RNA–Protein interactions for RNA: ENST00000488927.2

HDAC7-224, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 739 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-224ENST00000488927 PLEK2Q9NYT0 353 aa13.85□□□□□ -0.19
HDAC7-224ENST00000488927 NKX1-2Q9UD57 310 aaPredicted RBP13.85□□□□□ -0.19
HDAC7-224ENST00000488927 LHFPL6Q9Y693 200 aa13.85□□□□□ -0.19
HDAC7-224ENST00000488927 COMMD3-BMI1R4GMX3 469 aa13.85□□□□□ -0.19
HDAC7-224ENST00000488927 LOC100130705A0A1B0GUX0 176 aa13.84□□□□□ -0.19
HDAC7-224ENST00000488927 TVP23AA6NH52 213 aa13.84□□□□□ -0.19
HDAC7-224ENST00000488927 SLC22A31A6NKX4 558 aa13.84□□□□□ -0.19
HDAC7-224ENST00000488927 VSTM5A8MXK1 200 aa13.84□□□□□ -0.19
HDAC7-224ENST00000488927 ATP6V1G2-DDX39BF2Z307 99 aa13.84□□□□□ -0.19
HDAC7-224ENST00000488927 HS3ST1O14792 307 aa13.84□□□□□ -0.19
HDAC7-224ENST00000488927 DOK2O60496 412 aa13.84□□□□□ -0.19
HDAC7-224ENST00000488927 ZNF35P13682 527 aa13.84□□□□□ -0.19
HDAC7-224ENST00000488927 SLC2A5P22732 501 aa13.84□□□□□ -0.19
HDAC7-224ENST00000488927 GDI2P50395 445 aaKnown RBP13.84□□□□□ -0.19
HDAC7-224ENST00000488927 HIST1H3AP68431 136 aa13.84□□□□□ -0.19
HDAC7-224ENST00000488927 ECH1Q13011 328 aa13.84□□□□□ -0.19
HDAC7-224ENST00000488927 APOFQ13790 326 aa13.84□□□□□ -0.19
HDAC7-224ENST00000488927 RAB35Q15286 201 aa13.84□□□□□ -0.19
HDAC7-224ENST00000488927 PCK2Q16822 640 aa13.84□□□□□ -0.19
HDAC7-224ENST00000488927 HIST2H3PS2Q5TEC6 136 aa13.84□□□□□ -0.19
HDAC7-224ENST00000488927 AADACL4Q5VUY2 407 aa13.84□□□□□ -0.19
HDAC7-224ENST00000488927 TTC23Q5W5X9 447 aa13.84□□□□□ -0.19
HDAC7-224ENST00000488927 SLC18B1Q6NT16 456 aa13.84□□□□□ -0.19
HDAC7-224ENST00000488927 ZNF774Q6NX45 483 aa13.84□□□□□ -0.19
HDAC7-224ENST00000488927 ARL9Q6T311 187 aa13.84□□□□□ -0.19
HDAC7-224ENST00000488927 C20orf204Q6ZNR8 217 aa13.84□□□□□ -0.19
HDAC7-224ENST00000488927 HIST2H3AQ71DI3 136 aa13.84□□□□□ -0.19
HDAC7-224ENST00000488927 SHFQ7M4L6 423 aa13.84□□□□□ -0.19
HDAC7-224ENST00000488927 MYPOPQ86VE0 399 aaPredicted RBP13.84□□□□□ -0.19
HDAC7-224ENST00000488927 ZNF511Q8NB15 262 aa13.84□□□□□ -0.19
HDAC7-224ENST00000488927 CPEB3Q8NE35 698 aaKnown RBP13.84□□□□□ -0.19
HDAC7-224ENST00000488927 NUP37Q8NFH4 326 aa13.84□□□□□ -0.19
HDAC7-224ENST00000488927 KBTBD8Q8NFY9 601 aa13.84□□□□□ -0.19
HDAC7-224ENST00000488927 AKR7LQ8NHP1 331 aa13.84□□□□□ -0.19
HDAC7-224ENST00000488927 ZNRF4Q8WWF5 429 aa13.84□□□□□ -0.19
HDAC7-224ENST00000488927 AKAP1Q92667 903 aaKnown RBP eCLIP13.84□□□□□ -0.19
HDAC7-224ENST00000488927 RFKQ969G6 155 aa13.84□□□□□ -0.19
HDAC7-224ENST00000488927 FBXW5Q969U6 566 aa13.84□□□□□ -0.19
HDAC7-224ENST00000488927 IL4I1Q96RQ9 567 aa13.84□□□□□ -0.19
HDAC7-224ENST00000488927 TEAD3Q99594 435 aa13.84□□□□□ -0.19
HDAC7-224ENST00000488927 APOL4Q9BPW4 351 aa13.84□□□□□ -0.19
HDAC7-224ENST00000488927 CISD1Q9NZ45 108 aaKnown RBP13.84□□□□□ -0.19
HDAC7-224ENST00000488927 RRP15Q9Y3B9 282 aaKnown RBP13.84□□□□□ -0.19
HDAC7-224ENST00000488927 ATP23Q9Y6H3 246 aa13.84□□□□□ -0.19
HDAC7-224ENST00000488927 DCHS2Q6V1P9 2916 aa13.84□□□□□ -0.19
HDAC7-224ENST00000488927 A0A1W2PPR1 153 aa13.83□□□□□ -0.2
HDAC7-224ENST00000488927 SNTNA6NMZ2 147 aa13.83□□□□□ -0.2
HDAC7-224ENST00000488927 ZNF593O00488 134 aaPredicted RBP13.83□□□□□ -0.2
HDAC7-224ENST00000488927 RER1O15258 196 aa13.83□□□□□ -0.2
HDAC7-224ENST00000488927 PLAUP00749 431 aa13.83□□□□□ -0.2
HDAC7-224ENST00000488927 APEX1P27695 318 aaKnown RBP13.83□□□□□ -0.2
HDAC7-224ENST00000488927 CALCRP30988 508 aa13.83□□□□□ -0.2
HDAC7-224ENST00000488927 HTR5AP47898 357 aa13.83□□□□□ -0.2
HDAC7-224ENST00000488927 SNRPGP62308 76 aaKnown RBP13.83□□□□□ -0.2
HDAC7-224ENST00000488927 SPOCK1Q08629 439 aa13.83□□□□□ -0.2
HDAC7-224ENST00000488927 DBPQ10586 325 aaPredicted RBP13.83□□□□□ -0.2
HDAC7-224ENST00000488927 TMED1Q13445 227 aa13.83□□□□□ -0.2
HDAC7-224ENST00000488927 ELFN2Q5R3F8 820 aa13.83□□□□□ -0.2
HDAC7-224ENST00000488927 SLC25A30Q5SVS4 291 aa13.83□□□□□ -0.2
HDAC7-224ENST00000488927 MEDAGQ5VYS4 303 aa13.83□□□□□ -0.2
HDAC7-224ENST00000488927 ZNF544Q6NX49 715 aa13.83□□□□□ -0.2
HDAC7-224ENST00000488927 MEPCEQ7L2J0 689 aaKnown RBP13.83□□□□□ -0.2
HDAC7-224ENST00000488927 VASH1Q7L8A9 365 aaPredicted RBP13.83□□□□□ -0.2
HDAC7-224ENST00000488927 ERI1Q8IV48 349 aaKnown RBP13.83□□□□□ -0.2
HDAC7-224ENST00000488927 C1orf174Q8IYL3 243 aa13.83□□□□□ -0.2
HDAC7-224ENST00000488927 ZNF611Q8N823 705 aa13.83□□□□□ -0.2
HDAC7-224ENST00000488927 BBS1Q8NFJ9 593 aa13.83□□□□□ -0.2
HDAC7-224ENST00000488927 ZMYND19Q96E35 227 aaPredicted RBP13.83□□□□□ -0.2
HDAC7-224ENST00000488927 COQ7Q99807 217 aa13.83□□□□□ -0.2
HDAC7-224ENST00000488927 WDR76Q9H967 626 aa13.83□□□□□ -0.2
HDAC7-224ENST00000488927 UBTD1Q9HAC8 227 aa13.83□□□□□ -0.2
HDAC7-224ENST00000488927 EIF3KQ9UBQ5 218 aaKnown RBP13.83□□□□□ -0.2
HDAC7-224ENST00000488927 GDF2Q9UK05 429 aaPredicted RBP13.83□□□□□ -0.2
HDAC7-224ENST00000488927 OR6C6A6NF89 314 aa13.82□□□□□ -0.2
HDAC7-224ENST00000488927 H0YJX3 145 aa13.82□□□□□ -0.2
HDAC7-224ENST00000488927 DLGAP1O14490 977 aa13.82□□□□□ -0.2
HDAC7-224ENST00000488927 SYNGR3O43761 229 aa13.82□□□□□ -0.2
HDAC7-224ENST00000488927 ATP6V1G2O95670 118 aa13.82□□□□□ -0.2
HDAC7-224ENST00000488927 SPARCP09486 303 aa13.82□□□□□ -0.2
HDAC7-224ENST00000488927 NR4A1P22736 598 aa13.82□□□□□ -0.2
HDAC7-224ENST00000488927 PCSK6P29122 969 aa13.82□□□□□ -0.2
HDAC7-224ENST00000488927 RAD52P43351 418 aa13.82□□□□□ -0.2
HDAC7-224ENST00000488927 RPS23P62266 143 aaKnown RBP13.82□□□□□ -0.2
HDAC7-224ENST00000488927 GGTLC2Q14390 218 aa13.82□□□□□ -0.2
HDAC7-224ENST00000488927 CCDC92Q53HC0 331 aaPredicted RBP13.82□□□□□ -0.2
HDAC7-224ENST00000488927 LINC00346Q8IVM7 164 aa13.82□□□□□ -0.2
HDAC7-224ENST00000488927 TIGD4Q8IY51 512 aa13.82□□□□□ -0.2
HDAC7-224ENST00000488927 DHRSXQ8N5I4 330 aa13.82□□□□□ -0.2
HDAC7-224ENST00000488927 ZNF454Q8N9F8 522 aa13.82□□□□□ -0.2
HDAC7-224ENST00000488927 OR6N2Q8NGY6 317 aa13.82□□□□□ -0.2
HDAC7-224ENST00000488927 OR1F12Q8NHA8 337 aa13.82□□□□□ -0.2
HDAC7-224ENST00000488927 LILRB1Q8NHL6 650 aaPredicted RBP13.82□□□□□ -0.2
HDAC7-224ENST00000488927 POM121L2Q96KW2 1035 aa13.82□□□□□ -0.2
HDAC7-224ENST00000488927 LURAP1Q96LR2 239 aa13.82□□□□□ -0.2
HDAC7-224ENST00000488927 DCLRE1CQ96SD1 692 aaKnown RBP13.82□□□□□ -0.2
HDAC7-224ENST00000488927 DHRS9Q9BPW9 319 aa13.82□□□□□ -0.2
HDAC7-224ENST00000488927 BCL2L14Q9BZR8 327 aa13.82□□□□□ -0.2
HDAC7-224ENST00000488927 HAO2Q9NYQ3 351 aa13.82□□□□□ -0.2
HDAC7-224ENST00000488927 WARS2Q9UGM6 360 aaKnown RBP13.82□□□□□ -0.2
HDAC7-224ENST00000488927 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.82□□□□□ -0.25e-6■■■■□ 20.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms