RNA–Protein interactions for RNA: ENST00000489417.5

SND1-214, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 1,447 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-214ENST00000489417 ZNF813Q6ZN06 617 aa18.35■□□□□ 0.53
SND1-214ENST00000489417 DOLPP1Q86YN1 238 aa18.35■□□□□ 0.53
SND1-214ENST00000489417 LRRC18Q8N456 261 aa18.35■□□□□ 0.53
SND1-214ENST00000489417 SLC22A24Q8N4F4 322 aa18.35■□□□□ 0.53
SND1-214ENST00000489417 ZFP3Q96NJ6 502 aa18.35■□□□□ 0.53
SND1-214ENST00000489417 DOK1Q99704 481 aa18.35■□□□□ 0.53
SND1-214ENST00000489417 CENPMQ9NSP4 180 aa18.35■□□□□ 0.53
SND1-214ENST00000489417 OGG1O15527 345 aa18.34■□□□□ 0.53
SND1-214ENST00000489417 ZNF254O75437 659 aa18.34■□□□□ 0.53
SND1-214ENST00000489417 TOXO94900 526 aa18.34■□□□□ 0.53
SND1-214ENST00000489417 RPP14O95059 124 aaKnown RBP18.34■□□□□ 0.53
SND1-214ENST00000489417 IL2RAP01589 272 aa18.34■□□□□ 0.53
SND1-214ENST00000489417 TMIGD3P0DMS9 266 aaPredicted RBP18.34■□□□□ 0.53
SND1-214ENST00000489417 NR4A1P22736 598 aa18.34■□□□□ 0.53
SND1-214ENST00000489417 TGM4P49221 684 aa18.34■□□□□ 0.53
SND1-214ENST00000489417 RIDAP52758 137 aaKnown RBP18.34■□□□□ 0.53
SND1-214ENST00000489417 FOXG1P55316 489 aaPredicted RBP18.34■□□□□ 0.53
SND1-214ENST00000489417 FOXF2Q12947 444 aa18.34■□□□□ 0.53
SND1-214ENST00000489417 CDK5R1Q15078 307 aa18.34■□□□□ 0.53
SND1-214ENST00000489417 CCDC58Q4VC31 144 aa18.34■□□□□ 0.53
SND1-214ENST00000489417 C9orf135Q5VTT2 229 aa18.34■□□□□ 0.53
SND1-214ENST00000489417 DMKNQ6E0U4 476 aaPredicted RBP18.34■□□□□ 0.53
SND1-214ENST00000489417 RPL22L1Q6P5R6 122 aaKnown RBP18.34■□□□□ 0.53
SND1-214ENST00000489417 DEGS2Q6QHC5 323 aa18.34■□□□□ 0.53
SND1-214ENST00000489417 ARL9Q6T311 187 aa18.34■□□□□ 0.53
SND1-214ENST00000489417 KLHL24Q6TFL4 600 aa18.34■□□□□ 0.53
SND1-214ENST00000489417 C3P1Q6ZMU1 363 aa18.34■□□□□ 0.53
SND1-214ENST00000489417 RPRMLQ8N4K4 120 aa18.34■□□□□ 0.53
SND1-214ENST00000489417 OR10S1Q8NGN2 331 aa18.34■□□□□ 0.53
SND1-214ENST00000489417 C12orf43Q96C57 262 aaKnown RBP18.34■□□□□ 0.53
SND1-214ENST00000489417 WBP1Q96G27 269 aa18.34■□□□□ 0.53
SND1-214ENST00000489417 SH3GL3Q99963 347 aa18.34■□□□□ 0.53
SND1-214ENST00000489417 BCL7BQ9BQE9 202 aa18.34■□□□□ 0.53
SND1-214ENST00000489417 LRP12Q9Y561 859 aa18.34■□□□□ 0.53
SND1-214ENST00000489417 ATMQ13315 3056 aa18.34■□□□□ 0.53
SND1-214ENST00000489417 AIREO43918 545 aa18.33■□□□□ 0.53
SND1-214ENST00000489417 FARS2O95363 451 aaKnown RBP18.33■□□□□ 0.53
SND1-214ENST00000489417 H2BFMP0C1H6 154 aa18.33■□□□□ 0.53
SND1-214ENST00000489417 MPGP29372 298 aa18.33■□□□□ 0.53
SND1-214ENST00000489417 OPRL1P41146 370 aa18.33■□□□□ 0.53
SND1-214ENST00000489417 RPS25P62851 125 aaKnown RBP18.33■□□□□ 0.53
SND1-214ENST00000489417 HIST1H3AP68431 136 aa18.33■□□□□ 0.53
SND1-214ENST00000489417 TIMM50Q3ZCQ8 353 aa18.33■□□□□ 0.53
SND1-214ENST00000489417 HIST2H3PS2Q5TEC6 136 aa18.33■□□□□ 0.53
SND1-214ENST00000489417 OR7E24Q6IFN5 339 aa18.33■□□□□ 0.53
SND1-214ENST00000489417 VWA1Q6PCB0 445 aa18.33■□□□□ 0.53
SND1-214ENST00000489417 HIST2H3AQ71DI3 136 aa18.33■□□□□ 0.53
SND1-214ENST00000489417 ZNF627Q7L945 461 aa18.33■□□□□ 0.53
SND1-214ENST00000489417 GJC3Q8NFK1 279 aa18.33■□□□□ 0.53
SND1-214ENST00000489417 RPL3LQ92901 407 aaKnown RBP18.33■□□□□ 0.53
SND1-214ENST00000489417 RNF166Q96A37 237 aaPredicted RBP18.33■□□□□ 0.53
SND1-214ENST00000489417 FBXO17Q96EF6 278 aa18.33■□□□□ 0.53
SND1-214ENST00000489417 OR51E2Q9H255 320 aa18.33■□□□□ 0.53
SND1-214ENST00000489417 SF3B6Q9Y3B4 125 aaKnown RBP18.33■□□□□ 0.53
SND1-214ENST00000489417 PIEZO2Q9H5I5 2752 aa18.33■□□□□ 0.52
SND1-214ENST00000489417 ZNF878C9JN71 531 aa18.32■□□□□ 0.52
SND1-214ENST00000489417 H3BMQ9 156 aa18.32■□□□□ 0.52
SND1-214ENST00000489417 RER1O15258 196 aa18.32■□□□□ 0.52
SND1-214ENST00000489417 PLPP2O43688 288 aa18.32■□□□□ 0.52
SND1-214ENST00000489417 TNFSF13O75888 250 aa18.32■□□□□ 0.52
SND1-214ENST00000489417 GLI4P10075 376 aa18.32■□□□□ 0.52
SND1-214ENST00000489417 PSMA1P25786 263 aaKnown RBP18.32■□□□□ 0.52
SND1-214ENST00000489417 GABRA5P31644 462 aa18.32■□□□□ 0.52
SND1-214ENST00000489417 CEACAM8P31997 349 aaPredicted RBP18.32■□□□□ 0.52
SND1-214ENST00000489417 SH3BGRP55822 239 aaPredicted RBP18.32■□□□□ 0.52
SND1-214ENST00000489417 CTF1Q16619 201 aa18.32■□□□□ 0.52
SND1-214ENST00000489417 STUB1Q9UNE7 303 aa18.32■□□□□ 0.52
SND1-214ENST00000489417 MED12LQ86YW9 2145 aa18.32■□□□□ 0.52
SND1-214ENST00000489417 LRRTM2O43300 516 aa18.32■□□□□ 0.52
SND1-214ENST00000489417 CNOT4O95628 575 aaKnown RBP18.32■□□□□ 0.52
SND1-214ENST00000489417 CD53P19397 219 aa18.32■□□□□ 0.52
SND1-214ENST00000489417 SLC3A1Q07837 685 aa18.32■□□□□ 0.52
SND1-214ENST00000489417 RHOUQ7L0Q8 258 aa18.32■□□□□ 0.52
SND1-214ENST00000489417 SLC16A14Q7RTX9 510 aa18.32■□□□□ 0.52
SND1-214ENST00000489417 BTLAQ7Z6A9 289 aa18.32■□□□□ 0.52
SND1-214ENST00000489417 HIST2H2ABQ8IUE6 130 aaPredicted RBP18.32■□□□□ 0.52
SND1-214ENST00000489417 SKA3Q8IX90 412 aa18.32■□□□□ 0.52
SND1-214ENST00000489417 RPS4Y2Q8TD47 263 aa18.32■□□□□ 0.52
SND1-214ENST00000489417 SMIM19Q96E16 107 aa18.32■□□□□ 0.52
SND1-214ENST00000489417 CHCHD6Q9BRQ6 235 aa18.32■□□□□ 0.52
SND1-214ENST00000489417 WACQ9BTA9 647 aa18.32■□□□□ 0.52
SND1-214ENST00000489417 KCNN2Q9H2S1 579 aa18.32■□□□□ 0.52
SND1-214ENST00000489417 PNRC2Q9NPJ4 139 aaKnown RBP18.32■□□□□ 0.52
SND1-214ENST00000489417 PLSCR4Q9NRQ2 329 aa18.32■□□□□ 0.52
SND1-214ENST00000489417 TINAGQ9UJW2 476 aa18.32■□□□□ 0.52
SND1-214ENST00000489417 PROCRQ9UNN8 238 aa18.32■□□□□ 0.52
SND1-214ENST00000489417 TRBV2A0A0J9YWF9 115 aa18.31■□□□□ 0.52
SND1-214ENST00000489417 GPX5O75715 221 aa18.31■□□□□ 0.52
SND1-214ENST00000489417 CD1AP06126 327 aa18.31■□□□□ 0.52
SND1-214ENST00000489417 ITGA5P08648 1049 aa18.31■□□□□ 0.52
SND1-214ENST00000489417 CRYBB2P43320 205 aa18.31■□□□□ 0.52
SND1-214ENST00000489417 GDI2P50395 445 aaKnown RBP18.31■□□□□ 0.52
SND1-214ENST00000489417 NANOS3P60323 173 aaKnown RBP18.31■□□□□ 0.52
SND1-214ENST00000489417 PCBD1P61457 104 aa18.31■□□□□ 0.52
SND1-214ENST00000489417 LSM3P62310 102 aaKnown RBP18.31■□□□□ 0.52
SND1-214ENST00000489417 SCRN3Q0VDG4 424 aa18.31■□□□□ 0.52
SND1-214ENST00000489417 ALKBH1Q13686 389 aaKnown RBP18.31■□□□□ 0.52
SND1-214ENST00000489417 TAF13Q15543 124 aa18.31■□□□□ 0.52
SND1-214ENST00000489417 CNPY1Q3B7I2 92 aa18.31■□□□□ 0.52
SND1-214ENST00000489417 CCDC92Q53HC0 331 aaPredicted RBP18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms