RNA–Protein interactions for RNA: ENST00000489927.1

PLOD3-216, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 562 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-216ENST00000489927 MSR1P21757 451 aa13.35□□□□□ -0.27
PLOD3-216ENST00000489927 FUT4P22083 530 aa13.35□□□□□ -0.27
PLOD3-216ENST00000489927 TNFSF4P23510 183 aa13.35□□□□□ -0.27
PLOD3-216ENST00000489927 CTXN1P60606 82 aa13.35□□□□□ -0.27
PLOD3-216ENST00000489927 CYLC2Q14093 348 aaPredicted RBP13.35□□□□□ -0.27
PLOD3-216ENST00000489927 Q6ZR03 302 aa13.35□□□□□ -0.27
PLOD3-216ENST00000489927 SYT9Q86SS6 491 aa13.35□□□□□ -0.27
PLOD3-216ENST00000489927 LRRC75AQ8NAA5 344 aa13.35□□□□□ -0.27
PLOD3-216ENST00000489927 ATP6V1G3Q96LB4 118 aa13.35□□□□□ -0.27
PLOD3-216ENST00000489927 ECSITQ9BQ95 431 aa13.35□□□□□ -0.27
PLOD3-216ENST00000489927 MRI1Q9BV20 369 aa13.35□□□□□ -0.27
PLOD3-216ENST00000489927 UNKLQ9H9P5 680 aaKnown RBP13.35□□□□□ -0.27
PLOD3-216ENST00000489927 EMC7Q9NPA0 242 aa13.35□□□□□ -0.27
PLOD3-216ENST00000489927 MAN2C1Q9NTJ4 1040 aa13.35□□□□□ -0.27
PLOD3-216ENST00000489927 TBCCD1Q9NVR7 557 aa13.35□□□□□ -0.27
PLOD3-216ENST00000489927 NDRG4Q9ULP0 352 aaKnown RBP13.35□□□□□ -0.27
PLOD3-216ENST00000489927 TRAV27A0A087WT01 109 aa13.34□□□□□ -0.27
PLOD3-216ENST00000489927 C12orf71A8MTZ7 269 aa13.34□□□□□ -0.27
PLOD3-216ENST00000489927 F5H0A9 414 aaPredicted RBP13.34□□□□□ -0.27
PLOD3-216ENST00000489927 H7C1C5 153 aa13.34□□□□□ -0.27
PLOD3-216ENST00000489927 FXYD1O00168 92 aa13.34□□□□□ -0.27
PLOD3-216ENST00000489927 RNASE1P07998 156 aaKnown RBP13.34□□□□□ -0.27
PLOD3-216ENST00000489927 LCN6P62502 163 aa13.34□□□□□ -0.27
PLOD3-216ENST00000489927 CYBRD1Q53TN4 286 aa13.34□□□□□ -0.27
PLOD3-216ENST00000489927 TTMPQ5BVD1 217 aa13.34□□□□□ -0.27
PLOD3-216ENST00000489927 FAM205BPQ63HN1 556 aa13.34□□□□□ -0.27
PLOD3-216ENST00000489927 MICU2Q8IYU8 434 aa13.34□□□□□ -0.27
PLOD3-216ENST00000489927 NPEPL1Q8NDH3 523 aa13.34□□□□□ -0.27
PLOD3-216ENST00000489927 OR51A7Q8NH64 312 aa13.34□□□□□ -0.27
PLOD3-216ENST00000489927 ITLN1Q8WWA0 313 aa13.34□□□□□ -0.27
PLOD3-216ENST00000489927 TAF15Q92804 592 aaKnown RBP eCLIP13.34□□□□□ -0.27
PLOD3-216ENST00000489927 SLC25A28Q96A46 364 aa13.34□□□□□ -0.27
PLOD3-216ENST00000489927 CMBLQ96DG6 245 aa13.34□□□□□ -0.27
PLOD3-216ENST00000489927 SH3GL1Q99961 368 aa13.34□□□□□ -0.27
PLOD3-216ENST00000489927 POLE4Q9NR33 117 aa13.34□□□□□ -0.27
PLOD3-216ENST00000489927 IL19Q9UHD0 177 aa13.34□□□□□ -0.27
PLOD3-216ENST00000489927 A4GNTQ9UNA3 340 aa13.34□□□□□ -0.27
PLOD3-216ENST00000489927 PPP1R3CQ9UQK1 317 aa13.34□□□□□ -0.27
PLOD3-216ENST00000489927 A0A0G2JND7 137 aa13.33□□□□□ -0.28
PLOD3-216ENST00000489927 A6NIZ1 184 aa13.33□□□□□ -0.28
PLOD3-216ENST00000489927 IFNA14P01570 189 aa13.33□□□□□ -0.28
PLOD3-216ENST00000489927 COX5BP10606 129 aa13.33□□□□□ -0.28
PLOD3-216ENST00000489927 KITLGP21583 273 aa13.33□□□□□ -0.28
PLOD3-216ENST00000489927 TUBG1P23258 451 aa13.33□□□□□ -0.28
PLOD3-216ENST00000489927 HTR5AP47898 357 aa13.33□□□□□ -0.28
PLOD3-216ENST00000489927 ERFP50548 548 aa13.33□□□□□ -0.28
PLOD3-216ENST00000489927 RAP1BP61224 184 aa13.33□□□□□ -0.28
PLOD3-216ENST00000489927 RAP1AP62834 184 aa13.33□□□□□ -0.28
PLOD3-216ENST00000489927 ST3GAL3Q11203 375 aa13.33□□□□□ -0.28
PLOD3-216ENST00000489927 FHL1Q13642 323 aa13.33□□□□□ -0.28
PLOD3-216ENST00000489927 LRRC23Q53EV4 343 aaPredicted RBP13.33□□□□□ -0.28
PLOD3-216ENST00000489927 ESCO2Q56NI9 601 aa13.33□□□□□ -0.28
PLOD3-216ENST00000489927 TREML4Q6UXN2 200 aa13.33□□□□□ -0.28
PLOD3-216ENST00000489927 NRMQ8IXM6 262 aa13.33□□□□□ -0.28
PLOD3-216ENST00000489927 OR8J3Q8NGG0 315 aa13.33□□□□□ -0.28
PLOD3-216ENST00000489927 PRRC1Q96M27 445 aa13.33□□□□□ -0.28
PLOD3-216ENST00000489927 ZNF583Q96ND8 569 aa13.33□□□□□ -0.28
PLOD3-216ENST00000489927 OR2V2Q96R30 315 aa13.33□□□□□ -0.28
PLOD3-216ENST00000489927 MS4A7Q9GZW8 240 aaPredicted RBP13.33□□□□□ -0.28
PLOD3-216ENST00000489927 TUBG2Q9NRH3 451 aa13.33□□□□□ -0.28
PLOD3-216ENST00000489927 INTS9Q9NV88 658 aaKnown RBP13.33□□□□□ -0.28
PLOD3-216ENST00000489927 OR5V1Q9UGF6 321 aa13.33□□□□□ -0.28
PLOD3-216ENST00000489927 STARD10Q9Y365 291 aa13.33□□□□□ -0.28
PLOD3-216ENST00000489927 SOX21Q9Y651 276 aaPredicted RBP13.33□□□□□ -0.28
PLOD3-216ENST00000489927 IGHV3OR16-10A0A075B7F0 116 aa13.32□□□□□ -0.28
PLOD3-216ENST00000489927 HTR3EA5X5Y0 456 aa13.32□□□□□ -0.28
PLOD3-216ENST00000489927 CEACAM18A8MTB9 384 aa13.32□□□□□ -0.28
PLOD3-216ENST00000489927 TMEM178BH3BS89 294 aa13.32□□□□□ -0.28
PLOD3-216ENST00000489927 CLDN34H7C241 214 aa13.32□□□□□ -0.28
PLOD3-216ENST00000489927 DOK2O60496 412 aa13.32□□□□□ -0.28
PLOD3-216ENST00000489927 IGHV4-38-2P0DP08 117 aa13.32□□□□□ -0.28
PLOD3-216ENST00000489927 CD80P33681 288 aa13.32□□□□□ -0.28
PLOD3-216ENST00000489927 MDH2P40926 338 aaKnown RBP13.32□□□□□ -0.28
PLOD3-216ENST00000489927 MMP16P51512 607 aa13.32□□□□□ -0.28
PLOD3-216ENST00000489927 IL13RA1P78552 427 aa13.32□□□□□ -0.28
PLOD3-216ENST00000489927 PAX8Q06710 450 aa13.32□□□□□ -0.28
PLOD3-216ENST00000489927 SCRN3Q0VDG4 424 aa13.32□□□□□ -0.28
PLOD3-216ENST00000489927 SLC9A3R2Q15599 337 aa13.32□□□□□ -0.28
PLOD3-216ENST00000489927 ERICH5Q6P6B1 374 aa13.32□□□□□ -0.28
PLOD3-216ENST00000489927 OAFQ86UD1 273 aa13.32□□□□□ -0.28
PLOD3-216ENST00000489927 JAZF1Q86VZ6 243 aa13.32□□□□□ -0.28
PLOD3-216ENST00000489927 OR52E2Q8NGJ4 325 aa13.32□□□□□ -0.28
PLOD3-216ENST00000489927 OR13C2Q8NGS9 318 aa13.32□□□□□ -0.28
PLOD3-216ENST00000489927 C10orf82Q8WW14 230 aa13.32□□□□□ -0.28
PLOD3-216ENST00000489927 HAVCR1Q96D42 359 aa13.32□□□□□ -0.28
PLOD3-216ENST00000489927 TPD52L3Q96J77 140 aa13.32□□□□□ -0.28
PLOD3-216ENST00000489927 MAGEB18Q96M61 343 aa13.32□□□□□ -0.28
PLOD3-216ENST00000489927 WACQ9BTA9 647 aa13.32□□□□□ -0.28
PLOD3-216ENST00000489927 GCM1Q9NP62 436 aa13.32□□□□□ -0.28
PLOD3-216ENST00000489927 RHCGQ9UBD6 479 aa13.32□□□□□ -0.28
PLOD3-216ENST00000489927 POM121CA8CG34 1229 aa13.31□□□□□ -0.28
PLOD3-216ENST00000489927 EFCAB9A8MZ26 197 aa13.31□□□□□ -0.28
PLOD3-216ENST00000489927 SURF4O15260 269 aa13.31□□□□□ -0.28
PLOD3-216ENST00000489927 SGCEO43556 437 aa13.31□□□□□ -0.28
PLOD3-216ENST00000489927 WNT2P09544 360 aa13.31□□□□□ -0.28
PLOD3-216ENST00000489927 KDELR2P33947 212 aa13.31□□□□□ -0.28
PLOD3-216ENST00000489927 YAP1P46937 504 aaKnown RBP13.31□□□□□ -0.28
PLOD3-216ENST00000489927 GUCY1A3Q02108 690 aa13.31□□□□□ -0.28
PLOD3-216ENST00000489927 PAX2Q02962 417 aa13.31□□□□□ -0.28
PLOD3-216ENST00000489927 PRKCDQ05655 676 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms