RNA–Protein interactions for RNA: ENST00000493608.1

COL6A3-214, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2

Gene COL6A3, Length 742 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-214ENST00000493608 MPZL1O95297 269 aa9.11□□□□□ -0.95
COL6A3-214ENST00000493608 SNAP29O95721 258 aa9.11□□□□□ -0.95
COL6A3-214ENST00000493608 GPANK1O95872 356 aa9.11□□□□□ -0.95
COL6A3-214ENST00000493608 NGFP01138 241 aa9.11□□□□□ -0.95
COL6A3-214ENST00000493608 SEMG1P04279 462 aa9.11□□□□□ -0.95
COL6A3-214ENST00000493608 CTLA4P16410 223 aa9.11□□□□□ -0.95
COL6A3-214ENST00000493608 MPV17P39210 176 aa9.11□□□□□ -0.95
COL6A3-214ENST00000493608 LIMS1P48059 325 aa9.11□□□□□ -0.95
COL6A3-214ENST00000493608 GDI2P50395 445 aaKnown RBP9.11□□□□□ -0.95
COL6A3-214ENST00000493608 SELENOVP59797 346 aa9.11□□□□□ -0.95
COL6A3-214ENST00000493608 CCL8P80075 99 aa9.11□□□□□ -0.95
COL6A3-214ENST00000493608 RIN1Q13671 783 aa9.11□□□□□ -0.95
COL6A3-214ENST00000493608 CCNIQ14094 377 aa9.11□□□□□ -0.95
COL6A3-214ENST00000493608 SAMD4BQ5PRF9 694 aaKnown RBP9.11□□□□□ -0.95
COL6A3-214ENST00000493608 CYP2R1Q6VVX0 501 aa9.11□□□□□ -0.95
COL6A3-214ENST00000493608 Q6ZS46 218 aa9.11□□□□□ -0.95
COL6A3-214ENST00000493608 PTCHD4Q6ZW05 846 aa9.11□□□□□ -0.95
COL6A3-214ENST00000493608 FAM122BQ7Z309 247 aa9.11□□□□□ -0.95
COL6A3-214ENST00000493608 ZER1Q7Z7L7 766 aa9.11□□□□□ -0.95
COL6A3-214ENST00000493608 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.11□□□□□ -0.95
COL6A3-214ENST00000493608 FNDC8Q8TC99 324 aa9.11□□□□□ -0.95
COL6A3-214ENST00000493608 NSMCE2Q96MF7 247 aa9.11□□□□□ -0.95
COL6A3-214ENST00000493608 CCT8L2Q96SF2 557 aa9.11□□□□□ -0.95
COL6A3-214ENST00000493608 FUZQ9BT04 418 aa9.11□□□□□ -0.95
COL6A3-214ENST00000493608 BEX2Q9BXY8 128 aa9.11□□□□□ -0.95
COL6A3-214ENST00000493608 BCL2L14Q9BZR8 327 aa9.11□□□□□ -0.95
COL6A3-214ENST00000493608 POLE4Q9NR33 117 aa9.11□□□□□ -0.95
COL6A3-214ENST00000493608 EIF3KQ9UBQ5 218 aaKnown RBP9.11□□□□□ -0.95
COL6A3-214ENST00000493608 MAGEL2Q9UJ55 1249 aa9.11□□□□□ -0.95
COL6A3-214ENST00000493608 COA3Q9Y2R0 106 aaPredicted RBP9.11□□□□□ -0.95
COL6A3-214ENST00000493608 TIMM10BQ9Y5J6 103 aa9.11□□□□□ -0.95
COL6A3-214ENST00000493608 IGLV3-9A0A075B6K5 115 aa9.1□□□□□ -0.95
COL6A3-214ENST00000493608 C12orf71A8MTZ7 269 aa9.1□□□□□ -0.95
COL6A3-214ENST00000493608 C17orf100A8MU93 164 aa9.1□□□□□ -0.95
COL6A3-214ENST00000493608 B2RBV5 119 aa9.1□□□□□ -0.95
COL6A3-214ENST00000493608 WNT9BO14905 357 aa9.1□□□□□ -0.95
COL6A3-214ENST00000493608 CDC14BO60729 498 aa9.1□□□□□ -0.95
COL6A3-214ENST00000493608 PPP1R3DO95685 299 aa9.1□□□□□ -0.95
COL6A3-214ENST00000493608 ITGA2P17301 1181 aa9.1□□□□□ -0.95
COL6A3-214ENST00000493608 MSR1P21757 451 aa9.1□□□□□ -0.95
COL6A3-214ENST00000493608 IGFBP5P24593 272 aa9.1□□□□□ -0.95
COL6A3-214ENST00000493608 RRM2P31350 389 aa9.1□□□□□ -0.95
COL6A3-214ENST00000493608 CDKN2AP42771 156 aaKnown RBP9.1□□□□□ -0.95
COL6A3-214ENST00000493608 CENPAP49450 140 aa9.1□□□□□ -0.95
COL6A3-214ENST00000493608 PCBD1P61457 104 aa9.1□□□□□ -0.95
COL6A3-214ENST00000493608 KRR1Q13601 381 aaKnown RBP9.1□□□□□ -0.95
COL6A3-214ENST00000493608 TSTQ16762 297 aaKnown RBP9.1□□□□□ -0.95
COL6A3-214ENST00000493608 ZNF718Q3SXZ3 478 aa9.1□□□□□ -0.95
COL6A3-214ENST00000493608 TMEM255AQ5JRV8 349 aa9.1□□□□□ -0.95
COL6A3-214ENST00000493608 FAM166AQ6J272 317 aa9.1□□□□□ -0.95
COL6A3-214ENST00000493608 TMEM154Q6P9G4 183 aa9.1□□□□□ -0.95
COL6A3-214ENST00000493608 C16orf89Q6UX73 402 aa9.1□□□□□ -0.95
COL6A3-214ENST00000493608 FOXL2NBQ6ZUU3 175 aa9.1□□□□□ -0.95
COL6A3-214ENST00000493608 RFPL4BQ6ZWI9 263 aa9.1□□□□□ -0.95
COL6A3-214ENST00000493608 FITM2Q8N6M3 262 aa9.1□□□□□ -0.95
COL6A3-214ENST00000493608 ABHD4Q8TB40 342 aa9.1□□□□□ -0.95
COL6A3-214ENST00000493608 SLC25A40Q8TBP6 338 aa9.1□□□□□ -0.95
COL6A3-214ENST00000493608 SLC7A6Q92536 515 aa9.1□□□□□ -0.95
COL6A3-214ENST00000493608 RDH5Q92781 318 aa9.1□□□□□ -0.95
COL6A3-214ENST00000493608 MCUR1Q96AQ8 359 aa9.1□□□□□ -0.95
COL6A3-214ENST00000493608 DHRS1Q96LJ7 313 aa9.1□□□□□ -0.95
COL6A3-214ENST00000493608 TSSK2Q96PF2 358 aa9.1□□□□□ -0.95
COL6A3-214ENST00000493608 ERMAPQ96PL5 475 aaPredicted RBP9.1□□□□□ -0.95
COL6A3-214ENST00000493608 OR2J1Q9GZK6 312 aa9.1□□□□□ -0.95
COL6A3-214ENST00000493608 NDEL1Q9GZM8 345 aa9.1□□□□□ -0.95
COL6A3-214ENST00000493608 NUAK2Q9H093 628 aa9.1□□□□□ -0.95
COL6A3-214ENST00000493608 SHARPINQ9H0F6 387 aa9.1□□□□□ -0.95
COL6A3-214ENST00000493608 MRPL18Q9H0U6 180 aaKnown RBP9.1□□□□□ -0.95
COL6A3-214ENST00000493608 SYT4Q9H2B2 425 aa9.1□□□□□ -0.95
COL6A3-214ENST00000493608 NRIP3Q9NQ35 241 aa9.1□□□□□ -0.95
COL6A3-214ENST00000493608 HINT3Q9NQE9 182 aaKnown RBP9.1□□□□□ -0.95
COL6A3-214ENST00000493608 ZNF275Q9NSD4 429 aaPredicted RBP9.1□□□□□ -0.95
COL6A3-214ENST00000493608 TREM2Q9NZC2 230 aa9.1□□□□□ -0.95
COL6A3-214ENST00000493608 KCNS2Q9ULS6 477 aa9.1□□□□□ -0.95
COL6A3-214ENST00000493608 ATRQ13535 2644 aa9.09□□□□□ -0.95
COL6A3-214ENST00000493608 FBN1P35555 2871 aaKnown RBP9.09□□□□□ -0.95
COL6A3-214ENST00000493608 DCTN6O00399 190 aa9.09□□□□□ -0.95
COL6A3-214ENST00000493608 TPD52L2O43399 206 aaKnown RBP9.09□□□□□ -0.95
COL6A3-214ENST00000493608 PPIHO43447 177 aaKnown RBP9.09□□□□□ -0.95
COL6A3-214ENST00000493608 SPRY3O43610 288 aa9.09□□□□□ -0.95
COL6A3-214ENST00000493608 OR10H3O60404 316 aa9.09□□□□□ -0.95
COL6A3-214ENST00000493608 ALX3O95076 343 aa9.09□□□□□ -0.95
COL6A3-214ENST00000493608 FABP3P05413 133 aa9.09□□□□□ -0.95
COL6A3-214ENST00000493608 TACSTD2P09758 323 aa9.09□□□□□ -0.95
COL6A3-214ENST00000493608 GCH1P30793 250 aa9.09□□□□□ -0.95
COL6A3-214ENST00000493608 SDHAP31040 664 aa9.09□□□□□ -0.95
COL6A3-214ENST00000493608 RBMXP38159 391 aaKnown RBP9.09□□□□□ -0.95
COL6A3-214ENST00000493608 GPR6P46095 362 aaPredicted RBP9.09□□□□□ -0.95
COL6A3-214ENST00000493608 CHN2P52757 468 aa9.09□□□□□ -0.95
COL6A3-214ENST00000493608 SMIM11AP58511 58 aa9.09□□□□□ -0.95
COL6A3-214ENST00000493608 PPP1R8Q12972 351 aaKnown RBP9.09□□□□□ -0.95
COL6A3-214ENST00000493608 HNRNPA0Q13151 305 aaKnown RBP9.09□□□□□ -0.95
COL6A3-214ENST00000493608 FAM120AOSQ5T036 256 aa9.09□□□□□ -0.95
COL6A3-214ENST00000493608 GPR139Q6DWJ6 353 aa9.09□□□□□ -0.95
COL6A3-214ENST00000493608 C1orf94Q6P1W5 598 aa9.09□□□□□ -0.95
COL6A3-214ENST00000493608 DPY19L2P2Q6ZN68 376 aa9.09□□□□□ -0.95
COL6A3-214ENST00000493608 ZDHHC21Q8IVQ6 265 aa9.09□□□□□ -0.95
COL6A3-214ENST00000493608 KLF14Q8TD94 323 aaPredicted RBP9.09□□□□□ -0.95
COL6A3-214ENST00000493608 SNX33Q8WV41 574 aa9.09□□□□□ -0.95
COL6A3-214ENST00000493608 IPCEF1Q8WWN9 437 aaPredicted RBP9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms