□□□ -1.2
ITGB1-217ENST00000494395 NMNAT2Q9BZQ4 307 aa7.54□□□□□ -1.2
ITGB1-217ENST00000494395 FN3KQ9H479 309 aa7.54□□□□□ -1.2
ITGB1-217ENST00000494395 YY1AP1Q9H869 796 aa7.54□□□□□ -1.2
ITGB1-217ENST00000494395 RNF121Q9H920 327 aa7.54□□□□□ -1.2
ITGB1-217ENST00000494395 CCNB1IP1Q9NPC3 277 aa7.54□□□□□ -1.2
ITGB1-217ENST00000494395 TBC1D23Q9NUY8 699 aa7.54□□□□□ -1.2
ITGB1-217ENST00000494395 PDP1Q9P0J1 537 aaPredicted RBP7.54□□□□□ -1.2
ITGB1-217ENST00000494395 B9D1Q9UPM9 204 aa7.54□□□□□ -1.2
ITGB1-217ENST00000494395 FKBP7Q9Y680 259 aa7.54□□□□□ -1.2
ITGB1-217ENST00000494395 YLPM1P49750 1951 aaKnown RBP7.53□□□□□ -1.2
ITGB1-217ENST00000494395 IQCMA0A1B0GVH7 501 aa7.53□□□□□ -1.2
ITGB1-217ENST00000494395 C12orf71A8MTZ7 269 aa7.53□□□□□ -1.2
ITGB1-217ENST00000494395 B9A039 149 aa7.53□□□□□ -1.2
ITGB1-217ENST00000494395 SYNGR3O43761 229 aa7.53□□□□□ -1.2
ITGB1-217ENST00000494395 RENP00797 406 aa7.53□□□□□ -1.2
ITGB1-217ENST00000494395 TFP02787 698 aa7.53□□□□□ -1.2
ITGB1-217ENST00000494395 COX5BP10606 129 aa7.53□□□□□ -1.2
ITGB1-217ENST00000494395 ZNF250P15622 560 aa7.53□□□□□ -1.2
ITGB1-217ENST00000494395 STOMP27105 288 aa7.53□□□□□ -1.2
ITGB1-217ENST00000494395 PCSK6P29122 969 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms