RNA–Protein interactions for RNA: ENST00000493682.6

COL9A1-210, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 1,117 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-210ENST00000493682 OR2Z1Q8NG97 314 aa14.64□□□□□ -0.07
COL9A1-210ENST00000493682 OR8J3Q8NGG0 315 aa14.64□□□□□ -0.07
COL9A1-210ENST00000493682 SAMD8Q96LT4 415 aa14.64□□□□□ -0.07
COL9A1-210ENST00000493682 C1orf147Q96MC9 270 aaPredicted RBP14.64□□□□□ -0.07
COL9A1-210ENST00000493682 ZNF696Q9H7X3 374 aa14.64□□□□□ -0.07
COL9A1-210ENST00000493682 PLEK2Q9NYT0 353 aa14.64□□□□□ -0.07
COL9A1-210ENST00000493682 HTR3EA5X5Y0 456 aa14.63□□□□□ -0.07
COL9A1-210ENST00000493682 A6NIZ1 184 aa14.63□□□□□ -0.07
COL9A1-210ENST00000493682 GSTM3P21266 225 aa14.63□□□□□ -0.07
COL9A1-210ENST00000493682 FUT4P22083 530 aa14.63□□□□□ -0.07
COL9A1-210ENST00000493682 TNFSF4P23510 183 aa14.63□□□□□ -0.07
COL9A1-210ENST00000493682 RAP1BP61224 184 aa14.63□□□□□ -0.07
COL9A1-210ENST00000493682 RAP1AP62834 184 aa14.63□□□□□ -0.07
COL9A1-210ENST00000493682 ST3GAL3Q11203 375 aa14.63□□□□□ -0.07
COL9A1-210ENST00000493682 ZMYND11Q15326 602 aa14.63□□□□□ -0.07
COL9A1-210ENST00000493682 CYBRD1Q53TN4 286 aa14.63□□□□□ -0.07
COL9A1-210ENST00000493682 METTL21CQ5VZV1 264 aa14.63□□□□□ -0.07
COL9A1-210ENST00000493682 ERICH5Q6P6B1 374 aa14.63□□□□□ -0.07
COL9A1-210ENST00000493682 Q6ZR03 302 aa14.63□□□□□ -0.07
COL9A1-210ENST00000493682 NPEPL1Q8NDH3 523 aa14.63□□□□□ -0.07
COL9A1-210ENST00000493682 OR51A7Q8NH64 312 aa14.63□□□□□ -0.07
COL9A1-210ENST00000493682 MAGEB18Q96M61 343 aa14.63□□□□□ -0.07
COL9A1-210ENST00000493682 ZNF583Q96ND8 569 aa14.63□□□□□ -0.07
COL9A1-210ENST00000493682 GPA33Q99795 319 aa14.63□□□□□ -0.07
COL9A1-210ENST00000493682 POLE4Q9NR33 117 aa14.63□□□□□ -0.07
COL9A1-210ENST00000493682 MAN2C1Q9NTJ4 1040 aa14.63□□□□□ -0.07
COL9A1-210ENST00000493682 TBCCD1Q9NVR7 557 aa14.63□□□□□ -0.07
COL9A1-210ENST00000493682 NDRG4Q9ULP0 352 aaKnown RBP14.63□□□□□ -0.07
COL9A1-210ENST00000493682 A4GNTQ9UNA3 340 aa14.63□□□□□ -0.07
COL9A1-210ENST00000493682 INSIG2Q9Y5U4 225 aa14.63□□□□□ -0.07
COL9A1-210ENST00000493682 TRAV27A0A087WT01 109 aa14.62□□□□□ -0.07
COL9A1-210ENST00000493682 A0A0G2JND7 137 aa14.62□□□□□ -0.07
COL9A1-210ENST00000493682 COX5BP10606 129 aa14.62□□□□□ -0.07
COL9A1-210ENST00000493682 TNFRSF1AP19438 455 aa14.62□□□□□ -0.07
COL9A1-210ENST00000493682 KITLGP21583 273 aa14.62□□□□□ -0.07
COL9A1-210ENST00000493682 TUBG1P23258 451 aa14.62□□□□□ -0.07
COL9A1-210ENST00000493682 BTG1P62324 171 aa14.62□□□□□ -0.07
COL9A1-210ENST00000493682 FHL1Q13642 323 aa14.62□□□□□ -0.07
COL9A1-210ENST00000493682 MICU2Q8IYU8 434 aa14.62□□□□□ -0.07
COL9A1-210ENST00000493682 C10orf82Q8WW14 230 aa14.62□□□□□ -0.07
COL9A1-210ENST00000493682 TPD52L3Q96J77 140 aa14.62□□□□□ -0.07
COL9A1-210ENST00000493682 PRRC1Q96M27 445 aa14.62□□□□□ -0.07
COL9A1-210ENST00000493682 ZNF48Q96MX3 618 aaPredicted RBP14.62□□□□□ -0.07
COL9A1-210ENST00000493682 SIGLEC11Q96RL6 698 aa14.62□□□□□ -0.07
COL9A1-210ENST00000493682 MRI1Q9BV20 369 aa14.62□□□□□ -0.07
COL9A1-210ENST00000493682 ZMAT3Q9HA38 289 aaKnown RBP14.62□□□□□ -0.07
COL9A1-210ENST00000493682 EMC7Q9NPA0 242 aa14.62□□□□□ -0.07
COL9A1-210ENST00000493682 TUBG2Q9NRH3 451 aa14.62□□□□□ -0.07
COL9A1-210ENST00000493682 A8MXK9 166 aa14.61□□□□□ -0.07
COL9A1-210ENST00000493682 F5H0A9 414 aaPredicted RBP14.61□□□□□ -0.07
COL9A1-210ENST00000493682 H7C1C5 153 aa14.61□□□□□ -0.07
COL9A1-210ENST00000493682 EDF1O60869 148 aaKnown RBP14.61□□□□□ -0.07
COL9A1-210ENST00000493682 KDELR2P33947 212 aa14.61□□□□□ -0.07
COL9A1-210ENST00000493682 HTR5AP47898 357 aa14.61□□□□□ -0.07
COL9A1-210ENST00000493682 LCN6P62502 163 aa14.61□□□□□ -0.07
COL9A1-210ENST00000493682 BAMBIQ13145 260 aa14.61□□□□□ -0.07
COL9A1-210ENST00000493682 LRRC23Q53EV4 343 aaPredicted RBP14.61□□□□□ -0.07
COL9A1-210ENST00000493682 OAFQ86UD1 273 aa14.61□□□□□ -0.07
COL9A1-210ENST00000493682 NRMQ8IXM6 262 aa14.61□□□□□ -0.07
COL9A1-210ENST00000493682 ITLN1Q8WWA0 313 aa14.61□□□□□ -0.07
COL9A1-210ENST00000493682 CMBLQ96DG6 245 aa14.61□□□□□ -0.07
COL9A1-210ENST00000493682 SIKE1Q9BRV8 207 aa14.61□□□□□ -0.07
COL9A1-210ENST00000493682 WACQ9BTA9 647 aa14.61□□□□□ -0.07
COL9A1-210ENST00000493682 PPP1R3CQ9UQK1 317 aa14.61□□□□□ -0.07
COL9A1-210ENST00000493682 STARD10Q9Y365 291 aa14.61□□□□□ -0.07
COL9A1-210ENST00000493682 SGCEO43556 437 aa14.6□□□□□ -0.07
COL9A1-210ENST00000493682 DOK2O60496 412 aa14.6□□□□□ -0.07
COL9A1-210ENST00000493682 SCRN3Q0VDG4 424 aa14.6□□□□□ -0.07
COL9A1-210ENST00000493682 ESCO2Q56NI9 601 aa14.6□□□□□ -0.07
COL9A1-210ENST00000493682 COQ5Q5HYK3 327 aa14.6□□□□□ -0.07
COL9A1-210ENST00000493682 OR13C2Q8NGS9 318 aa14.6□□□□□ -0.07
COL9A1-210ENST00000493682 HAVCR1Q96D42 359 aa14.6□□□□□ -0.07
COL9A1-210ENST00000493682 UNKLQ9H9P5 680 aaKnown RBP14.6□□□□□ -0.07
COL9A1-210ENST00000493682 RHCGQ9UBD6 479 aa14.6□□□□□ -0.07
COL9A1-210ENST00000493682 OR5V1Q9UGF6 321 aa14.6□□□□□ -0.07
COL9A1-210ENST00000493682 IL19Q9UHD0 177 aa14.6□□□□□ -0.07
COL9A1-210ENST00000493682 EFCAB9A8MZ26 197 aa14.59□□□□□ -0.07
COL9A1-210ENST00000493682 TMEM178BH3BS89 294 aa14.59□□□□□ -0.07
COL9A1-210ENST00000493682 MRASO14807 208 aa14.59□□□□□ -0.07
COL9A1-210ENST00000493682 SURF4O15260 269 aa14.59□□□□□ -0.07
COL9A1-210ENST00000493682 NPPAP01160 153 aa14.59□□□□□ -0.07
COL9A1-210ENST00000493682 RNASE1P07998 156 aaKnown RBP14.59□□□□□ -0.07
COL9A1-210ENST00000493682 IFNA8P32881 189 aa14.59□□□□□ -0.07
COL9A1-210ENST00000493682 CD80P33681 288 aa14.59□□□□□ -0.07
COL9A1-210ENST00000493682 MDH2P40926 338 aaKnown RBP14.59□□□□□ -0.07
COL9A1-210ENST00000493682 YAP1P46937 504 aaKnown RBP14.59□□□□□ -0.07
COL9A1-210ENST00000493682 ERFP50548 548 aa14.59□□□□□ -0.07
COL9A1-210ENST00000493682 SELENOWP63302 87 aa14.59□□□□□ -0.07
COL9A1-210ENST00000493682 PRKCDQ05655 676 aa14.59□□□□□ -0.07
COL9A1-210ENST00000493682 PAX8Q06710 450 aa14.59□□□□□ -0.07
COL9A1-210ENST00000493682 ANKDD1AQ495B1 522 aa14.59□□□□□ -0.07
COL9A1-210ENST00000493682 VASH1Q7L8A9 365 aaPredicted RBP14.59□□□□□ -0.07
COL9A1-210ENST00000493682 SLC25A28Q96A46 364 aa14.59□□□□□ -0.07
COL9A1-210ENST00000493682 OR2V2Q96R30 315 aa14.59□□□□□ -0.07
COL9A1-210ENST00000493682 MS4A7Q9GZW8 240 aaPredicted RBP14.59□□□□□ -0.07
COL9A1-210ENST00000493682 ADAM18Q9Y3Q7 739 aa14.59□□□□□ -0.07
COL9A1-210ENST00000493682 SNX13Q9Y5W8 968 aa14.59□□□□□ -0.07
COL9A1-210ENST00000493682 CEACAM18A8MTB9 384 aa14.58□□□□□ -0.08
COL9A1-210ENST00000493682 FAM220BPB1ANY3 271 aa14.58□□□□□ -0.08
COL9A1-210ENST00000493682 CLDN34H7C241 214 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms