RNA–Protein interactions for RNA: ENST00000493957.5

UBA3-211, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 3

Gene UBA3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-211ENST00000493957 GINS1Q14691 196 aa10.04□□□□□ -0.8
UBA3-211ENST00000493957 SWI5Q1ZZU3 235 aa10.04□□□□□ -0.8
UBA3-211ENST00000493957 CCDC92Q53HC0 331 aaPredicted RBP10.04□□□□□ -0.8
UBA3-211ENST00000493957 AGAP6Q5VW22 663 aa10.04□□□□□ -0.8
UBA3-211ENST00000493957 CORO6Q6QEF8 472 aa10.04□□□□□ -0.8
UBA3-211ENST00000493957 SPNS3Q6ZMD2 512 aa10.04□□□□□ -0.8
UBA3-211ENST00000493957 ZBTB46Q86UZ6 589 aa10.04□□□□□ -0.8
UBA3-211ENST00000493957 LRP11Q86VZ4 500 aa10.04□□□□□ -0.8
UBA3-211ENST00000493957 LINC00346Q8IVM7 164 aa10.04□□□□□ -0.8
UBA3-211ENST00000493957 SVOPLQ8N434 492 aa10.04□□□□□ -0.8
UBA3-211ENST00000493957 SLC26A10Q8NG04 563 aa10.04□□□□□ -0.8
UBA3-211ENST00000493957 OR2T33Q8NG76 320 aa10.04□□□□□ -0.8
UBA3-211ENST00000493957 SLC7A6Q92536 515 aa10.04□□□□□ -0.8
UBA3-211ENST00000493957 NRBF2Q96F24 287 aa10.04□□□□□ -0.8
UBA3-211ENST00000493957 POM121L2Q96KW2 1035 aa10.04□□□□□ -0.8
UBA3-211ENST00000493957 RBM4Q9BWF3 364 aaKnown RBP10.04□□□□□ -0.8
UBA3-211ENST00000493957 NMNAT2Q9BZQ4 307 aa10.04□□□□□ -0.8
UBA3-211ENST00000493957 RACGAP1Q9H0H5 632 aa10.04□□□□□ -0.8
UBA3-211ENST00000493957 KCNN2Q9H2S1 579 aa10.04□□□□□ -0.8
UBA3-211ENST00000493957 CXorf56Q9H5V9 222 aa10.04□□□□□ -0.8
UBA3-211ENST00000493957 CDH20Q9HBT6 801 aa10.04□□□□□ -0.8
UBA3-211ENST00000493957 FAIMQ9NVQ4 179 aa10.04□□□□□ -0.8
UBA3-211ENST00000493957 KIF17Q9P2E2 1029 aa10.04□□□□□ -0.8
UBA3-211ENST00000493957 MYEF2Q9P2K5 600 aaKnown RBP10.04□□□□□ -0.8
UBA3-211ENST00000493957 ASH2LQ9UBL3 628 aa10.04□□□□□ -0.8
UBA3-211ENST00000493957 FKBP7Q9Y680 259 aa10.04□□□□□ -0.8
UBA3-211ENST00000493957 C5orf49A4QMS7 147 aa10.03□□□□□ -0.8
UBA3-211ENST00000493957 SAC3D1A6NKF1 404 aa10.03□□□□□ -0.8
UBA3-211ENST00000493957 C12orf71A8MTZ7 269 aa10.03□□□□□ -0.8
UBA3-211ENST00000493957 ANKRD65E5RJM6 399 aa10.03□□□□□ -0.8
UBA3-211ENST00000493957 RER1O15258 196 aa10.03□□□□□ -0.8
UBA3-211ENST00000493957 DOK2O60496 412 aa10.03□□□□□ -0.8
UBA3-211ENST00000493957 LY6HO94772 140 aa10.03□□□□□ -0.8
UBA3-211ENST00000493957 ANXA8P13928 327 aa10.03□□□□□ -0.8
UBA3-211ENST00000493957 PAX1P15863 534 aa10.03□□□□□ -0.8
UBA3-211ENST00000493957 CCNOP22674 350 aa10.03□□□□□ -0.8
UBA3-211ENST00000493957 STOMP27105 288 aa10.03□□□□□ -0.8
UBA3-211ENST00000493957 EPHA2P29317 976 aa10.03□□□□□ -0.8
UBA3-211ENST00000493957 GRK5P34947 590 aa10.03□□□□□ -0.8
UBA3-211ENST00000493957 APLNRP35414 380 aa10.03□□□□□ -0.8
UBA3-211ENST00000493957 SERPINF1P36955 418 aa10.03□□□□□ -0.8
UBA3-211ENST00000493957 GUCA1AP43080 201 aaPredicted RBP10.03□□□□□ -0.8
UBA3-211ENST00000493957 CDK5Q00535 292 aa10.03□□□□□ -0.8
UBA3-211ENST00000493957 TEKQ02763 1124 aa10.03□□□□□ -0.8
UBA3-211ENST00000493957 PLP2Q04941 152 aa10.03□□□□□ -0.8
UBA3-211ENST00000493957 AQP6Q13520 282 aa10.03□□□□□ -0.8
UBA3-211ENST00000493957 KCNMB1Q16558 191 aa10.03□□□□□ -0.8
UBA3-211ENST00000493957 TBC1D28Q2M2D7 210 aa10.03□□□□□ -0.8
UBA3-211ENST00000493957 TMEM255AQ5JRV8 349 aa10.03□□□□□ -0.8
UBA3-211ENST00000493957 DNM1P34Q6PK57 102 aa10.03□□□□□ -0.8
UBA3-211ENST00000493957 RFPL4BQ6ZWI9 263 aa10.03□□□□□ -0.8
UBA3-211ENST00000493957 VASH1Q7L8A9 365 aaPredicted RBP10.03□□□□□ -0.8
UBA3-211ENST00000493957 YTHDF3Q7Z739 585 aaKnown RBP10.03□□□□□ -0.8
UBA3-211ENST00000493957 LURAP1LQ8IV03 231 aa10.03□□□□□ -0.8
UBA3-211ENST00000493957 ZNF101Q8IZC7 436 aa10.03□□□□□ -0.8
UBA3-211ENST00000493957 LRRC75A-AS1Q8N1F1 130 aa10.03□□□□□ -0.8
UBA3-211ENST00000493957 ICA1LQ8NDH6 482 aa10.03□□□□□ -0.8
UBA3-211ENST00000493957 IL17RDQ8NFM7 739 aa10.03□□□□□ -0.8
UBA3-211ENST00000493957 SYT3Q9BQG1 590 aa10.03□□□□□ -0.8
UBA3-211ENST00000493957 MRPL37Q9BZE1 423 aaKnown RBP10.03□□□□□ -0.8
UBA3-211ENST00000493957 GABARAPL1Q9H0R8 117 aa10.03□□□□□ -0.8
UBA3-211ENST00000493957 ZNF442Q9H7R0 627 aa10.03□□□□□ -0.8
UBA3-211ENST00000493957 ZNF556Q9HAH1 456 aa10.03□□□□□ -0.8
UBA3-211ENST00000493957 CMC2Q9NRP2 79 aa10.03□□□□□ -0.8
UBA3-211ENST00000493957 KLHL21Q9UJP4 597 aa10.03□□□□□ -0.8
UBA3-211ENST00000493957 FBXL3Q9UKT7 428 aa10.03□□□□□ -0.8
UBA3-211ENST00000493957 OAZ3Q9UMX2 235 aa10.03□□□□□ -0.8
UBA3-211ENST00000493957 BAIAP2Q9UQB8 552 aa10.03□□□□□ -0.8
UBA3-211ENST00000493957 POLR1DQ9Y2S0 133 aa10.03□□□□□ -0.8
UBA3-211ENST00000493957 TIMM10BQ9Y5J6 103 aa10.03□□□□□ -0.8
UBA3-211ENST00000493957 TANC2Q9HCD6 1990 aa10.03□□□□□ -0.8
UBA3-211ENST00000493957 ZANQ9Y493 2812 aa10.02□□□□□ -0.8
UBA3-211ENST00000493957 G3V2T6 193 aa10.02□□□□□ -0.81
UBA3-211ENST00000493957 M0R129 80 aa10.02□□□□□ -0.81
UBA3-211ENST00000493957 SGCEO43556 437 aa10.02□□□□□ -0.81
UBA3-211ENST00000493957 SYNGR3O43761 229 aa10.02□□□□□ -0.81
UBA3-211ENST00000493957 SNAP29O95721 258 aa10.02□□□□□ -0.81
UBA3-211ENST00000493957 CLPTM1O96005 669 aa10.02□□□□□ -0.81
UBA3-211ENST00000493957 DBHP09172 617 aa10.02□□□□□ -0.81
UBA3-211ENST00000493957 SPI1P17947 270 aa10.02□□□□□ -0.81
UBA3-211ENST00000493957 HTR5AP47898 357 aa10.02□□□□□ -0.81
UBA3-211ENST00000493957 PCBD1P61457 104 aa10.02□□□□□ -0.81
UBA3-211ENST00000493957 LSM6P62312 80 aaKnown RBP10.02□□□□□ -0.81
UBA3-211ENST00000493957 GALK2Q01415 458 aa10.02□□□□□ -0.81
UBA3-211ENST00000493957 SPATA46Q5T0L3 261 aa10.02□□□□□ -0.81
UBA3-211ENST00000493957 SLC18B1Q6NT16 456 aa10.02□□□□□ -0.81
UBA3-211ENST00000493957 SLC27A4Q6P1M0 643 aa10.02□□□□□ -0.81
UBA3-211ENST00000493957 CFAP77Q6ZQR2 320 aa10.02□□□□□ -0.81
UBA3-211ENST00000493957 HIPK1Q86Z02 1210 aa10.02□□□□□ -0.81
UBA3-211ENST00000493957 ZCCHC24Q8N2G6 241 aaKnown RBP10.02□□□□□ -0.81
UBA3-211ENST00000493957 ZNF511Q8NB15 262 aa10.02□□□□□ -0.81
UBA3-211ENST00000493957 PROKR2Q8NFJ6 384 aa10.02□□□□□ -0.81
UBA3-211ENST00000493957 BDH2Q9BUT1 245 aa10.02□□□□□ -0.81
UBA3-211ENST00000493957 GRIP2Q9C0E4 1043 aa10.02□□□□□ -0.81
UBA3-211ENST00000493957 POFUT1Q9H488 388 aa10.02□□□□□ -0.81
UBA3-211ENST00000493957 WDR76Q9H967 626 aa10.02□□□□□ -0.81
UBA3-211ENST00000493957 SLC25A19Q9HC21 320 aa10.02□□□□□ -0.81
UBA3-211ENST00000493957 PAPOLBQ9NRJ5 636 aaKnown RBP10.02□□□□□ -0.81
UBA3-211ENST00000493957 TMEFF2Q9UIK5 374 aaPredicted RBP10.02□□□□□ -0.81
UBA3-211ENST00000493957 OR6C6A6NF89 314 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms