RNA–Protein interactions for RNA: ENST00000493923.1

HDAC6-234, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 404 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-234ENST00000493923 IFNA10P01566 189 aa7.29□□□□□ -1.24
HDAC6-234ENST00000493923 IL2RAP01589 272 aa7.29□□□□□ -1.24
HDAC6-234ENST00000493923 UBBP0CG47 229 aa7.29□□□□□ -1.24
HDAC6-234ENST00000493923 UBCP0CG48 685 aaKnown RBP7.29□□□□□ -1.24
HDAC6-234ENST00000493923 TMIGD3P0DMS9 266 aaPredicted RBP7.29□□□□□ -1.24
HDAC6-234ENST00000493923 CPN1P15169 458 aa7.29□□□□□ -1.24
HDAC6-234ENST00000493923 RHCEP18577 417 aa7.29□□□□□ -1.24
HDAC6-234ENST00000493923 PPIBP23284 216 aaKnown RBP7.29□□□□□ -1.24
HDAC6-234ENST00000493923 CTSSP25774 331 aa7.29□□□□□ -1.24
HDAC6-234ENST00000493923 SRD5A2P31213 254 aa7.29□□□□□ -1.24
HDAC6-234ENST00000493923 NCBP2P52298 156 aaKnown RBP eCLIP7.29□□□□□ -1.24
HDAC6-234ENST00000493923 CAPZA1P52907 286 aa7.29□□□□□ -1.24
HDAC6-234ENST00000493923 NUDT6P53370 316 aa7.29□□□□□ -1.24
HDAC6-234ENST00000493923 SUCLG1P53597 346 aaKnown RBP7.29□□□□□ -1.24
HDAC6-234ENST00000493923 CD81P60033 236 aa7.29□□□□□ -1.24
HDAC6-234ENST00000493923 RPS27AP62979 156 aaKnown RBP7.29□□□□□ -1.24
HDAC6-234ENST00000493923 UBA52P62987 128 aaKnown RBP7.29□□□□□ -1.24
HDAC6-234ENST00000493923 PITPNAQ00169 270 aa7.29□□□□□ -1.24
HDAC6-234ENST00000493923 DEFA6Q01524 100 aa7.29□□□□□ -1.24
HDAC6-234ENST00000493923 GAB1Q13480 694 aa7.29□□□□□ -1.24
HDAC6-234ENST00000493923 VEZF1Q14119 521 aa7.29□□□□□ -1.24
HDAC6-234ENST00000493923 GPR176Q14439 515 aa7.29□□□□□ -1.24
HDAC6-234ENST00000493923 KIAA0040Q15053 153 aa7.29□□□□□ -1.24
HDAC6-234ENST00000493923 BCL2L15Q5TBC7 163 aa7.29□□□□□ -1.24
HDAC6-234ENST00000493923 ANKRD34AQ69YU3 496 aa7.29□□□□□ -1.24
HDAC6-234ENST00000493923 SEZ6L2Q6UXD5 910 aa7.29□□□□□ -1.24
HDAC6-234ENST00000493923 CBLL1Q75N03 491 aa7.29□□□□□ -1.24
HDAC6-234ENST00000493923 BTN2A1Q7KYR7 527 aa7.29□□□□□ -1.24
HDAC6-234ENST00000493923 NLRC3Q7RTR2 1065 aa7.29□□□□□ -1.24
HDAC6-234ENST00000493923 ZNF551Q7Z340 670 aaPredicted RBP7.29□□□□□ -1.24
HDAC6-234ENST00000493923 TRIM46Q7Z4K8 759 aa7.29□□□□□ -1.24
HDAC6-234ENST00000493923 MARCH3Q86UD3 253 aa7.29□□□□□ -1.24
HDAC6-234ENST00000493923 LRRC28Q86X40 367 aaPredicted RBP7.29□□□□□ -1.24
HDAC6-234ENST00000493923 CMIPQ8IY22 773 aa7.29□□□□□ -1.24
HDAC6-234ENST00000493923 FADS6Q8N9I5 356 aa7.29□□□□□ -1.24
HDAC6-234ENST00000493923 FAM71CQ8NEG0 241 aa7.29□□□□□ -1.24
HDAC6-234ENST00000493923 MOSPD2Q8NHP6 518 aa7.29□□□□□ -1.24
HDAC6-234ENST00000493923 ZPLD1Q8TCW7 415 aa7.29□□□□□ -1.24
HDAC6-234ENST00000493923 GLYATL2Q8WU03 294 aa7.29□□□□□ -1.24
HDAC6-234ENST00000493923 GTF3AQ92664 365 aaKnown RBP7.29□□□□□ -1.24
HDAC6-234ENST00000493923 MRPS24Q96EL2 167 aaKnown RBP7.29□□□□□ -1.24
HDAC6-234ENST00000493923 AMDHD1Q96NU7 426 aa7.29□□□□□ -1.24
HDAC6-234ENST00000493923 OCSTAMPQ9BR26 566 aa7.29□□□□□ -1.24
HDAC6-234ENST00000493923 INPP5KQ9BT40 448 aa7.29□□□□□ -1.24
HDAC6-234ENST00000493923 IFT27Q9BW83 186 aa7.29□□□□□ -1.24
HDAC6-234ENST00000493923 TINAGL1Q9GZM7 467 aaPredicted RBP7.29□□□□□ -1.24
HDAC6-234ENST00000493923 ALX4Q9H161 411 aaPredicted RBP7.29□□□□□ -1.24
HDAC6-234ENST00000493923 PIGMQ9H3S5 423 aa7.29□□□□□ -1.24
HDAC6-234ENST00000493923 GSX1Q9H4S2 264 aaPredicted RBP7.29□□□□□ -1.24
HDAC6-234ENST00000493923 EVA1AQ9H8M9 152 aa7.29□□□□□ -1.24
HDAC6-234ENST00000493923 CALHM2Q9HA72 323 aa7.29□□□□□ -1.24
HDAC6-234ENST00000493923 TCF7L1Q9HCS4 588 aa7.29□□□□□ -1.24
HDAC6-234ENST00000493923 FBXO34Q9NWN3 711 aa7.29□□□□□ -1.24
HDAC6-234ENST00000493923 VNN3Q9NY84 501 aa7.29□□□□□ -1.24
HDAC6-234ENST00000493923 SLCO1C1Q9NYB5 712 aa7.29□□□□□ -1.24
HDAC6-234ENST00000493923 ZNF226Q9NYT6 803 aa7.29□□□□□ -1.24
HDAC6-234ENST00000493923 TAS2R10Q9NYW0 307 aa7.29□□□□□ -1.24
HDAC6-234ENST00000493923 VAPAQ9P0L0 249 aa7.29□□□□□ -1.24
HDAC6-234ENST00000493923 PRODH2Q9UF12 536 aa7.29□□□□□ -1.24
HDAC6-234ENST00000493923 ST6GALNAC2Q9UJ37 374 aa7.29□□□□□ -1.24
HDAC6-234ENST00000493923 CADP27708 2225 aa7.29□□□□□ -1.24
HDAC6-234ENST00000493923 DNHD1Q96M86 4753 aa7.28□□□□□ -1.24
HDAC6-234ENST00000493923 TNFSF12-TNFSF13A0A0A6YY99 330 aa7.28□□□□□ -1.24
HDAC6-234ENST00000493923 C5orf58C9J3I9 102 aa7.28□□□□□ -1.24
HDAC6-234ENST00000493923 C9JVG2 144 aa7.28□□□□□ -1.24
HDAC6-234ENST00000493923 PRR23D1E9PI22 279 aaPredicted RBP7.28□□□□□ -1.24
HDAC6-234ENST00000493923 NPIPB8E9PQR5 432 aa7.28□□□□□ -1.24
HDAC6-234ENST00000493923 UBE2CO00762 179 aa7.28□□□□□ -1.24
HDAC6-234ENST00000493923 CASKO14936 926 aa7.28□□□□□ -1.24
HDAC6-234ENST00000493923 HCRTR2O43614 444 aa7.28□□□□□ -1.24
HDAC6-234ENST00000493923 GMFGO60234 142 aa7.28□□□□□ -1.24
HDAC6-234ENST00000493923 HPGDSO60760 199 aa7.28□□□□□ -1.24
HDAC6-234ENST00000493923 EIF3GO75821 320 aaKnown RBP eCLIP7.28□□□□□ -1.24
HDAC6-234ENST00000493923 CBR3O75828 277 aa7.28□□□□□ -1.24
HDAC6-234ENST00000493923 TNFSF13O75888 250 aa7.28□□□□□ -1.24
HDAC6-234ENST00000493923 ACTL6AO96019 429 aa7.28□□□□□ -1.24
HDAC6-234ENST00000493923 SERPINA3P01011 423 aa7.28□□□□□ -1.24
HDAC6-234ENST00000493923 IGHV2-70P01814 119 aa7.28□□□□□ -1.24
HDAC6-234ENST00000493923 GLAP06280 429 aa7.28□□□□□ -1.24
HDAC6-234ENST00000493923 PRR23D2P0DMB1 279 aaPredicted RBP7.28□□□□□ -1.24
HDAC6-234ENST00000493923 G6PDP11413 515 aa7.28□□□□□ -1.24
HDAC6-234ENST00000493923 SELLP14151 372 aa7.28□□□□□ -1.24
HDAC6-234ENST00000493923 ZNF708P17019 499 aa7.28□□□□□ -1.24
HDAC6-234ENST00000493923 PAICSP22234 425 aaKnown RBP7.28□□□□□ -1.24
HDAC6-234ENST00000493923 DPP4P27487 766 aa7.28□□□□□ -1.24
HDAC6-234ENST00000493923 APEX1P27695 318 aaKnown RBP7.28□□□□□ -1.24
HDAC6-234ENST00000493923 S100A11P31949 105 aa7.28□□□□□ -1.24
HDAC6-234ENST00000493923 IDH2P48735 452 aaKnown RBP7.28□□□□□ -1.24
HDAC6-234ENST00000493923 RNF144AP50876 292 aaPredicted RBP7.28□□□□□ -1.24
HDAC6-234ENST00000493923 GZMMP51124 257 aa7.28□□□□□ -1.24
HDAC6-234ENST00000493923 GMFBP60983 142 aa7.28□□□□□ -1.24
HDAC6-234ENST00000493923 SPCS3P61009 180 aa7.28□□□□□ -1.24
HDAC6-234ENST00000493923 DCAF7P61962 342 aa7.28□□□□□ -1.24
HDAC6-234ENST00000493923 DEFA5Q01523 94 aa7.28□□□□□ -1.24
HDAC6-234ENST00000493923 SMCO1Q147U7 214 aa7.28□□□□□ -1.24
HDAC6-234ENST00000493923 DAZAP2Q15038 168 aaPredicted RBP7.28□□□□□ -1.24
HDAC6-234ENST00000493923 PON3Q15166 354 aa7.28□□□□□ -1.24
HDAC6-234ENST00000493923 FAM69AQ5T7M9 428 aa7.28□□□□□ -1.24
HDAC6-234ENST00000493923 RPL13AP3Q6NVV1 102 aa7.28□□□□□ -1.24
HDAC6-234ENST00000493923 NOXRED1Q6NXP6 359 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms