RNA–Protein interactions for RNA: ENST00000491659.5

USP39-217, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 648 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-217ENST00000491659 RIN1Q13671 783 aa12.91□□□□□ -0.34
USP39-217ENST00000491659 TRIM25Q14258 630 aaKnown RBP12.91□□□□□ -0.34
USP39-217ENST00000491659 CHRFAM7AQ494W8 412 aa12.91□□□□□ -0.34
USP39-217ENST00000491659 ELFN2Q5R3F8 820 aa12.91□□□□□ -0.34
USP39-217ENST00000491659 FAM166AQ6J272 317 aa12.91□□□□□ -0.34
USP39-217ENST00000491659 RPL13AP3Q6NVV1 102 aa12.91□□□□□ -0.34
USP39-217ENST00000491659 C1orf94Q6P1W5 598 aa12.91□□□□□ -0.34
USP39-217ENST00000491659 PGBD2Q6P3X8 592 aa12.91□□□□□ -0.34
USP39-217ENST00000491659 LEG1Q6P5S2 330 aa12.91□□□□□ -0.34
USP39-217ENST00000491659 PGM2L1Q6PCE3 622 aa12.91□□□□□ -0.34
USP39-217ENST00000491659 ZNF620Q6ZNG0 422 aa12.91□□□□□ -0.34
USP39-217ENST00000491659 HIPK1Q86Z02 1210 aa12.91□□□□□ -0.34
USP39-217ENST00000491659 OR52L1Q8NGH7 329 aa12.91□□□□□ -0.34
USP39-217ENST00000491659 SLC25A40Q8TBP6 338 aa12.91□□□□□ -0.34
USP39-217ENST00000491659 IPCEF1Q8WWN9 437 aaPredicted RBP12.91□□□□□ -0.34
USP39-217ENST00000491659 POP5Q969H6 163 aaKnown RBP12.91□□□□□ -0.34
USP39-217ENST00000491659 SAMD8Q96LT4 415 aa12.91□□□□□ -0.34
USP39-217ENST00000491659 NUAK2Q9H093 628 aa12.91□□□□□ -0.34
USP39-217ENST00000491659 MAGIXQ9H6Y5 334 aa12.91□□□□□ -0.34
USP39-217ENST00000491659 PLEK2Q9NYT0 353 aa12.91□□□□□ -0.34
USP39-217ENST00000491659 KCNS2Q9ULS6 477 aa12.91□□□□□ -0.34
USP39-217ENST00000491659 LYVE1Q9Y5Y7 322 aa12.91□□□□□ -0.34
USP39-217ENST00000491659 LOC100289279A0A1B0GTE1 492 aa12.9□□□□□ -0.34
USP39-217ENST00000491659 TCRBV5S2A0A599 114 aa12.9□□□□□ -0.34
USP39-217ENST00000491659 PLSCR5A0PG75 271 aa12.9□□□□□ -0.34
USP39-217ENST00000491659 H3BSA7 217 aa12.9□□□□□ -0.34
USP39-217ENST00000491659 ARPC3O15145 178 aa12.9□□□□□ -0.34
USP39-217ENST00000491659 ICMTO60725 284 aa12.9□□□□□ -0.34
USP39-217ENST00000491659 IGHV3-13P01766 116 aa12.9□□□□□ -0.34
USP39-217ENST00000491659 TACSTD2P09758 323 aa12.9□□□□□ -0.34
USP39-217ENST00000491659 CDKN2AP42771 156 aaKnown RBP12.9□□□□□ -0.34
USP39-217ENST00000491659 MAGEB1P43366 347 aa12.9□□□□□ -0.34
USP39-217ENST00000491659 GSSP48637 474 aa12.9□□□□□ -0.34
USP39-217ENST00000491659 PPP1CBP62140 327 aa12.9□□□□□ -0.34
USP39-217ENST00000491659 MRPS11P82912 194 aaKnown RBP12.9□□□□□ -0.34
USP39-217ENST00000491659 FAM98BQ52LJ0 330 aaKnown RBP12.9□□□□□ -0.34
USP39-217ENST00000491659 MBNL2Q5VZF2 373 aaKnown RBP12.9□□□□□ -0.34
USP39-217ENST00000491659 PRIMA1Q86XR5 153 aa12.9□□□□□ -0.34
USP39-217ENST00000491659 CCDC124Q96CT7 223 aaKnown RBP12.9□□□□□ -0.34
USP39-217ENST00000491659 MARS2Q96GW9 593 aaKnown RBP12.9□□□□□ -0.34
USP39-217ENST00000491659 C4orf45Q96LM5 186 aa12.9□□□□□ -0.34
USP39-217ENST00000491659 LRGUKQ96M69 825 aa12.9□□□□□ -0.34
USP39-217ENST00000491659 SNX18Q96RF0 628 aa12.9□□□□□ -0.34
USP39-217ENST00000491659 OR2J1Q9GZK6 312 aa12.9□□□□□ -0.34
USP39-217ENST00000491659 TMEM160Q9NX00 188 aa12.9□□□□□ -0.34
USP39-217ENST00000491659 ASH2LQ9UBL3 628 aa12.9□□□□□ -0.34
USP39-217ENST00000491659 CDC42EP3Q9UKI2 254 aa12.9□□□□□ -0.34
USP39-217ENST00000491659 SONP18583 2426 aaKnown RBP12.9□□□□□ -0.34
USP39-217ENST00000491659 LRP5LA4QPB2 252 aa12.89□□□□□ -0.35
USP39-217ENST00000491659 TPD52L2O43399 206 aaKnown RBP12.89□□□□□ -0.35
USP39-217ENST00000491659 LMX1BO60663 402 aa12.89□□□□□ -0.35
USP39-217ENST00000491659 CCNB2O95067 398 aa12.89□□□□□ -0.35
USP39-217ENST00000491659 T-ENOLP0DO92 83 aa12.89□□□□□ -0.35
USP39-217ENST00000491659 GSTM3P21266 225 aa12.89□□□□□ -0.35
USP39-217ENST00000491659 GPR6P46095 362 aaPredicted RBP12.89□□□□□ -0.35
USP39-217ENST00000491659 CCL8P80075 99 aa12.89□□□□□ -0.35
USP39-217ENST00000491659 TEKQ02763 1124 aa12.89□□□□□ -0.35
USP39-217ENST00000491659 VASH1Q7L8A9 365 aaPredicted RBP12.89□□□□□ -0.35
USP39-217ENST00000491659 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.89□□□□□ -0.35
USP39-217ENST00000491659 NPEPL1Q8NDH3 523 aa12.89□□□□□ -0.35
USP39-217ENST00000491659 OR9Q2Q8NGE9 314 aa12.89□□□□□ -0.35
USP39-217ENST00000491659 OR4K13Q8NH42 304 aa12.89□□□□□ -0.35
USP39-217ENST00000491659 KLF14Q8TD94 323 aaPredicted RBP12.89□□□□□ -0.35
USP39-217ENST00000491659 HPS1Q92902 700 aa12.89□□□□□ -0.35
USP39-217ENST00000491659 MSI2Q96DH6 328 aaKnown RBP12.89□□□□□ -0.35
USP39-217ENST00000491659 ASB9Q96DX5 294 aa12.89□□□□□ -0.35
USP39-217ENST00000491659 NMNAT3Q96T66 252 aa12.89□□□□□ -0.35
USP39-217ENST00000491659 TRIM15Q9C019 465 aa12.89□□□□□ -0.35
USP39-217ENST00000491659 RACGAP1Q9H0H5 632 aa12.89□□□□□ -0.35
USP39-217ENST00000491659 C1orf21Q9H246 121 aa12.89□□□□□ -0.35
USP39-217ENST00000491659 REEP1Q9H902 201 aa12.89□□□□□ -0.35
USP39-217ENST00000491659 CYSLTR2Q9NS75 346 aa12.89□□□□□ -0.35
USP39-217ENST00000491659 DECR2Q9NUI1 292 aa12.89□□□□□ -0.35
USP39-217ENST00000491659 NKIRAS2Q9NYR9 191 aa12.89□□□□□ -0.35
USP39-217ENST00000491659 LPAR3Q9UBY5 353 aa12.89□□□□□ -0.35
USP39-217ENST00000491659 CGGBP1Q9UFW8 167 aaPredicted RBP12.89□□□□□ -0.35
USP39-217ENST00000491659 CDH10Q9Y6N8 788 aa12.89□□□□□ -0.35
USP39-217ENST00000491659 IDH3BO43837 385 aa12.88□□□□□ -0.35
USP39-217ENST00000491659 LILRA1O75019 489 aa12.88□□□□□ -0.35
USP39-217ENST00000491659 MPZL1O95297 269 aa12.88□□□□□ -0.35
USP39-217ENST00000491659 NGFP01138 241 aa12.88□□□□□ -0.35
USP39-217ENST00000491659 GAAP10253 952 aa12.88□□□□□ -0.35
USP39-217ENST00000491659 HIST1H1CP16403 213 aaKnown RBP12.88□□□□□ -0.35
USP39-217ENST00000491659 COL8A2P25067 703 aa12.88□□□□□ -0.35
USP39-217ENST00000491659 MPV17P39210 176 aa12.88□□□□□ -0.35
USP39-217ENST00000491659 ZNF81P51508 661 aa12.88□□□□□ -0.35
USP39-217ENST00000491659 HMGA2P52926 109 aa12.88□□□□□ -0.35
USP39-217ENST00000491659 TRIP10Q15642 601 aa12.88□□□□□ -0.35
USP39-217ENST00000491659 KCNMB1Q16558 191 aa12.88□□□□□ -0.35
USP39-217ENST00000491659 ZMAT1Q5H9K5 638 aa12.88□□□□□ -0.35
USP39-217ENST00000491659 CLEC12AQ5QGZ9 265 aa12.88□□□□□ -0.35
USP39-217ENST00000491659 OTPQ5XKR4 325 aa12.88□□□□□ -0.35
USP39-217ENST00000491659 SDR9C7Q8NEX9 313 aa12.88□□□□□ -0.35
USP39-217ENST00000491659 YIPF5Q969M3 257 aa12.88□□□□□ -0.35
USP39-217ENST00000491659 TSSK2Q96PF2 358 aa12.88□□□□□ -0.35
USP39-217ENST00000491659 BTBD10Q9BSF8 475 aa12.88□□□□□ -0.35
USP39-217ENST00000491659 SHARPINQ9H0F6 387 aa12.88□□□□□ -0.35
USP39-217ENST00000491659 EGLN3Q9H6Z9 239 aa12.88□□□□□ -0.35
USP39-217ENST00000491659 SAP30LQ9HAJ7 183 aa12.88□□□□□ -0.35
USP39-217ENST00000491659 RPRD1BQ9NQG5 326 aaKnown RBP12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms