RNA–Protein interactions for RNA: ENST00000490557.1

HMGB1P38-201, Transcript of high mobility group box 1 pseudogene 38, humanhuman

BASIC

Gene HMGB1P38, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P38-201ENST00000490557 TSPAN13O95857 204 aa3.21□□□□□ -1.9
HMGB1P38-201ENST00000490557 INSP01308 110 aa3.21□□□□□ -1.9
HMGB1P38-201ENST00000490557 IGHV4-34P06331 123 aa3.21□□□□□ -1.9
HMGB1P38-201ENST00000490557 KRT7P08729 469 aa3.21□□□□□ -1.9
HMGB1P38-201ENST00000490557 KRT16P08779 473 aa3.21□□□□□ -1.9
HMGB1P38-201ENST00000490557 RBMY1CP0DJD4 496 aa3.21□□□□□ -1.9
HMGB1P38-201ENST00000490557 SYT1P21579 422 aa3.21□□□□□ -1.9
HMGB1P38-201ENST00000490557 BGNP21810 368 aa3.21□□□□□ -1.9
HMGB1P38-201ENST00000490557 HTR2CP28335 458 aa3.21□□□□□ -1.9
HMGB1P38-201ENST00000490557 HTR1FP30939 366 aa3.21□□□□□ -1.9
HMGB1P38-201ENST00000490557 NSG1P42857 185 aa3.21□□□□□ -1.9
HMGB1P38-201ENST00000490557 HNRNPA3P51991 378 aaKnown RBP3.21□□□□□ -1.9
HMGB1P38-201ENST00000490557 EMP2P54851 167 aa3.21□□□□□ -1.9
HMGB1P38-201ENST00000490557 PKNOX1P55347 436 aa3.21□□□□□ -1.9
HMGB1P38-201ENST00000490557 OR2B6P58173 313 aa3.21□□□□□ -1.9
HMGB1P38-201ENST00000490557 ADARB1P78563 741 aaKnown RBP3.21□□□□□ -1.9
HMGB1P38-201ENST00000490557 MRPS22P82650 360 aaKnown RBP3.21□□□□□ -1.9
HMGB1P38-201ENST00000490557 SARNPP82979 210 aaKnown RBP3.21□□□□□ -1.9
HMGB1P38-201ENST00000490557 IFFO1Q0D2I5 559 aa3.21□□□□□ -1.9
HMGB1P38-201ENST00000490557 SCRN3Q0VDG4 424 aa3.21□□□□□ -1.9
HMGB1P38-201ENST00000490557 DAZ2Q13117 558 aaKnown RBP3.21□□□□□ -1.9
HMGB1P38-201ENST00000490557 EIF4EBP2Q13542 120 aaPredicted RBP3.21□□□□□ -1.9
HMGB1P38-201ENST00000490557 UAP1Q16222 522 aaPredicted RBP3.21□□□□□ -1.9
HMGB1P38-201ENST00000490557 C5orf47Q569G3 176 aa3.21□□□□□ -1.9
HMGB1P38-201ENST00000490557 SOHLH1Q5JUK2 328 aa3.21□□□□□ -1.9
HMGB1P38-201ENST00000490557 TIGD3Q6B0B8 471 aa3.21□□□□□ -1.9
HMGB1P38-201ENST00000490557 PRMT9Q6P2P2 845 aa3.21□□□□□ -1.9
HMGB1P38-201ENST00000490557 FAM151BQ6UXP7 276 aa3.21□□□□□ -1.9
HMGB1P38-201ENST00000490557 ZNF621Q6ZSS3 439 aa3.21□□□□□ -1.9
HMGB1P38-201ENST00000490557 GDPD3Q7L5L3 318 aa3.21□□□□□ -1.9
HMGB1P38-201ENST00000490557 PAGE2Q7Z2X7 111 aa3.21□□□□□ -1.9
HMGB1P38-201ENST00000490557 ZNF546Q86UE3 836 aa3.21□□□□□ -1.9
HMGB1P38-201ENST00000490557 SYS1Q8N2H4 156 aa3.21□□□□□ -1.9
HMGB1P38-201ENST00000490557 Q8N9L7 120 aa3.21□□□□□ -1.9
HMGB1P38-201ENST00000490557 SUMF2Q8NBJ7 301 aa3.21□□□□□ -1.9
HMGB1P38-201ENST00000490557 OR8J2Q8NGG1 315 aa3.21□□□□□ -1.9
HMGB1P38-201ENST00000490557 FANK1Q8TC84 345 aa3.21□□□□□ -1.9
HMGB1P38-201ENST00000490557 RDH5Q92781 318 aa3.21□□□□□ -1.9
HMGB1P38-201ENST00000490557 PPP1R14BQ96C90 147 aa3.21□□□□□ -1.9
HMGB1P38-201ENST00000490557 RNF2Q99496 336 aa3.21□□□□□ -1.9
HMGB1P38-201ENST00000490557 HIST1H4GQ99525 98 aa3.21□□□□□ -1.9
HMGB1P38-201ENST00000490557 ECSITQ9BQ95 431 aa3.21□□□□□ -1.9
HMGB1P38-201ENST00000490557 NAT9Q9BTE0 207 aa3.21□□□□□ -1.9
HMGB1P38-201ENST00000490557 ULBP2Q9BZM5 246 aa3.21□□□□□ -1.9
HMGB1P38-201ENST00000490557 ACTR3CQ9C0K3 210 aaPredicted RBP3.21□□□□□ -1.9
HMGB1P38-201ENST00000490557 SRRQ9GZT4 340 aa3.21□□□□□ -1.9
HMGB1P38-201ENST00000490557 KIR3DX1Q9H7L2 352 aa3.21□□□□□ -1.9
HMGB1P38-201ENST00000490557 ZNF331Q9NQX6 463 aaPredicted RBP3.21□□□□□ -1.9
HMGB1P38-201ENST00000490557 DAZ3Q9NR90 486 aaKnown RBP3.21□□□□□ -1.9
HMGB1P38-201ENST00000490557 MMP26Q9NRE1 261 aa3.21□□□□□ -1.9
HMGB1P38-201ENST00000490557 STMN3Q9NZ72 180 aa3.21□□□□□ -1.9
HMGB1P38-201ENST00000490557 MRM2Q9UI43 246 aaKnown RBP3.21□□□□□ -1.9
HMGB1P38-201ENST00000490557 SCML1Q9UN30 329 aa3.21□□□□□ -1.9
HMGB1P38-201ENST00000490557 CACNG2Q9Y698 323 aa3.21□□□□□ -1.9
HMGB1P38-201ENST00000490557 URGCP-MRPS24S4R325 110 aa3.21□□□□□ -1.9
HMGB1P38-201ENST00000490557 V9GY05 133 aa3.21□□□□□ -1.9
HMGB1P38-201ENST00000490557 THSD7BQ9C0I4 1608 aa3.21□□□□□ -1.9
HMGB1P38-201ENST00000490557 AQRO60306 1485 aaKnown RBP eCLIP3.21□□□□□ -1.9
HMGB1P38-201ENST00000490557 IGHV3OR16-13A0A075B7E8 117 aa3.2□□□□□ -1.9
HMGB1P38-201ENST00000490557 A0A1B0GUS0 222 aa3.2□□□□□ -1.9
HMGB1P38-201ENST00000490557 A0A1W2PRF3 423 aa3.2□□□□□ -1.9
HMGB1P38-201ENST00000490557 A0A1W2PRM7 423 aa3.2□□□□□ -1.9
HMGB1P38-201ENST00000490557 TCRBV9S1A1TA0A576 114 aa3.2□□□□□ -1.9
HMGB1P38-201ENST00000490557 PSMB11A5LHX3 300 aa3.2□□□□□ -1.9
HMGB1P38-201ENST00000490557 GJE1A6NN92 205 aa3.2□□□□□ -1.9
HMGB1P38-201ENST00000490557 VGLL3A8MV65 326 aa3.2□□□□□ -1.9
HMGB1P38-201ENST00000490557 PRAMEF26H0Y7S4 382 aa3.2□□□□□ -1.9
HMGB1P38-201ENST00000490557 SMLR1H3BR10 107 aa3.2□□□□□ -1.9
HMGB1P38-201ENST00000490557 GOSR2O14653 212 aa3.2□□□□□ -1.9
HMGB1P38-201ENST00000490557 LIN7AO14910 233 aaPredicted RBP3.2□□□□□ -1.9
HMGB1P38-201ENST00000490557 RAD51BO15315 384 aa3.2□□□□□ -1.9
HMGB1P38-201ENST00000490557 TRAPPC3O43617 180 aa3.2□□□□□ -1.9
HMGB1P38-201ENST00000490557 IGHG4P01861 327 aa3.2□□□□□ -1.9
HMGB1P38-201ENST00000490557 PSG2P11465 335 aa3.2□□□□□ -1.9
HMGB1P38-201ENST00000490557 PSMC3P17980 439 aa3.2□□□□□ -1.9
HMGB1P38-201ENST00000490557 PGAM1P18669 254 aa3.2□□□□□ -1.9
HMGB1P38-201ENST00000490557 POLR2EP19388 210 aaKnown RBP3.2□□□□□ -1.9
HMGB1P38-201ENST00000490557 NPR2P20594 1047 aa3.2□□□□□ -1.9
HMGB1P38-201ENST00000490557 HOXA9P31269 272 aa3.2□□□□□ -1.9
HMGB1P38-201ENST00000490557 CSKP41240 450 aa3.2□□□□□ -1.9
HMGB1P38-201ENST00000490557 TNFSF9P41273 254 aa3.2□□□□□ -1.9
HMGB1P38-201ENST00000490557 VBP1P61758 197 aa3.2□□□□□ -1.9
HMGB1P38-201ENST00000490557 SLAMF1Q13291 335 aa3.2□□□□□ -1.9
HMGB1P38-201ENST00000490557 TSC22D1Q15714 1073 aa3.2□□□□□ -1.9
HMGB1P38-201ENST00000490557 THEM4Q5T1C6 240 aa3.2□□□□□ -1.9
HMGB1P38-201ENST00000490557 STX12Q86Y82 276 aa3.2□□□□□ -1.9
HMGB1P38-201ENST00000490557 CRLF3Q8IUI8 442 aa3.2□□□□□ -1.9
HMGB1P38-201ENST00000490557 LRRC34Q8IZ02 419 aa3.2□□□□□ -1.9
HMGB1P38-201ENST00000490557 FTMTQ8N4E7 242 aa3.2□□□□□ -1.9
HMGB1P38-201ENST00000490557 FAM71E2Q8N5Q1 922 aa3.2□□□□□ -1.9
HMGB1P38-201ENST00000490557 TPRX1Q8N7U7 411 aa3.2□□□□□ -1.9
HMGB1P38-201ENST00000490557 SNX31Q8N9S9 440 aa3.2□□□□□ -1.9
HMGB1P38-201ENST00000490557 NECAP1Q8NC96 275 aa3.2□□□□□ -1.9
HMGB1P38-201ENST00000490557 OR52H1Q8NGJ2 320 aa3.2□□□□□ -1.9
HMGB1P38-201ENST00000490557 OR6N2Q8NGY6 317 aa3.2□□□□□ -1.9
HMGB1P38-201ENST00000490557 LYPD6BQ8NI32 183 aa3.2□□□□□ -1.9
HMGB1P38-201ENST00000490557 LGALS14Q8TCE9 139 aa3.2□□□□□ -1.9
HMGB1P38-201ENST00000490557 CAPSLQ8WWF8 208 aa3.2□□□□□ -1.9
HMGB1P38-201ENST00000490557 SMARCD2Q92925 531 aa3.2□□□□□ -1.9
HMGB1P38-201ENST00000490557 MYDGFQ969H8 173 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms