RNA–Protein interactions for RNA: ENST00000491334.1

CDK5RAP2-218, Transcript of CDK5 regulatory subunit associated protein 2, human

TSL 2

Gene CDK5RAP2, Length 546 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP2-218	ENST00000491334	UGT2A1	Q9Y4X1	527 aa		16.03	■□□□□ 0.16
CDK5RAP2-218	ENST00000491334	NOTCH3	Q9UM47	2321 aa		16.02	■□□□□ 0.16
CDK5RAP2-218	ENST00000491334	TRPC5OS	A6NMA1	111 aa		16.02	■□□□□ 0.16
CDK5RAP2-218	ENST00000491334	ENSA	O43768	121 aa	Known RBP	16.02	■□□□□ 0.16
CDK5RAP2-218	ENST00000491334	SLC2A10	O95528	541 aa		16.02	■□□□□ 0.16
CDK5RAP2-218	ENST00000491334	ABHD16A	O95870	558 aa		16.02	■□□□□ 0.16
CDK5RAP2-218	ENST00000491334	OPN1MW	P04001	364 aa		16.02	■□□□□ 0.16
CDK5RAP2-218	ENST00000491334	F13B	P05160	661 aa		16.02	■□□□□ 0.16
CDK5RAP2-218	ENST00000491334	OPN1MW2	P0DN77	364 aa		16.02	■□□□□ 0.16
CDK5RAP2-218	ENST00000491334	OPN1MW3	P0DN78	364 aa		16.02	■□□□□ 0.16
CDK5RAP2-218	ENST00000491334	POLR2J	P52435	117 aa	Known RBP	16.02	■□□□□ 0.16
CDK5RAP2-218	ENST00000491334	BST1	Q10588	318 aa		16.02	■□□□□ 0.16
CDK5RAP2-218	ENST00000491334	NXN	Q6DKJ4	435 aa		16.02	■□□□□ 0.16
CDK5RAP2-218	ENST00000491334	ARMC8	Q8IUR7	673 aa		16.02	■□□□□ 0.16
CDK5RAP2-218	ENST00000491334	ASB10	Q8WXI3	467 aa		16.02	■□□□□ 0.16
CDK5RAP2-218	ENST00000491334	NSMAF	Q92636	917 aa		16.02	■□□□□ 0.16
CDK5RAP2-218	ENST00000491334	GTF2H4	Q92759	462 aa		16.02	■□□□□ 0.16
CDK5RAP2-218	ENST00000491334	PPP1R14A	Q96A00	147 aa		16.02	■□□□□ 0.16
CDK5RAP2-218	ENST00000491334	HAVCR1	Q96D42	359 aa		16.02	■□□□□ 0.16
CDK5RAP2-218	ENST00000491334	TBCCD1	Q9NVR7	557 aa		16.02	■□□□□ 0.16
CDK5RAP2-218	ENST00000491334	GMNC	A6NCL1	334 aa		16.01	■□□□□ 0.15
CDK5RAP2-218	ENST00000491334	LRRC30	A6NM36	301 aa		16.01	■□□□□ 0.15
CDK5RAP2-218	ENST00000491334	LIPF	P07098	398 aa		16.01	■□□□□ 0.15
CDK5RAP2-218	ENST00000491334	CST2	P09228	141 aa		16.01	■□□□□ 0.15
CDK5RAP2-218	ENST00000491334	NR2C1	P13056	603 aa		16.01	■□□□□ 0.15
CDK5RAP2-218	ENST00000491334	SLC6A2	P23975	617 aa		16.01	■□□□□ 0.15
CDK5RAP2-218	ENST00000491334	UGT2B15	P54855	530 aa		16.01	■□□□□ 0.15
CDK5RAP2-218	ENST00000491334	PCBP3	P57721	371 aa	Known RBP	16.01	■□□□□ 0.15
CDK5RAP2-218	ENST00000491334	RUNDC3A	Q59EK9	446 aa		16.01	■□□□□ 0.15
CDK5RAP2-218	ENST00000491334	VAX1	Q5SQQ9	334 aa		16.01	■□□□□ 0.15
CDK5RAP2-218	ENST00000491334	WDR25	Q64LD2	544 aa	Predicted RBP	16.01	■□□□□ 0.15
CDK5RAP2-218	ENST00000491334	GOLGA6L1	Q8N7Z2	621 aa		16.01	■□□□□ 0.15
CDK5RAP2-218	ENST00000491334	DPAGT1	Q9H3H5	408 aa		16.01	■□□□□ 0.15
CDK5RAP2-218	ENST00000491334	NDRG4	Q9ULP0	352 aa	Known RBP	16.01	■□□□□ 0.15
CDK5RAP2-218	ENST00000491334	CENPVL3	A0A0U1RRI6	287 aa		16	■□□□□ 0.15
CDK5RAP2-218	ENST00000491334		H0YL77	283 aa		16	■□□□□ 0.15
CDK5RAP2-218	ENST00000491334	KPNA4	O00629	521 aa	Predicted RBP	16	■□□□□ 0.15
CDK5RAP2-218	ENST00000491334	PHYH	O14832	338 aa		16	■□□□□ 0.15
CDK5RAP2-218	ENST00000491334	HDAC3	O15379	428 aa		16	■□□□□ 0.15
CDK5RAP2-218	ENST00000491334	TOX4	O94842	621 aa		16	■□□□□ 0.15
CDK5RAP2-218	ENST00000491334	CYB5R3	P00387	301 aa	Predicted RBP	16	■□□□□ 0.15
CDK5RAP2-218	ENST00000491334	IGHV4-59	P01825	116 aa		16	■□□□□ 0.15
CDK5RAP2-218	ENST00000491334	VIM	P08670	466 aa	Known RBP	16	■□□□□ 0.15
CDK5RAP2-218	ENST00000491334	LAP3	P28838	519 aa		16	■□□□□ 0.15
CDK5RAP2-218	ENST00000491334	IER3	P46695	156 aa		16	■□□□□ 0.15
CDK5RAP2-218	ENST00000491334	ZNF404	Q494X3	552 aa		16	■□□□□ 0.15
CDK5RAP2-218	ENST00000491334	ENTPD8	Q5MY95	495 aa		16	■□□□□ 0.15
CDK5RAP2-218	ENST00000491334		Q6ZSV7	163 aa		16	■□□□□ 0.15
CDK5RAP2-218	ENST00000491334	C1orf87	Q8N0U7	546 aa		16	■□□□□ 0.15
CDK5RAP2-218	ENST00000491334	ZNF420	Q8TAQ5	688 aa	Predicted RBP	16	■□□□□ 0.15
CDK5RAP2-218	ENST00000491334	DGCR8	Q8WYQ5	773 aa	Known RBP eCLIP	16	■□□□□ 0.15
CDK5RAP2-218	ENST00000491334	LRTOMT	Q8WZ04	291 aa		16	■□□□□ 0.15
CDK5RAP2-218	ENST00000491334	PTP4A1	Q93096	173 aa		16	■□□□□ 0.15
CDK5RAP2-218	ENST00000491334	MPP4	Q96JB8	637 aa		16	■□□□□ 0.15
CDK5RAP2-218	ENST00000491334	COG8	Q96MW5	612 aa		16	■□□□□ 0.15
CDK5RAP2-218	ENST00000491334	CDADC1	Q9BWV3	514 aa		16	■□□□□ 0.15
CDK5RAP2-218	ENST00000491334	SDR39U1	Q9NRG7	319 aa	Predicted RBP	16	■□□□□ 0.15
CDK5RAP2-218	ENST00000491334	INIP	Q9NRY2	104 aa		16	■□□□□ 0.15
CDK5RAP2-218	ENST00000491334	CPSF4L	A6NMK7	179 aa	Known RBP	15.99	■□□□□ 0.15
CDK5RAP2-218	ENST00000491334	ZNF879	B4DU55	563 aa		15.99	■□□□□ 0.15
CDK5RAP2-218	ENST00000491334	BGN	P21810	368 aa		15.99	■□□□□ 0.15
CDK5RAP2-218	ENST00000491334	CFHR2	P36980	270 aa		15.99	■□□□□ 0.15
CDK5RAP2-218	ENST00000491334	SRP9	P49458	86 aa	Known RBP	15.99	■□□□□ 0.15
CDK5RAP2-218	ENST00000491334	GUCY1A3	Q02108	690 aa		15.99	■□□□□ 0.15
CDK5RAP2-218	ENST00000491334	RPL18	Q07020	188 aa	Known RBP	15.99	■□□□□ 0.15
CDK5RAP2-218	ENST00000491334	CD47	Q08722	323 aa		15.99	■□□□□ 0.15
CDK5RAP2-218	ENST00000491334	SCARB2	Q14108	478 aa		15.99	■□□□□ 0.15
CDK5RAP2-218	ENST00000491334	ZNF181	Q2M3W8	571 aa		15.99	■□□□□ 0.15
CDK5RAP2-218	ENST00000491334	CD276	Q5ZPR3	534 aa		15.99	■□□□□ 0.15
CDK5RAP2-218	ENST00000491334	C10orf82	Q8WW14	230 aa		15.99	■□□□□ 0.15
CDK5RAP2-218	ENST00000491334	RBP7	Q96R05	134 aa		15.99	■□□□□ 0.15
CDK5RAP2-218	ENST00000491334	TENM3	Q9P273	2699 aa		15.99	■□□□□ 0.15
CDK5RAP2-218	ENST00000491334	SFTPB	P07988	381 aa		15.98	■□□□□ 0.15
CDK5RAP2-218	ENST00000491334	PPIB	P23284	216 aa	Known RBP	15.98	■□□□□ 0.15
CDK5RAP2-218	ENST00000491334	AQP1	P29972	269 aa		15.98	■□□□□ 0.15
CDK5RAP2-218	ENST00000491334	ARMC4	Q5T2S8	1044 aa		15.98	■□□□□ 0.15
CDK5RAP2-218	ENST00000491334	SLC2A7	Q6PXP3	512 aa		15.98	■□□□□ 0.15
CDK5RAP2-218	ENST00000491334	SLC25A47	Q6Q0C1	308 aa		15.98	■□□□□ 0.15
CDK5RAP2-218	ENST00000491334	DCDC5	Q6ZRR9	648 aa		15.98	■□□□□ 0.15
CDK5RAP2-218	ENST00000491334	SYT9	Q86SS6	491 aa		15.98	■□□□□ 0.15
CDK5RAP2-218	ENST00000491334	LDLRAD3	Q86YD5	345 aa		15.98	■□□□□ 0.15
CDK5RAP2-218	ENST00000491334	OR13G1	Q8NGZ3	307 aa		15.98	■□□□□ 0.15
CDK5RAP2-218	ENST00000491334	ADAMTS16	Q8TE57	1224 aa		15.98	■□□□□ 0.15
CDK5RAP2-218	ENST00000491334	NMD3	Q96D46	503 aa	Known RBP	15.98	■□□□□ 0.15
CDK5RAP2-218	ENST00000491334	MEGF10	Q96KG7	1140 aa		15.98	■□□□□ 0.15
CDK5RAP2-218	ENST00000491334	POFUT1	Q9H488	388 aa		15.98	■□□□□ 0.15
CDK5RAP2-218	ENST00000491334	TMEM38A	Q9H6F2	299 aa		15.98	■□□□□ 0.15
CDK5RAP2-218	ENST00000491334	SLC7A7	Q9UM01	511 aa		15.98	■□□□□ 0.15
CDK5RAP2-218	ENST00000491334	STARD10	Q9Y365	291 aa		15.98	■□□□□ 0.15
CDK5RAP2-218	ENST00000491334	PLXNB1	O43157	2135 aa		15.98	■□□□□ 0.15
CDK5RAP2-218	ENST00000491334	IGKV1D-43	A0A0B4J1Z2	117 aa		15.97	■□□□□ 0.15
CDK5RAP2-218	ENST00000491334	IGHV1-69D	A0A0B4J2H0	117 aa		15.97	■□□□□ 0.15
CDK5RAP2-218	ENST00000491334	ZNF816-ZNF321P	A0A0X1KG74	233 aa		15.97	■□□□□ 0.15
CDK5RAP2-218	ENST00000491334	TRAPPC13	A5PLN9	417 aa		15.97	■□□□□ 0.15
CDK5RAP2-218	ENST00000491334	C12orf71	A8MTZ7	269 aa		15.97	■□□□□ 0.15
CDK5RAP2-218	ENST00000491334		M0R3H8	397 aa		15.97	■□□□□ 0.15
CDK5RAP2-218	ENST00000491334	TSPAN9	O75954	239 aa		15.97	■□□□□ 0.15
CDK5RAP2-218	ENST00000491334	IGHV1-69	P01742	117 aa		15.97	■□□□□ 0.15
CDK5RAP2-218	ENST00000491334	COX5B	P10606	129 aa		15.97	■□□□□ 0.15
CDK5RAP2-218	ENST00000491334	RAC2	P15153	192 aa		15.97	■□□□□ 0.15

Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms