RNA–Protein interactions for RNA: ENST00000490207.5

SMC4-222, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-222ENST00000490207 FAM166AQ6J272 317 aa16.88■□□□□ 0.29
SMC4-222ENST00000490207 LCN8Q6JVE9 175 aa16.88■□□□□ 0.29
SMC4-222ENST00000490207 C1orf94Q6P1W5 598 aa16.88■□□□□ 0.29
SMC4-222ENST00000490207 PGBD2Q6P3X8 592 aa16.88■□□□□ 0.29
SMC4-222ENST00000490207 DNM1P34Q6PK57 102 aa16.88■□□□□ 0.29
SMC4-222ENST00000490207 C1orf174Q8IYL3 243 aa16.88■□□□□ 0.29
SMC4-222ENST00000490207 GNPDA2Q8TDQ7 276 aa16.88■□□□□ 0.29
SMC4-222ENST00000490207 MSI2Q96DH6 328 aaKnown RBP16.88■□□□□ 0.29
SMC4-222ENST00000490207 MARS2Q96GW9 593 aaKnown RBP16.88■□□□□ 0.29
SMC4-222ENST00000490207 SNX18Q96RF0 628 aa16.88■□□□□ 0.29
SMC4-222ENST00000490207 IFT27Q9BW83 186 aa16.88■□□□□ 0.29
SMC4-222ENST00000490207 OR2J1Q9GZK6 312 aa16.88■□□□□ 0.29
SMC4-222ENST00000490207 ELOVL3Q9HB03 270 aa16.88■□□□□ 0.29
SMC4-222ENST00000490207 KCNS2Q9ULS6 477 aa16.88■□□□□ 0.29
SMC4-222ENST00000490207 POLR1DQ9Y2S0 133 aa16.88■□□□□ 0.29
SMC4-222ENST00000490207 LYVE1Q9Y5Y7 322 aa16.88■□□□□ 0.29
SMC4-222ENST00000490207 LOC100289279A0A1B0GTE1 492 aa16.87■□□□□ 0.29
SMC4-222ENST00000490207 H3BSA7 217 aa16.87■□□□□ 0.29
SMC4-222ENST00000490207 LMX1BO60663 402 aa16.87■□□□□ 0.29
SMC4-222ENST00000490207 KRT36O76013 467 aa16.87■□□□□ 0.29
SMC4-222ENST00000490207 ABHD16AO95870 558 aa16.87■□□□□ 0.29
SMC4-222ENST00000490207 COL8A2P25067 703 aa16.87■□□□□ 0.29
SMC4-222ENST00000490207 MAGEA2P43356 314 aa16.87■□□□□ 0.29
SMC4-222ENST00000490207 GPR6P46095 362 aaPredicted RBP16.87■□□□□ 0.29
SMC4-222ENST00000490207 ARHGDIAP52565 204 aa16.87■□□□□ 0.29
SMC4-222ENST00000490207 LSM6P62312 80 aaKnown RBP16.87■□□□□ 0.29
SMC4-222ENST00000490207 MRPS11P82912 194 aaKnown RBP16.87■□□□□ 0.29
SMC4-222ENST00000490207 TSPAN31Q12999 210 aa16.87■□□□□ 0.29
SMC4-222ENST00000490207 MBNL2Q5VZF2 373 aaKnown RBP16.87■□□□□ 0.29
SMC4-222ENST00000490207 LEG1Q6P5S2 330 aa16.87■□□□□ 0.29
SMC4-222ENST00000490207 ARL9Q6T311 187 aa16.87■□□□□ 0.29
SMC4-222ENST00000490207 ZNF620Q6ZNG0 422 aa16.87■□□□□ 0.29
SMC4-222ENST00000490207 VASH1Q7L8A9 365 aaPredicted RBP16.87■□□□□ 0.29
SMC4-222ENST00000490207 DHFR2Q86XF0 187 aa16.87■□□□□ 0.29
SMC4-222ENST00000490207 GTF3AQ92664 365 aaKnown RBP16.87■□□□□ 0.29
SMC4-222ENST00000490207 YIPF5Q969M3 257 aa16.87■□□□□ 0.29
SMC4-222ENST00000490207 C4orf45Q96LM5 186 aa16.87■□□□□ 0.29
SMC4-222ENST00000490207 SAMD8Q96LT4 415 aa16.87■□□□□ 0.29
SMC4-222ENST00000490207 MAGIXQ9H6Y5 334 aa16.87■□□□□ 0.29
SMC4-222ENST00000490207 PLEK2Q9NYT0 353 aa16.87■□□□□ 0.29
SMC4-222ENST00000490207 ASH2LQ9UBL3 628 aa16.87■□□□□ 0.29
SMC4-222ENST00000490207 CDC42EP3Q9UKI2 254 aa16.87■□□□□ 0.29
SMC4-222ENST00000490207 PRPF19Q9UMS4 504 aaKnown RBP16.87■□□□□ 0.29
SMC4-222ENST00000490207 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.87■□□□□ 0.291e-10■■■■□ 23.3
SMC4-222ENST00000490207 TNFRSF11BO00300 401 aa16.86■□□□□ 0.29
SMC4-222ENST00000490207 ARPC3O15145 178 aa16.86■□□□□ 0.29
SMC4-222ENST00000490207 MPZL1O95297 269 aa16.86■□□□□ 0.29
SMC4-222ENST00000490207 RENP00797 406 aa16.86■□□□□ 0.29
SMC4-222ENST00000490207 NGFP01138 241 aa16.86■□□□□ 0.29
SMC4-222ENST00000490207 T-ENOLP0DO92 83 aa16.86■□□□□ 0.29
SMC4-222ENST00000490207 CRABP1P29762 137 aa16.86■□□□□ 0.29
SMC4-222ENST00000490207 IL2RGP31785 369 aa16.86■□□□□ 0.29
SMC4-222ENST00000490207 CENPAP49450 140 aa16.86■□□□□ 0.29
SMC4-222ENST00000490207 CCL8P80075 99 aa16.86■□□□□ 0.29
SMC4-222ENST00000490207 TRIM25Q14258 630 aaKnown RBP16.86■□□□□ 0.29
SMC4-222ENST00000490207 TMEM255AQ5JRV8 349 aa16.86■□□□□ 0.29
SMC4-222ENST00000490207 OR9Q2Q8NGE9 314 aa16.86■□□□□ 0.29
SMC4-222ENST00000490207 KLF14Q8TD94 323 aaPredicted RBP16.86■□□□□ 0.29
SMC4-222ENST00000490207 HPS1Q92902 700 aa16.86■□□□□ 0.29
SMC4-222ENST00000490207 TSSK2Q96PF2 358 aa16.86■□□□□ 0.29
SMC4-222ENST00000490207 NMNAT3Q96T66 252 aa16.86■□□□□ 0.29
SMC4-222ENST00000490207 SOX7Q9BT81 388 aa16.86■□□□□ 0.29
SMC4-222ENST00000490207 ZNF275Q9NSD4 429 aaPredicted RBP16.86■□□□□ 0.29
SMC4-222ENST00000490207 NKIRAS2Q9NYR9 191 aa16.86■□□□□ 0.29
SMC4-222ENST00000490207 LPAR3Q9UBY5 353 aa16.86■□□□□ 0.29
SMC4-222ENST00000490207 GPANK1O95872 356 aa16.85■□□□□ 0.29
SMC4-222ENST00000490207 GAAP10253 952 aa16.85■□□□□ 0.29
SMC4-222ENST00000490207 HIST1H1CP16403 213 aaKnown RBP16.85■□□□□ 0.29
SMC4-222ENST00000490207 IGFBP5P24593 272 aa16.85■□□□□ 0.29
SMC4-222ENST00000490207 NOS3P29474 1203 aa16.85■□□□□ 0.29
SMC4-222ENST00000490207 CCNIQ14094 377 aa16.85■□□□□ 0.29
SMC4-222ENST00000490207 PGM2L1Q6PCE3 622 aa16.85■□□□□ 0.29
SMC4-222ENST00000490207 LINC00471Q8N535 108 aa16.85■□□□□ 0.29
SMC4-222ENST00000490207 NPEPL1Q8NDH3 523 aa16.85■□□□□ 0.29
SMC4-222ENST00000490207 OR52L1Q8NGH7 329 aa16.85■□□□□ 0.29
SMC4-222ENST00000490207 OR4K13Q8NH42 304 aa16.85■□□□□ 0.29
SMC4-222ENST00000490207 CCDC124Q96CT7 223 aaKnown RBP16.85■□□□□ 0.29
SMC4-222ENST00000490207 BTBD10Q9BSF8 475 aa16.85■□□□□ 0.29
SMC4-222ENST00000490207 CDH10Q9Y6N8 788 aa16.85■□□□□ 0.29
SMC4-222ENST00000490207 TANC2Q9HCD6 1990 aa16.85■□□□□ 0.29
SMC4-222ENST00000490207 IGLV1-36A0A0B4J1U3 117 aa16.84■□□□□ 0.29
SMC4-222ENST00000490207 PLSCR5A0PG75 271 aa16.84■□□□□ 0.29
SMC4-222ENST00000490207 DCTN6O00399 190 aa16.84■□□□□ 0.29
SMC4-222ENST00000490207 TPD52L2O43399 206 aaKnown RBP16.84■□□□□ 0.29
SMC4-222ENST00000490207 RP2O75695 350 aa16.84■□□□□ 0.29
SMC4-222ENST00000490207 ZNF81P51508 661 aa16.84■□□□□ 0.29
SMC4-222ENST00000490207 HMGA2P52926 109 aa16.84■□□□□ 0.29
SMC4-222ENST00000490207 KCNMB1Q16558 191 aa16.84■□□□□ 0.29
SMC4-222ENST00000490207 TSTQ16762 297 aaKnown RBP16.84■□□□□ 0.29
SMC4-222ENST00000490207 RPL13AP3Q6NVV1 102 aa16.84■□□□□ 0.29
SMC4-222ENST00000490207 ZSCAN2Q7Z7L9 614 aaPredicted RBP16.84■□□□□ 0.29
SMC4-222ENST00000490207 SDR9C7Q8NEX9 313 aa16.84■□□□□ 0.29
SMC4-222ENST00000490207 OR4C15Q8NGM1 316 aa16.84■□□□□ 0.29
SMC4-222ENST00000490207 BEX2Q9BXY8 128 aa16.84■□□□□ 0.29
SMC4-222ENST00000490207 TRIM15Q9C019 465 aa16.84■□□□□ 0.29
SMC4-222ENST00000490207 SHARPINQ9H0F6 387 aa16.84■□□□□ 0.29
SMC4-222ENST00000490207 RACGAP1Q9H0H5 632 aa16.84■□□□□ 0.29
SMC4-222ENST00000490207 FN3KQ9H479 309 aa16.84■□□□□ 0.29
SMC4-222ENST00000490207 NARFLQ9H6Q4 476 aa16.84■□□□□ 0.29
SMC4-222ENST00000490207 EGLN3Q9H6Z9 239 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms