RNA–Protein interactions for RNA: ENST00000489676.1

TFF3-203, Transcript of trefoil factor 3, humanhuman

TSL 2

Gene TFF3, Length 419 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-203ENST00000489676 OR4F15Q8NGB8 312 aa9.5□□□□□ -0.89
TFF3-203ENST00000489676 OR52I1Q8NGK6 324 aa9.5□□□□□ -0.89
TFF3-203ENST00000489676 OR52N5Q8NH56 324 aa9.5□□□□□ -0.89
TFF3-203ENST00000489676 OTOSQ8NHW6 89 aa9.5□□□□□ -0.89
TFF3-203ENST00000489676 SMAP2Q8WU79 429 aaPredicted RBP9.5□□□□□ -0.89
TFF3-203ENST00000489676 NANOS1Q8WY41 292 aaKnown RBP9.5□□□□□ -0.89
TFF3-203ENST00000489676 LRRC46Q96FV0 321 aa9.5□□□□□ -0.89
TFF3-203ENST00000489676 AMELYQ99218 206 aa9.5□□□□□ -0.89
TFF3-203ENST00000489676 ZNF649Q9BS31 505 aa9.5□□□□□ -0.89
TFF3-203ENST00000489676 JAM3Q9BX67 310 aa9.5□□□□□ -0.89
TFF3-203ENST00000489676 OR2H1Q9GZK4 316 aa9.5□□□□□ -0.89
TFF3-203ENST00000489676 YIPF3Q9GZM5 350 aa9.5□□□□□ -0.89
TFF3-203ENST00000489676 WNT5BQ9H1J7 359 aa9.5□□□□□ -0.89
TFF3-203ENST00000489676 FGF20Q9NP95 211 aaPredicted RBP9.5□□□□□ -0.89
TFF3-203ENST00000489676 PAK1IP1Q9NWT1 392 aaPredicted RBP9.5□□□□□ -0.89
TFF3-203ENST00000489676 NPAP1Q9NZP6 1156 aa9.5□□□□□ -0.89
TFF3-203ENST00000489676 GDF2Q9UK05 429 aaPredicted RBP9.5□□□□□ -0.89
TFF3-203ENST00000489676 COPS3Q9UNS2 423 aa9.5□□□□□ -0.89
TFF3-203ENST00000489676 LRCH1Q9Y2L9 728 aa9.5□□□□□ -0.89
TFF3-203ENST00000489676 RPL36Q9Y3U8 105 aaKnown RBP9.5□□□□□ -0.89
TFF3-203ENST00000489676 KLF2Q9Y5W3 355 aaPredicted RBP9.5□□□□□ -0.89
TFF3-203ENST00000489676 UNC79Q9P2D8 2635 aa9.5□□□□□ -0.89
TFF3-203ENST00000489676 OR6C6A6NF89 314 aa9.49□□□□□ -0.89
TFF3-203ENST00000489676 ZNF593O00488 134 aaPredicted RBP9.49□□□□□ -0.89
TFF3-203ENST00000489676 RER1O15258 196 aa9.49□□□□□ -0.89
TFF3-203ENST00000489676 SPARCP09486 303 aa9.49□□□□□ -0.89
TFF3-203ENST00000489676 ZNF823P16415 610 aa9.49□□□□□ -0.89
TFF3-203ENST00000489676 ZNF14P17017 642 aaPredicted RBP9.49□□□□□ -0.89
TFF3-203ENST00000489676 ALOX5APP20292 161 aa9.49□□□□□ -0.89
TFF3-203ENST00000489676 CRHBPP24387 322 aa9.49□□□□□ -0.89
TFF3-203ENST00000489676 HOXC12P31275 282 aa9.49□□□□□ -0.89
TFF3-203ENST00000489676 UBE2NP61088 152 aaKnown RBP9.49□□□□□ -0.89
TFF3-203ENST00000489676 SLC35A2P78381 396 aa9.49□□□□□ -0.89
TFF3-203ENST00000489676 PSG4Q00888 419 aa9.49□□□□□ -0.89
TFF3-203ENST00000489676 SCRN3Q0VDG4 424 aa9.49□□□□□ -0.89
TFF3-203ENST00000489676 MED21Q13503 144 aa9.49□□□□□ -0.89
TFF3-203ENST00000489676 PPA1Q15181 289 aa9.49□□□□□ -0.89
TFF3-203ENST00000489676 GSG1Q2KHT4 349 aa9.49□□□□□ -0.89
TFF3-203ENST00000489676 SLC36A2Q495M3 483 aa9.49□□□□□ -0.89
TFF3-203ENST00000489676 CCDC92Q53HC0 331 aaPredicted RBP9.49□□□□□ -0.89
TFF3-203ENST00000489676 VASH1Q7L8A9 365 aaPredicted RBP9.49□□□□□ -0.89
TFF3-203ENST00000489676 SSX8Q7RTT4 187 aa9.49□□□□□ -0.89
TFF3-203ENST00000489676 SSX6Q7RTT6 188 aa9.49□□□□□ -0.89
TFF3-203ENST00000489676 MDP1Q86V88 176 aa9.49□□□□□ -0.89
TFF3-203ENST00000489676 ZNF584Q8IVC4 421 aa9.49□□□□□ -0.89
TFF3-203ENST00000489676 SLC35F2Q8IXU6 374 aa9.49□□□□□ -0.89
TFF3-203ENST00000489676 ZNF454Q8N9F8 522 aa9.49□□□□□ -0.89
TFF3-203ENST00000489676 BPIFB6Q8NFQ5 453 aa9.49□□□□□ -0.89
TFF3-203ENST00000489676 HSD17B8Q92506 261 aa9.49□□□□□ -0.89
TFF3-203ENST00000489676 SGCDQ92629 289 aa9.49□□□□□ -0.89
TFF3-203ENST00000489676 GGHQ92820 318 aa9.49□□□□□ -0.89
TFF3-203ENST00000489676 WFIKKN1Q96NZ8 548 aa9.49□□□□□ -0.89
TFF3-203ENST00000489676 MNTQ99583 582 aa9.49□□□□□ -0.89
TFF3-203ENST00000489676 ABHD6Q9BV23 337 aa9.49□□□□□ -0.89
TFF3-203ENST00000489676 DUSP21Q9H596 190 aa9.49□□□□□ -0.89
TFF3-203ENST00000489676 DDX28Q9NUL7 540 aaKnown RBP9.49□□□□□ -0.89
TFF3-203ENST00000489676 CNOT2Q9NZN8 540 aaKnown RBP9.49□□□□□ -0.89
TFF3-203ENST00000489676 ATPIF1Q9UII2 106 aa9.49□□□□□ -0.89
TFF3-203ENST00000489676 MYRFQ9Y2G1 1151 aa9.49□□□□□ -0.89
TFF3-203ENST00000489676 POLR1DQ9Y2S0 133 aa9.49□□□□□ -0.89
TFF3-203ENST00000489676 CRYBG3Q68DQ2 2970 aa9.49□□□□□ -0.89
TFF3-203ENST00000489676 ICE1Q9Y2F5 2266 aa9.48□□□□□ -0.89
TFF3-203ENST00000489676 EFCAB10A6NFE3 127 aa9.48□□□□□ -0.89
TFF3-203ENST00000489676 TRIM64A6NGJ6 449 aa9.48□□□□□ -0.89
TFF3-203ENST00000489676 SYNGR3O43761 229 aa9.48□□□□□ -0.89
TFF3-203ENST00000489676 FAM20BO75063 409 aa9.48□□□□□ -0.89
TFF3-203ENST00000489676 CLDN1O95832 211 aa9.48□□□□□ -0.89
TFF3-203ENST00000489676 CELA3BP08861 270 aa9.48□□□□□ -0.89
TFF3-203ENST00000489676 HTR1AP08908 422 aa9.48□□□□□ -0.89
TFF3-203ENST00000489676 CBR1P16152 277 aa9.48□□□□□ -0.89
TFF3-203ENST00000489676 CRYGSP22914 178 aa9.48□□□□□ -0.89
TFF3-203ENST00000489676 ARR3P36575 388 aa9.48□□□□□ -0.89
TFF3-203ENST00000489676 HCCSP53701 268 aa9.48□□□□□ -0.89
TFF3-203ENST00000489676 PCBD1P61457 104 aa9.48□□□□□ -0.89
TFF3-203ENST00000489676 RAB1AP62820 205 aa9.48□□□□□ -0.89
TFF3-203ENST00000489676 CSNK2BP67870 215 aa9.48□□□□□ -0.89
TFF3-203ENST00000489676 ACTC1P68032 377 aa9.48□□□□□ -0.89
TFF3-203ENST00000489676 ACTA1P68133 377 aa9.48□□□□□ -0.89
TFF3-203ENST00000489676 ROM1Q03395 351 aa9.48□□□□□ -0.89
TFF3-203ENST00000489676 MVKQ03426 396 aa9.48□□□□□ -0.89
TFF3-203ENST00000489676 ZNF85Q03923 595 aa9.48□□□□□ -0.89
TFF3-203ENST00000489676 SNTB1Q13884 538 aaKnown RBP9.48□□□□□ -0.89
TFF3-203ENST00000489676 RAB35Q15286 201 aa9.48□□□□□ -0.89
TFF3-203ENST00000489676 KRTAP27-1Q3LI81 207 aa9.48□□□□□ -0.89
TFF3-203ENST00000489676 C3orf36Q3SXR2 165 aa9.48□□□□□ -0.89
TFF3-203ENST00000489676 PABPC1L2AQ5JQF8 200 aa9.48□□□□□ -0.89
TFF3-203ENST00000489676 RBM48Q5RL73 367 aaKnown RBP9.48□□□□□ -0.89
TFF3-203ENST00000489676 ZNF684Q5T5D7 378 aa9.48□□□□□ -0.89
TFF3-203ENST00000489676 ZNF774Q6NX45 483 aa9.48□□□□□ -0.89
TFF3-203ENST00000489676 DCXRQ7Z4W1 244 aa9.48□□□□□ -0.89
TFF3-203ENST00000489676 DMRTC2Q8IXT2 367 aaPredicted RBP9.48□□□□□ -0.89
TFF3-203ENST00000489676 ZNF786Q8N393 782 aa9.48□□□□□ -0.89
TFF3-203ENST00000489676 CPEB3Q8NE35 698 aaKnown RBP9.48□□□□□ -0.89
TFF3-203ENST00000489676 GJC3Q8NFK1 279 aa9.48□□□□□ -0.89
TFF3-203ENST00000489676 AKR7LQ8NHP1 331 aa9.48□□□□□ -0.89
TFF3-203ENST00000489676 RNF133Q8WVZ7 376 aa9.48□□□□□ -0.89
TFF3-203ENST00000489676 MS4A3Q96HJ5 214 aa9.48□□□□□ -0.89
TFF3-203ENST00000489676 MOV10Q9HCE1 1003 aaKnown RBP9.48□□□□□ -0.89
TFF3-203ENST00000489676 CCNB1IP1Q9NPC3 277 aa9.48□□□□□ -0.89
TFF3-203ENST00000489676 DIMT1Q9UNQ2 313 aaKnown RBP9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms