RNA–Protein interactions for RNA: ENST00000489028.1

RFC4-213, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-213ENST00000489028 TDGF1P13385 188 aa1.98□□□□□ -2.09
RFC4-213ENST00000489028 ZNF250P15622 560 aa1.98□□□□□ -2.09
RFC4-213ENST00000489028 BTCP35070 178 aa1.98□□□□□ -2.09
RFC4-213ENST00000489028 LONP1P36776 959 aaKnown RBP1.98□□□□□ -2.09
RFC4-213ENST00000489028 BCAP31P51572 246 aa1.98□□□□□ -2.09
RFC4-213ENST00000489028 TDGF1P3P51864 188 aa1.98□□□□□ -2.09
RFC4-213ENST00000489028 TCP10Q12799 353 aa1.98□□□□□ -2.09
RFC4-213ENST00000489028 FZD2Q14332 565 aa1.98□□□□□ -2.09
RFC4-213ENST00000489028 STK38Q15208 465 aa1.98□□□□□ -2.09
RFC4-213ENST00000489028 RFX4Q33E94 735 aa1.98□□□□□ -2.09
RFC4-213ENST00000489028 ZBED5Q49AG3 693 aa1.98□□□□□ -2.09
RFC4-213ENST00000489028 NKAIN1Q4KMZ8 207 aa1.98□□□□□ -2.09
RFC4-213ENST00000489028 PIGGQ5H8A4 983 aa1.98□□□□□ -2.09
RFC4-213ENST00000489028 CT45A1Q5HYN5 189 aa1.98□□□□□ -2.09
RFC4-213ENST00000489028 CCNJQ5T5M9 372 aa1.98□□□□□ -2.09
RFC4-213ENST00000489028 LCN12Q6JVE5 192 aa1.98□□□□□ -2.09
RFC4-213ENST00000489028 HDDC2Q7Z4H3 204 aa1.98□□□□□ -2.09
RFC4-213ENST00000489028 ABHD12BQ7Z5M8 362 aaPredicted RBP1.98□□□□□ -2.09
RFC4-213ENST00000489028 TMEM150AQ86TG1 271 aa1.98□□□□□ -2.09
RFC4-213ENST00000489028 THOC6Q86W42 341 aaKnown RBP1.98□□□□□ -2.09
RFC4-213ENST00000489028 PRELID2Q8N945 189 aa1.98□□□□□ -2.09
RFC4-213ENST00000489028 C8orf31Q8N9H6 132 aa1.98□□□□□ -2.09
RFC4-213ENST00000489028 HSD17B11Q8NBQ5 300 aa1.98□□□□□ -2.09
RFC4-213ENST00000489028 INO80EQ8NBZ0 244 aaPredicted RBP1.98□□□□□ -2.09
RFC4-213ENST00000489028 PROKR2Q8NFJ6 384 aa1.98□□□□□ -2.09
RFC4-213ENST00000489028 OR2A1Q8NGT9 310 aa1.98□□□□□ -2.09
RFC4-213ENST00000489028 OR6X1Q8NH79 312 aa1.98□□□□□ -2.09
RFC4-213ENST00000489028 OR5K2Q8NHB8 316 aa1.98□□□□□ -2.09
RFC4-213ENST00000489028 CT45A3Q8NHU0 189 aa1.98□□□□□ -2.09
RFC4-213ENST00000489028 DTX3LQ8TDB6 740 aa1.98□□□□□ -2.09
RFC4-213ENST00000489028 MCOLN3Q8TDD5 553 aa1.98□□□□□ -2.09
RFC4-213ENST00000489028 ACER1Q8TDN7 264 aa1.98□□□□□ -2.09
RFC4-213ENST00000489028 ECHDC3Q96DC8 303 aa1.98□□□□□ -2.09
RFC4-213ENST00000489028 C9orf72Q96LT7 481 aa1.98□□□□□ -2.09
RFC4-213ENST00000489028 SERPINB12Q96P63 405 aa1.98□□□□□ -2.09
RFC4-213ENST00000489028 UCK2Q9BZX2 261 aa1.98□□□□□ -2.09
RFC4-213ENST00000489028 CLMPQ9H6B4 373 aa1.98□□□□□ -2.09
RFC4-213ENST00000489028 RPF2Q9H7B2 306 aaKnown RBP1.98□□□□□ -2.09
RFC4-213ENST00000489028 DMAP1Q9NPF5 467 aaPredicted RBP1.98□□□□□ -2.09
RFC4-213ENST00000489028 LZTFL1Q9NQ48 299 aa1.98□□□□□ -2.09
RFC4-213ENST00000489028 ZC4H2Q9NQZ6 224 aa1.98□□□□□ -2.09
RFC4-213ENST00000489028 CTPS2Q9NRF8 586 aa1.98□□□□□ -2.09
RFC4-213ENST00000489028 PDS5BQ9NTI5 1447 aa1.98□□□□□ -2.09
RFC4-213ENST00000489028 MROH7-TTC4A0A0A0MT08 1334 aa1.97□□□□□ -2.09
RFC4-213ENST00000489028 MAPK8IP3Q9UPT6 1336 aa1.97□□□□□ -2.09
RFC4-213ENST00000489028 IGKV1D-13A0A0B4J2D9 117 aa1.97□□□□□ -2.09
RFC4-213ENST00000489028 TMEM120BA0PK00 339 aa1.97□□□□□ -2.09
RFC4-213ENST00000489028 SERPINE3A8MV23 424 aa1.97□□□□□ -2.09
RFC4-213ENST00000489028 FAM25EA8MYX2 175 aa1.97□□□□□ -2.09
RFC4-213ENST00000489028 LAD1O00515 517 aa1.97□□□□□ -2.09
RFC4-213ENST00000489028 SPOPO43791 374 aa1.97□□□□□ -2.09
RFC4-213ENST00000489028 HSBP1O75506 76 aa1.97□□□□□ -2.09
RFC4-213ENST00000489028 FCN3O75636 299 aa1.97□□□□□ -2.09
RFC4-213ENST00000489028 LSM8O95777 96 aaKnown RBP1.97□□□□□ -2.09
RFC4-213ENST00000489028 AIFM1O95831 613 aa1.97□□□□□ -2.09
RFC4-213ENST00000489028 IFNW1P05000 195 aa1.97□□□□□ -2.09
RFC4-213ENST00000489028 S100A9P06702 114 aaKnown RBP1.97□□□□□ -2.09
RFC4-213ENST00000489028 SERPINE2P07093 398 aa1.97□□□□□ -2.09
RFC4-213ENST00000489028 PNMA6AP0CW24 399 aaPredicted RBP1.97□□□□□ -2.09
RFC4-213ENST00000489028 SMIM10L1P0DMW3 83 aa1.97□□□□□ -2.09
RFC4-213ENST00000489028 IGHV3-43DP0DP04 118 aa1.97□□□□□ -2.09
RFC4-213ENST00000489028 IGKV1-13P0DP09 117 aa1.97□□□□□ -2.09
RFC4-213ENST00000489028 F2RP25116 425 aa1.97□□□□□ -2.09
RFC4-213ENST00000489028 CD82P27701 267 aa1.97□□□□□ -2.09
RFC4-213ENST00000489028 SLC1A2P43004 574 aa1.97□□□□□ -2.09
RFC4-213ENST00000489028 CRISP1P54107 249 aa1.97□□□□□ -2.09
RFC4-213ENST00000489028 NUTF2P61970 127 aaKnown RBP1.97□□□□□ -2.09
RFC4-213ENST00000489028 RPS21P63220 83 aaKnown RBP1.97□□□□□ -2.09
RFC4-213ENST00000489028 IRX3P78415 501 aaPredicted RBP1.97□□□□□ -2.09
RFC4-213ENST00000489028 SP4Q02446 784 aa1.97□□□□□ -2.09
RFC4-213ENST00000489028 IRF8Q02556 426 aa1.97□□□□□ -2.09
RFC4-213ENST00000489028 SLC25A11Q02978 314 aaKnown RBP1.97□□□□□ -2.09
RFC4-213ENST00000489028 SMARCB1Q12824 385 aa1.97□□□□□ -2.09
RFC4-213ENST00000489028 OR7A5Q15622 319 aa1.97□□□□□ -2.09
RFC4-213ENST00000489028 SGCAQ16586 387 aa1.97□□□□□ -2.09
RFC4-213ENST00000489028 FAM83EQ2M2I3 478 aa1.97□□□□□ -2.09
RFC4-213ENST00000489028 ANKRD22Q5VYY1 191 aa1.97□□□□□ -2.09
RFC4-213ENST00000489028 FRMPD2BQ6IN97 320 aa1.97□□□□□ -2.09
RFC4-213ENST00000489028 H3F3CQ6NXT2 135 aa1.97□□□□□ -2.09
RFC4-213ENST00000489028 CAMK2N1Q7Z7J9 78 aa1.97□□□□□ -2.09
RFC4-213ENST00000489028 LINC00523Q86TU6 105 aa1.97□□□□□ -2.09
RFC4-213ENST00000489028 OAFQ86UD1 273 aa1.97□□□□□ -2.09
RFC4-213ENST00000489028 C12orf56Q8IXR9 622 aa1.97□□□□□ -2.09
RFC4-213ENST00000489028 MREGQ8N565 214 aa1.97□□□□□ -2.09
RFC4-213ENST00000489028 OR5T3Q8NGG3 340 aa1.97□□□□□ -2.09
RFC4-213ENST00000489028 CERS2Q96G23 380 aa1.97□□□□□ -2.09
RFC4-213ENST00000489028 DUS3LQ96G46 650 aaKnown RBP1.97□□□□□ -2.09
RFC4-213ENST00000489028 AURKBQ96GD4 344 aaPredicted RBP1.97□□□□□ -2.09
RFC4-213ENST00000489028 SMIM10Q96HG1 83 aa1.97□□□□□ -2.09
RFC4-213ENST00000489028 TSSK3Q96PN8 268 aa1.97□□□□□ -2.09
RFC4-213ENST00000489028 OR5B12Q96R08 314 aa1.97□□□□□ -2.09
RFC4-213ENST00000489028 GABARAPL3Q9BY60 117 aa1.97□□□□□ -2.09
RFC4-213ENST00000489028 SLC7A5P2Q9GIP4 190 aa1.97□□□□□ -2.09
RFC4-213ENST00000489028 NEUROG2Q9H2A3 272 aa1.97□□□□□ -2.09
RFC4-213ENST00000489028 PIGUQ9H490 435 aa1.97□□□□□ -2.09
RFC4-213ENST00000489028 C8orf33Q9H7E9 229 aaPredicted RBP1.97□□□□□ -2.09
RFC4-213ENST00000489028 UGT1A7Q9HAW7 530 aa1.97□□□□□ -2.09
RFC4-213ENST00000489028 UGT1A8Q9HAW9 530 aa1.97□□□□□ -2.09
RFC4-213ENST00000489028 RETNQ9HD89 108 aa1.97□□□□□ -2.09
RFC4-213ENST00000489028 KCNJ16Q9NPI9 418 aa1.97□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms