RNA–Protein interactions for RNA: ENST00000492417.5

TRA2B-215, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,141 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-215ENST00000492417 PRKCDQ05655 676 aa4.02□□□□□ -1.77
TRA2B-215ENST00000492417 Q0VFX4 171 aa4.02□□□□□ -1.77
TRA2B-215ENST00000492417 KLRB1Q12918 225 aa4.02□□□□□ -1.77
TRA2B-215ENST00000492417 EIF2B1Q14232 305 aaKnown RBP4.02□□□□□ -1.77
TRA2B-215ENST00000492417 CDK10Q15131 360 aa4.02□□□□□ -1.77
TRA2B-215ENST00000492417 SMN1Q16637 294 aaKnown RBP4.02□□□□□ -1.77
TRA2B-215ENST00000492417 TATDN3Q17R31 274 aa4.02□□□□□ -1.77
TRA2B-215ENST00000492417 TP53I3Q53FA7 332 aa4.02□□□□□ -1.77
TRA2B-215ENST00000492417 SFRP4Q6FHJ7 346 aaPredicted RBP4.02□□□□□ -1.77
TRA2B-215ENST00000492417 OR7E24Q6IFN5 339 aa4.02□□□□□ -1.77
TRA2B-215ENST00000492417 ESPNLQ6ZVH7 1005 aa4.02□□□□□ -1.77
TRA2B-215ENST00000492417 DPY19L4Q7Z388 723 aa4.02□□□□□ -1.77
TRA2B-215ENST00000492417 C12orf45Q8N5I9 185 aaPredicted RBP4.02□□□□□ -1.77
TRA2B-215ENST00000492417 PAPD5Q8NDF8 572 aaKnown RBP4.02□□□□□ -1.77
TRA2B-215ENST00000492417 OR2M3Q8NG83 312 aa4.02□□□□□ -1.77
TRA2B-215ENST00000492417 OR14K1Q8NGZ2 314 aa4.02□□□□□ -1.77
TRA2B-215ENST00000492417 ACOT12Q8WYK0 555 aa4.02□□□□□ -1.77
TRA2B-215ENST00000492417 CTHRC1Q96CG8 243 aa4.02□□□□□ -1.77
TRA2B-215ENST00000492417 CPNE2Q96FN4 548 aaPredicted RBP4.02□□□□□ -1.77
TRA2B-215ENST00000492417 FAM71F1Q96KD3 344 aaPredicted RBP4.02□□□□□ -1.77
TRA2B-215ENST00000492417 CNTNAP3BQ96NU0 1288 aa4.02□□□□□ -1.77
TRA2B-215ENST00000492417 MOGAT1Q96PD6 335 aa4.02□□□□□ -1.77
TRA2B-215ENST00000492417 CNTNAP3Q9BZ76 1288 aa4.02□□□□□ -1.77
TRA2B-215ENST00000492417 TUBG2Q9NRH3 451 aa4.02□□□□□ -1.77
TRA2B-215ENST00000492417 KCNE5Q9UJ90 142 aa4.02□□□□□ -1.77
TRA2B-215ENST00000492417 TINAGQ9UJW2 476 aa4.02□□□□□ -1.77
TRA2B-215ENST00000492417 ING1Q9UK53 422 aaPredicted RBP4.02□□□□□ -1.77
TRA2B-215ENST00000492417 ZNF346Q9UL40 294 aaKnown RBP4.02□□□□□ -1.77
TRA2B-215ENST00000492417 COA3Q9Y2R0 106 aaPredicted RBP4.02□□□□□ -1.77
TRA2B-215ENST00000492417 CBY1Q9Y3M2 126 aa4.02□□□□□ -1.77
TRA2B-215ENST00000492417 A0A1B0GVC2 190 aa4.02□□□□□ -1.77
TRA2B-215ENST00000492417 SSX4O60224 188 aa4.02□□□□□ -1.77
TRA2B-215ENST00000492417 TSPAN2O60636 221 aa4.02□□□□□ -1.77
TRA2B-215ENST00000492417 GATBO75879 557 aaKnown RBP4.02□□□□□ -1.77
TRA2B-215ENST00000492417 IFNA17P01571 189 aa4.02□□□□□ -1.77
TRA2B-215ENST00000492417 PATE4P0C8F1 98 aa4.02□□□□□ -1.77
TRA2B-215ENST00000492417 CLUP10909 449 aa4.02□□□□□ -1.77
TRA2B-215ENST00000492417 BMP4P12644 408 aa4.02□□□□□ -1.77
TRA2B-215ENST00000492417 RPS2P15880 293 aaKnown RBP4.02□□□□□ -1.77
TRA2B-215ENST00000492417 MAKP20794 623 aa4.02□□□□□ -1.77
TRA2B-215ENST00000492417 IL11P20809 199 aa4.02□□□□□ -1.77
TRA2B-215ENST00000492417 PTPN6P29350 595 aa4.02□□□□□ -1.77
TRA2B-215ENST00000492417 CRABP1P29762 137 aa4.02□□□□□ -1.77
TRA2B-215ENST00000492417 SSTR2P30874 369 aa4.02□□□□□ -1.77
TRA2B-215ENST00000492417 HTR5AP47898 357 aa4.02□□□□□ -1.77
TRA2B-215ENST00000492417 TNFSF10P50591 281 aa4.02□□□□□ -1.77
TRA2B-215ENST00000492417 CXCR4P61073 352 aa4.02□□□□□ -1.77
TRA2B-215ENST00000492417 RAC1P63000 192 aa4.02□□□□□ -1.77
TRA2B-215ENST00000492417 PSPHP78330 225 aa4.02□□□□□ -1.77
TRA2B-215ENST00000492417 FGL1Q08830 312 aa4.02□□□□□ -1.77
TRA2B-215ENST00000492417 ZNF141Q15928 474 aa4.02□□□□□ -1.77
TRA2B-215ENST00000492417 PGGHGQ32M88 737 aa4.02□□□□□ -1.77
TRA2B-215ENST00000492417 NKAPLQ5M9Q1 402 aa4.02□□□□□ -1.77
TRA2B-215ENST00000492417 TMEM179BQ7Z7N9 219 aa4.02□□□□□ -1.77
TRA2B-215ENST00000492417 CALHM3Q86XJ0 350 aa4.02□□□□□ -1.77
TRA2B-215ENST00000492417 TUSC5Q8IXB3 177 aa4.02□□□□□ -1.77
TRA2B-215ENST00000492417 DND1Q8IYX4 353 aaKnown RBP4.02□□□□□ -1.77
TRA2B-215ENST00000492417 RNF113BQ8IZP6 322 aaKnown RBP4.02□□□□□ -1.77
TRA2B-215ENST00000492417 NFAM1Q8NET5 270 aaPredicted RBP4.02□□□□□ -1.77
TRA2B-215ENST00000492417 OR4F15Q8NGB8 312 aa4.02□□□□□ -1.77
TRA2B-215ENST00000492417 NANOS1Q8WY41 292 aaKnown RBP4.02□□□□□ -1.77
TRA2B-215ENST00000492417 WFDC6Q9BQY6 131 aa4.02□□□□□ -1.77
TRA2B-215ENST00000492417 EIF5A2Q9GZV4 153 aaKnown RBP4.02□□□□□ -1.77
TRA2B-215ENST00000492417 OR51E2Q9H255 320 aa4.02□□□□□ -1.77
TRA2B-215ENST00000492417 UBQLN3Q9H347 655 aa4.02□□□□□ -1.77
TRA2B-215ENST00000492417 VNN3Q9NY84 501 aa4.02□□□□□ -1.77
TRA2B-215ENST00000492417 VSX1Q9NZR4 365 aaPredicted RBP4.02□□□□□ -1.77
TRA2B-215ENST00000492417 HIF3AQ9Y2N7 669 aa4.02□□□□□ -1.77
TRA2B-215ENST00000492417 PCDHGB1Q9Y5G3 927 aa4.02□□□□□ -1.77
TRA2B-215ENST00000492417 PLXNA2O75051 1894 aa4.02□□□□□ -1.77
TRA2B-215ENST00000492417 A0A087WUJ7 227 aa4.02□□□□□ -1.77
TRA2B-215ENST00000492417 A0A087WZY1 265 aa4.02□□□□□ -1.77
TRA2B-215ENST00000492417 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.02□□□□□ -1.77
TRA2B-215ENST00000492417 A0A0J9YW62 118 aa4.02□□□□□ -1.77
TRA2B-215ENST00000492417 GGT3PA6NGU5 568 aa4.02□□□□□ -1.77
TRA2B-215ENST00000492417 A6NIZ1 184 aa4.02□□□□□ -1.77
TRA2B-215ENST00000492417 PRSS44E7EML9 344 aa4.02□□□□□ -1.77
TRA2B-215ENST00000492417 HMGB3O15347 200 aaKnown RBP4.02□□□□□ -1.77
TRA2B-215ENST00000492417 PRKYO43930 277 aa4.02□□□□□ -1.77
TRA2B-215ENST00000492417 ALDOBP05062 364 aa4.02□□□□□ -1.77
TRA2B-215ENST00000492417 HTR1AP08908 422 aa4.02□□□□□ -1.77
TRA2B-215ENST00000492417 TMIGD3P0DMS9 266 aaPredicted RBP4.02□□□□□ -1.77
TRA2B-215ENST00000492417 FCGR2AP12318 317 aa4.02□□□□□ -1.77
TRA2B-215ENST00000492417 ZNF20P17024 532 aa4.02□□□□□ -1.77
TRA2B-215ENST00000492417 CDAP32320 146 aa4.02□□□□□ -1.77
TRA2B-215ENST00000492417 TNFSF8P32971 234 aa4.02□□□□□ -1.77
TRA2B-215ENST00000492417 ZFP36L2P47974 494 aaKnown RBP4.02□□□□□ -1.77
TRA2B-215ENST00000492417 ALDH3B2P48448 385 aa4.02□□□□□ -1.77
TRA2B-215ENST00000492417 LUMP51884 338 aaPredicted RBP4.02□□□□□ -1.77
TRA2B-215ENST00000492417 RAP1BP61224 184 aa4.02□□□□□ -1.77
TRA2B-215ENST00000492417 RAP1AP62834 184 aa4.02□□□□□ -1.77
TRA2B-215ENST00000492417 FOXK2Q01167 660 aa4.02□□□□□ -1.77
TRA2B-215ENST00000492417 EMX1Q04741 257 aaPredicted RBP4.02□□□□□ -1.77
TRA2B-215ENST00000492417 FUT5Q11128 374 aa4.02□□□□□ -1.77
TRA2B-215ENST00000492417 CEACAM16Q2WEN9 425 aa4.02□□□□□ -1.77
TRA2B-215ENST00000492417 DMRTC1Q5HYR2 192 aa4.02□□□□□ -1.77
TRA2B-215ENST00000492417 KCTD18Q6PI47 426 aaPredicted RBP4.02□□□□□ -1.77
TRA2B-215ENST00000492417 GDPGP1Q6ZNW5 385 aa4.02□□□□□ -1.77
TRA2B-215ENST00000492417 ADGRG3Q86Y34 549 aa4.02□□□□□ -1.77
TRA2B-215ENST00000492417 PARP16Q8N5Y8 322 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms