RNA–Protein interactions for RNA: ENST00000491581.5

HDAC3-211, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-211ENST00000491581 THRBP10828 461 aa7.52□□□□□ -1.21
HDAC3-211ENST00000491581 MSR1P21757 451 aa7.52□□□□□ -1.21
HDAC3-211ENST00000491581 GCH1P30793 250 aa7.52□□□□□ -1.21
HDAC3-211ENST00000491581 MDH1P40925 334 aaKnown RBP7.52□□□□□ -1.21
HDAC3-211ENST00000491581 RPS27P42677 84 aaKnown RBP7.52□□□□□ -1.21
HDAC3-211ENST00000491581 OMPP47874 163 aa7.52□□□□□ -1.21
HDAC3-211ENST00000491581 HTR5AP47898 357 aa7.52□□□□□ -1.21
HDAC3-211ENST00000491581 LIMS1P48059 325 aa7.52□□□□□ -1.21
HDAC3-211ENST00000491581 TMEM33P57088 247 aa7.52□□□□□ -1.21
HDAC3-211ENST00000491581 PSME3P61289 254 aa7.52□□□□□ -1.21
HDAC3-211ENST00000491581 PPP1R8Q12972 351 aaKnown RBP7.52□□□□□ -1.21
HDAC3-211ENST00000491581 KRR1Q13601 381 aaKnown RBP7.52□□□□□ -1.21
HDAC3-211ENST00000491581 MAPRE2Q15555 327 aa7.52□□□□□ -1.21
HDAC3-211ENST00000491581 ZNF718Q3SXZ3 478 aa7.52□□□□□ -1.21
HDAC3-211ENST00000491581 ZBED5Q49AG3 693 aa7.52□□□□□ -1.21
HDAC3-211ENST00000491581 VASH1Q7L8A9 365 aaPredicted RBP7.52□□□□□ -1.21
HDAC3-211ENST00000491581 LINC00346Q8IVM7 164 aa7.52□□□□□ -1.21
HDAC3-211ENST00000491581 RFLNBQ8N5W9 214 aa7.52□□□□□ -1.21
HDAC3-211ENST00000491581 OR2Z1Q8NG97 314 aa7.52□□□□□ -1.21
HDAC3-211ENST00000491581 OR10AD1Q8NGE0 317 aa7.52□□□□□ -1.21
HDAC3-211ENST00000491581 OR1J2Q8NGS2 313 aa7.52□□□□□ -1.21
HDAC3-211ENST00000491581 OR51F2Q8NH61 342 aa7.52□□□□□ -1.21
HDAC3-211ENST00000491581 RP9Q8TA86 221 aaKnown RBP7.52□□□□□ -1.21
HDAC3-211ENST00000491581 ITLN1Q8WWA0 313 aa7.52□□□□□ -1.21
HDAC3-211ENST00000491581 ZNRF4Q8WWF5 429 aa7.52□□□□□ -1.21
HDAC3-211ENST00000491581 CMBLQ96DG6 245 aa7.52□□□□□ -1.21
HDAC3-211ENST00000491581 C7orf34Q96L11 122 aa7.52□□□□□ -1.21
HDAC3-211ENST00000491581 ZNF570Q96NI8 536 aa7.52□□□□□ -1.21
HDAC3-211ENST00000491581 RBP7Q96R05 134 aa7.52□□□□□ -1.21
HDAC3-211ENST00000491581 GAL3ST1Q99999 423 aa7.52□□□□□ -1.21
HDAC3-211ENST00000491581 ALG12Q9BV10 488 aa7.52□□□□□ -1.21
HDAC3-211ENST00000491581 NUAK2Q9H093 628 aa7.52□□□□□ -1.21
HDAC3-211ENST00000491581 KCNN2Q9H2S1 579 aa7.52□□□□□ -1.21
HDAC3-211ENST00000491581 SMURF2Q9HAU4 748 aa7.52□□□□□ -1.21
HDAC3-211ENST00000491581 NDUFAF4Q9P032 175 aa7.52□□□□□ -1.21
HDAC3-211ENST00000491581 ASH2LQ9UBL3 628 aa7.52□□□□□ -1.21
HDAC3-211ENST00000491581 SIGLEC7Q9Y286 467 aa7.52□□□□□ -1.21
HDAC3-211ENST00000491581 GRIP1Q9Y3R0 1128 aa7.52□□□□□ -1.21
HDAC3-211ENST00000491581 IER3IP1Q9Y5U9 82 aa7.52□□□□□ -1.21
HDAC3-211ENST00000491581 ENPP4Q9Y6X5 453 aa7.52□□□□□ -1.21
HDAC3-211ENST00000491581 ANK2Q01484 3957 aa7.52□□□□□ -1.21
HDAC3-211ENST00000491581 PRSS37A4D1T9 235 aa7.51□□□□□ -1.21
HDAC3-211ENST00000491581 NPIPB13A6NJU9 1138 aa7.51□□□□□ -1.21
HDAC3-211ENST00000491581 NPIPB4C9JG80 1138 aa7.51□□□□□ -1.21
HDAC3-211ENST00000491581 PTP4A3O75365 173 aa7.51□□□□□ -1.21
HDAC3-211ENST00000491581 ABHD16AO95870 558 aa7.51□□□□□ -1.21
HDAC3-211ENST00000491581 CYB5R3P00387 301 aaPredicted RBP7.51□□□□□ -1.21
HDAC3-211ENST00000491581 PNPP00491 289 aa7.51□□□□□ -1.21
HDAC3-211ENST00000491581 NPPAP01160 153 aa7.51□□□□□ -1.21
HDAC3-211ENST00000491581 IGF2P01344 180 aa7.51□□□□□ -1.21
HDAC3-211ENST00000491581 IFNA14P01570 189 aa7.51□□□□□ -1.21
HDAC3-211ENST00000491581 TFP02787 698 aa7.51□□□□□ -1.21
HDAC3-211ENST00000491581 HLA-DPB1P04440 258 aa7.51□□□□□ -1.21
HDAC3-211ENST00000491581 CD14P08571 375 aa7.51□□□□□ -1.21
HDAC3-211ENST00000491581 EPHA1P21709 976 aa7.51□□□□□ -1.21
HDAC3-211ENST00000491581 CFPP27918 469 aa7.51□□□□□ -1.21
HDAC3-211ENST00000491581 THBS2P35442 1172 aa7.51□□□□□ -1.21
HDAC3-211ENST00000491581 CENPAP49450 140 aa7.51□□□□□ -1.21
HDAC3-211ENST00000491581 TNFAIP6P98066 277 aaPredicted RBP7.51□□□□□ -1.21
HDAC3-211ENST00000491581 ZMYND11Q15326 602 aa7.51□□□□□ -1.21
HDAC3-211ENST00000491581 RSPO1Q2MKA7 263 aaPredicted RBP7.51□□□□□ -1.21
HDAC3-211ENST00000491581 HFEQ30201 348 aa7.51□□□□□ -1.21
HDAC3-211ENST00000491581 NRN1LQ496H8 165 aa7.51□□□□□ -1.21
HDAC3-211ENST00000491581 MBNL2Q5VZF2 373 aaKnown RBP7.51□□□□□ -1.21
HDAC3-211ENST00000491581 GLYATQ6IB77 296 aa7.51□□□□□ -1.21
HDAC3-211ENST00000491581 OR2T2Q6IF00 324 aa7.51□□□□□ -1.21
HDAC3-211ENST00000491581 ACSM5Q6NUN0 579 aa7.51□□□□□ -1.21
HDAC3-211ENST00000491581 SHQ1Q6PI26 577 aaKnown RBP7.51□□□□□ -1.21
HDAC3-211ENST00000491581 CFAP77Q6ZQR2 320 aa7.51□□□□□ -1.21
HDAC3-211ENST00000491581 TMPRSS11FQ6ZWK6 438 aa7.51□□□□□ -1.21
HDAC3-211ENST00000491581 BHLHE23Q8NDY6 225 aa7.51□□□□□ -1.21
HDAC3-211ENST00000491581 DVL3Q92997 716 aaPredicted RBP7.51□□□□□ -1.21
HDAC3-211ENST00000491581 RSRC1Q96IZ7 334 aaKnown RBP7.51□□□□□ -1.21
HDAC3-211ENST00000491581 SIGLEC11Q96RL6 698 aa7.51□□□□□ -1.21
HDAC3-211ENST00000491581 KCTD14Q9BQ13 255 aaPredicted RBP7.51□□□□□ -1.21
HDAC3-211ENST00000491581 FUZQ9BT04 418 aa7.51□□□□□ -1.21
HDAC3-211ENST00000491581 POLR2J2Q9GZM3 115 aaKnown RBP7.51□□□□□ -1.21
HDAC3-211ENST00000491581 POLR2J3Q9H1A7 115 aaKnown RBP7.51□□□□□ -1.21
HDAC3-211ENST00000491581 MYLK2Q9H1R3 596 aa7.51□□□□□ -1.21
HDAC3-211ENST00000491581 LRMDAQ9H2I8 198 aa7.51□□□□□ -1.21
HDAC3-211ENST00000491581 C1orf198Q9H425 327 aa7.51□□□□□ -1.21
HDAC3-211ENST00000491581 CCDC134Q9H6E4 229 aa7.51□□□□□ -1.21
HDAC3-211ENST00000491581 SRA1Q9HD15 236 aaKnown RBP7.51□□□□□ -1.21
HDAC3-211ENST00000491581 SLCO1C1Q9NYB5 712 aa7.51□□□□□ -1.21
HDAC3-211ENST00000491581 EIF3KQ9UBQ5 218 aaKnown RBP7.51□□□□□ -1.21
HDAC3-211ENST00000491581 GRHPRQ9UBQ7 328 aa7.51□□□□□ -1.21
HDAC3-211ENST00000491581 PURGQ9UJV8 347 aaKnown RBP7.51□□□□□ -1.21
HDAC3-211ENST00000491581 FBXL3Q9UKT7 428 aa7.51□□□□□ -1.21
HDAC3-211ENST00000491581 PPIAL4AQ9Y536 164 aa7.51□□□□□ -1.21
HDAC3-211ENST00000491581 TIMM10BQ9Y5J6 103 aa7.51□□□□□ -1.21
HDAC3-211ENST00000491581 STAB1Q9NY15 2570 aa7.51□□□□□ -1.21
HDAC3-211ENST00000491581 TRAV20A0A0B4J274 112 aa7.5□□□□□ -1.21
HDAC3-211ENST00000491581 MDFIC2A0A1B0GVS7 189 aa7.5□□□□□ -1.21
HDAC3-211ENST00000491581 CENPBD1B2RD01 187 aa7.5□□□□□ -1.21
HDAC3-211ENST00000491581 MLNRO43193 412 aa7.5□□□□□ -1.21
HDAC3-211ENST00000491581 SGCEO43556 437 aa7.5□□□□□ -1.21
HDAC3-211ENST00000491581 PTHP01270 115 aa7.5□□□□□ -1.21
HDAC3-211ENST00000491581 IGHV2-70P01814 119 aa7.5□□□□□ -1.21
HDAC3-211ENST00000491581 H1F0P07305 194 aaKnown RBP7.5□□□□□ -1.21
HDAC3-211ENST00000491581 PMELP40967 661 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms