RNA–Protein interactions for RNA: ENST00000493265.2

LIME1-208, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 2

Gene LIME1, Length 661 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-208ENST00000493265 LHFPL6Q9Y693 200 aa15□□□□□ -0.01
LIME1-208ENST00000493265 HCFC1P51610 2035 aa14.99□□□□□ -0.01
LIME1-208ENST00000493265 TACC2O95359 2948 aa14.99□□□□□ -0.01
LIME1-208ENST00000493265 XPNPEP2O43895 674 aa14.99□□□□□ -0.01
LIME1-208ENST00000493265 FAM20BO75063 409 aa14.99□□□□□ -0.01
LIME1-208ENST00000493265 UBL3O95164 117 aa14.99□□□□□ -0.01
LIME1-208ENST00000493265 RAB36O95755 333 aa14.99□□□□□ -0.01
LIME1-208ENST00000493265 HRGP04196 525 aa14.99□□□□□ -0.01
LIME1-208ENST00000493265 DBTP11182 482 aaKnown RBP14.99□□□□□ -0.01
LIME1-208ENST00000493265 PCBD1P61457 104 aa14.99□□□□□ -0.01
LIME1-208ENST00000493265 SORDQ00796 357 aa14.99□□□□□ -0.01
LIME1-208ENST00000493265 AQP6Q13520 282 aa14.99□□□□□ -0.01
LIME1-208ENST00000493265 EIF2B1Q14232 305 aaKnown RBP14.99□□□□□ -0.01
LIME1-208ENST00000493265 GSG1Q2KHT4 349 aa14.99□□□□□ -0.01
LIME1-208ENST00000493265 LAIR2Q6ISS4 152 aa14.99□□□□□ -0.01
LIME1-208ENST00000493265 SPATC1Q76KD6 591 aa14.99□□□□□ -0.01
LIME1-208ENST00000493265 SLC16A9Q7RTY1 509 aa14.99□□□□□ -0.01
LIME1-208ENST00000493265 P2RY8Q86VZ1 359 aa14.99□□□□□ -0.01
LIME1-208ENST00000493265 OR4F15Q8NGB8 312 aa14.99□□□□□ -0.01
LIME1-208ENST00000493265 AKR7LQ8NHP1 331 aa14.99□□□□□ -0.01
LIME1-208ENST00000493265 ADGRL4Q9HBW9 690 aa14.99□□□□□ -0.01
LIME1-208ENST00000493265 KCNG2Q9UJ96 466 aa14.99□□□□□ -0.01
LIME1-208ENST00000493265 RPL36Q9Y3U8 105 aaKnown RBP14.99□□□□□ -0.01
LIME1-208ENST00000493265 SLC25A15Q9Y619 301 aa14.99□□□□□ -0.01
LIME1-208ENST00000493265 CCDC168Q8NDH2 2452 aa14.99□□□□□ -0.01
LIME1-208ENST00000493265 ARPC4-TTLL3A0A0A6YYG9 625 aa14.98□□□□□ -0.01
LIME1-208ENST00000493265 M0R1B8 84 aa14.98□□□□□ -0.01
LIME1-208ENST00000493265 RER1O15258 196 aa14.98□□□□□ -0.01
LIME1-208ENST00000493265 DENRO43583 198 aaKnown RBP14.98□□□□□ -0.01
LIME1-208ENST00000493265 TMCC2O75069 709 aa14.98□□□□□ -0.01
LIME1-208ENST00000493265 THBDP07204 575 aa14.98□□□□□ -0.01
LIME1-208ENST00000493265 SBK2P0C263 348 aa14.98□□□□□ -0.01
LIME1-208ENST00000493265 HOXB1P14653 301 aaPredicted RBP14.98□□□□□ -0.01
LIME1-208ENST00000493265 PPP3CBP16298 524 aa14.98□□□□□ -0.01
LIME1-208ENST00000493265 ARR3P36575 388 aa14.98□□□□□ -0.01
LIME1-208ENST00000493265 IDH3GP51553 393 aaPredicted RBP14.98□□□□□ -0.01
LIME1-208ENST00000493265 GGTLC2Q14390 218 aa14.98□□□□□ -0.01
LIME1-208ENST00000493265 RAB39AQ14964 217 aa14.98□□□□□ -0.01
LIME1-208ENST00000493265 PABPC1L2AQ5JQF8 200 aa14.98□□□□□ -0.01
LIME1-208ENST00000493265 C6orf141Q5SZD1 244 aa14.98□□□□□ -0.01
LIME1-208ENST00000493265 SLC18B1Q6NT16 456 aa14.98□□□□□ -0.01
LIME1-208ENST00000493265 ZNF774Q6NX45 483 aa14.98□□□□□ -0.01
LIME1-208ENST00000493265 MEX3BQ6ZN04 569 aaKnown RBP14.98□□□□□ -0.01
LIME1-208ENST00000493265 DCXRQ7Z4W1 244 aa14.98□□□□□ -0.01
LIME1-208ENST00000493265 SLC35F2Q8IXU6 374 aa14.98□□□□□ -0.01
LIME1-208ENST00000493265 CCDC36Q8IYA8 594 aa14.98□□□□□ -0.01
LIME1-208ENST00000493265 ZNF786Q8N393 782 aa14.98□□□□□ -0.01
LIME1-208ENST00000493265 OR10H4Q8NGA5 316 aa14.98□□□□□ -0.01
LIME1-208ENST00000493265 FBLIM1Q8WUP2 373 aa14.98□□□□□ -0.01
LIME1-208ENST00000493265 THEM6Q8WUY1 208 aa14.98□□□□□ -0.01
LIME1-208ENST00000493265 LGALS12Q96DT0 336 aa14.98□□□□□ -0.01
LIME1-208ENST00000493265 RHNO1Q9BSD3 238 aa14.98□□□□□ -0.01
LIME1-208ENST00000493265 OR2H1Q9GZK4 316 aa14.98□□□□□ -0.01
LIME1-208ENST00000493265 OR10A4Q9H209 315 aa14.98□□□□□ -0.01
LIME1-208ENST00000493265 MARCH7Q9H992 704 aa14.98□□□□□ -0.01
LIME1-208ENST00000493265 B3GNT2Q9NY97 397 aa14.98□□□□□ -0.01
LIME1-208ENST00000493265 UBAP1Q9NZ09 502 aa14.98□□□□□ -0.01
LIME1-208ENST00000493265 CYB5R1Q9UHQ9 305 aa14.98□□□□□ -0.01
LIME1-208ENST00000493265 GDF2Q9UK05 429 aaPredicted RBP14.98□□□□□ -0.01
LIME1-208ENST00000493265 TIMM10BQ9Y5J6 103 aa14.98□□□□□ -0.01
LIME1-208ENST00000493265 CACNA1CQ13936 2221 aa14.98□□□□□ -0.01
LIME1-208ENST00000493265 CELA3BP08861 270 aa14.97□□□□□ -0.01
LIME1-208ENST00000493265 MMP7P09237 267 aaPredicted RBP14.97□□□□□ -0.01
LIME1-208ENST00000493265 KIR2DL3P43628 341 aa14.97□□□□□ -0.01
LIME1-208ENST00000493265 PSG4Q00888 419 aa14.97□□□□□ -0.01
LIME1-208ENST00000493265 SCRN3Q0VDG4 424 aa14.97□□□□□ -0.01
LIME1-208ENST00000493265 POU4F2Q12837 409 aa14.97□□□□□ -0.01
LIME1-208ENST00000493265 TMED1Q13445 227 aa14.97□□□□□ -0.01
LIME1-208ENST00000493265 MED21Q13503 144 aa14.97□□□□□ -0.01
LIME1-208ENST00000493265 CFAP77Q6ZQR2 320 aa14.97□□□□□ -0.01
LIME1-208ENST00000493265 DPPA2Q7Z7J5 298 aa14.97□□□□□ -0.01
LIME1-208ENST00000493265 GJC3Q8NFK1 279 aa14.97□□□□□ -0.01
LIME1-208ENST00000493265 MS4A3Q96HJ5 214 aa14.97□□□□□ -0.01
LIME1-208ENST00000493265 BOD1Q96IK1 185 aa14.97□□□□□ -0.01
LIME1-208ENST00000493265 USB1Q9BQ65 265 aaKnown RBP14.97□□□□□ -0.01
LIME1-208ENST00000493265 WNT5BQ9H1J7 359 aa14.97□□□□□ -0.01
LIME1-208ENST00000493265 OBP2BQ9NPH6 170 aa14.97□□□□□ -0.01
LIME1-208ENST00000493265 CENPMQ9NSP4 180 aa14.97□□□□□ -0.01
LIME1-208ENST00000493265 HAO2Q9NYQ3 351 aa14.97□□□□□ -0.01
LIME1-208ENST00000493265 PLEK2Q9NYT0 353 aa14.97□□□□□ -0.01
LIME1-208ENST00000493265 NPAP1Q9NZP6 1156 aa14.97□□□□□ -0.01
LIME1-208ENST00000493265 LAMP5Q9UJQ1 280 aa14.97□□□□□ -0.01
LIME1-208ENST00000493265 KLHDC2Q9Y2U9 406 aa14.97□□□□□ -0.01
LIME1-208ENST00000493265 CASKO14936 926 aa14.96□□□□□ -0.01
LIME1-208ENST00000493265 SGCEO43556 437 aa14.96□□□□□ -0.01
LIME1-208ENST00000493265 DOK2O60496 412 aa14.96□□□□□ -0.01
LIME1-208ENST00000493265 PLP2Q04941 152 aa14.96□□□□□ -0.01
LIME1-208ENST00000493265 TEX30Q5JUR7 227 aa14.96□□□□□ -0.01
LIME1-208ENST00000493265 CDC20BQ86Y33 519 aa14.96□□□□□ -0.01
LIME1-208ENST00000493265 RFLNBQ8N5W9 214 aa14.96□□□□□ -0.01
LIME1-208ENST00000493265 MAP6Q96JE9 813 aa14.96□□□□□ -0.01
LIME1-208ENST00000493265 AMELYQ99218 206 aa14.96□□□□□ -0.01
LIME1-208ENST00000493265 ABHD6Q9BV23 337 aa14.96□□□□□ -0.01
LIME1-208ENST00000493265 YIPF3Q9GZM5 350 aa14.96□□□□□ -0.01
LIME1-208ENST00000493265 CRIM1Q9NZV1 1036 aa14.96□□□□□ -0.01
LIME1-208ENST00000493265 COPS3Q9UNS2 423 aa14.96□□□□□ -0.01
LIME1-208ENST00000493265 HIVEP1P15822 2718 aa14.96□□□□□ -0.01
LIME1-208ENST00000493265 IQCMA0A1B0GVH7 501 aa14.95□□□□□ -0.02
LIME1-208ENST00000493265 PTGES3LE9PB15 166 aa14.95□□□□□ -0.02
LIME1-208ENST00000493265 ZNF670-ZNF695F2Z2N8 137 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms