RNA–Protein interactions for RNA: ENST00000488737.6

ABCB1-207, Transcript of ATP binding cassette subfamily B member 1, humanhuman

TSL 1 (best)

Gene ABCB1, Length 1,864 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCB1-207ENST00000488737 CSRP2Q16527 193 aa12.73□□□□□ -0.37
ABCB1-207ENST00000488737 WDR45BQ5MNZ6 344 aa12.73□□□□□ -0.37
ABCB1-207ENST00000488737 C1orf100Q5SVJ3 147 aa12.73□□□□□ -0.37
ABCB1-207ENST00000488737 ADGRE4PQ86SQ3 457 aa12.73□□□□□ -0.37
ABCB1-207ENST00000488737 CCDC28AQ8IWP9 274 aa12.73□□□□□ -0.37
ABCB1-207ENST00000488737 TMEM229BQ8NBD8 167 aa12.73□□□□□ -0.37
ABCB1-207ENST00000488737 OR13C3Q8NGS6 347 aa12.73□□□□□ -0.37
ABCB1-207ENST00000488737 PPP1R14AQ96A00 147 aa12.73□□□□□ -0.37
ABCB1-207ENST00000488737 FOXRED1Q96CU9 486 aaPredicted RBP12.73□□□□□ -0.37
ABCB1-207ENST00000488737 SHDQ96IW2 340 aa12.73□□□□□ -0.37
ABCB1-207ENST00000488737 CHIAQ9BZP6 476 aa12.73□□□□□ -0.37
ABCB1-207ENST00000488737 FOXQ1Q9C009 403 aa12.73□□□□□ -0.37
ABCB1-207ENST00000488737 SLC7A5P2Q9GIP4 190 aa12.73□□□□□ -0.37
ABCB1-207ENST00000488737 UPB1Q9UBR1 384 aa12.73□□□□□ -0.37
ABCB1-207ENST00000488737 PISDQ9UG56 409 aa12.73□□□□□ -0.37
ABCB1-207ENST00000488737 OR52A1Q9UKL2 312 aa12.73□□□□□ -0.37
ABCB1-207ENST00000488737 EMC9Q9Y3B6 208 aa12.73□□□□□ -0.37
ABCB1-207ENST00000488737 IGHV3-20A0A0C4DH32 117 aa12.72□□□□□ -0.37
ABCB1-207ENST00000488737 LOC107986453A0A1B0GWG9 222 aa12.72□□□□□ -0.37
ABCB1-207ENST00000488737 A0A1W2PNV4 684 aa12.72□□□□□ -0.37
ABCB1-207ENST00000488737 OR6C65A6NJZ3 312 aa12.72□□□□□ -0.37
ABCB1-207ENST00000488737 LDLRAD4O15165 306 aa12.72□□□□□ -0.37
ABCB1-207ENST00000488737 RAD1O60671 282 aa12.72□□□□□ -0.37
ABCB1-207ENST00000488737 HEXBP07686 556 aa12.72□□□□□ -0.37
ABCB1-207ENST00000488737 PNLIPP16233 465 aa12.72□□□□□ -0.37
ABCB1-207ENST00000488737 IL11P20809 199 aa12.72□□□□□ -0.37
ABCB1-207ENST00000488737 MSX1P28360 303 aa12.72□□□□□ -0.37
ABCB1-207ENST00000488737 HSF1Q00613 529 aa12.72□□□□□ -0.37
ABCB1-207ENST00000488737 GUCA2AQ02747 115 aa12.72□□□□□ -0.37
ABCB1-207ENST00000488737 SQSTM1Q13501 440 aa12.72□□□□□ -0.37
ABCB1-207ENST00000488737 OPCMLQ14982 345 aa12.72□□□□□ -0.37
ABCB1-207ENST00000488737 MPPED2Q15777 294 aa12.72□□□□□ -0.37
ABCB1-207ENST00000488737 GRK1Q15835 563 aa12.72□□□□□ -0.37
ABCB1-207ENST00000488737 SLC25A53Q5H9E4 307 aa12.72□□□□□ -0.37
ABCB1-207ENST00000488737 STEAP1BQ6NZ63 245 aa12.72□□□□□ -0.37
ABCB1-207ENST00000488737 TMEM71Q6P5X7 295 aa12.72□□□□□ -0.37
ABCB1-207ENST00000488737 SHISA6Q6ZSJ9 500 aa12.72□□□□□ -0.37
ABCB1-207ENST00000488737 DCXRQ7Z4W1 244 aa12.72□□□□□ -0.37
ABCB1-207ENST00000488737 MDGA2Q7Z553 956 aa12.72□□□□□ -0.37
ABCB1-207ENST00000488737 BPHLQ86WA6 291 aaPredicted RBP12.72□□□□□ -0.37
ABCB1-207ENST00000488737 PNPLA2Q96AD5 504 aa12.72□□□□□ -0.37
ABCB1-207ENST00000488737 RBP7Q96R05 134 aa12.72□□□□□ -0.37
ABCB1-207ENST00000488737 APMAPQ9HDC9 416 aa12.72□□□□□ -0.37
ABCB1-207ENST00000488737 ALKBH4Q9NXW9 302 aa12.72□□□□□ -0.37
ABCB1-207ENST00000488737 VSTM2BA6NLU5 285 aa12.72□□□□□ -0.37
ABCB1-207ENST00000488737 HMSDA8MTL9 139 aa12.72□□□□□ -0.37
ABCB1-207ENST00000488737 DOK2O60496 412 aa12.72□□□□□ -0.37
ABCB1-207ENST00000488737 ALOX12BO75342 701 aa12.72□□□□□ -0.37
ABCB1-207ENST00000488737 MPZL1O95297 269 aa12.72□□□□□ -0.37
ABCB1-207ENST00000488737 RAB6AP20340 208 aa12.72□□□□□ -0.37
ABCB1-207ENST00000488737 RAB14P61106 215 aa12.72□□□□□ -0.37
ABCB1-207ENST00000488737 TLE3Q04726 772 aa12.72□□□□□ -0.37
ABCB1-207ENST00000488737 NKAIN1Q4KMZ8 207 aa12.72□□□□□ -0.37
ABCB1-207ENST00000488737 GLYATL3Q5SZD4 288 aa12.72□□□□□ -0.37
ABCB1-207ENST00000488737 HDDC2Q7Z4H3 204 aa12.72□□□□□ -0.37
ABCB1-207ENST00000488737 GABRG1Q8N1C3 465 aa12.72□□□□□ -0.37
ABCB1-207ENST00000488737 OR51S1Q8NGJ8 323 aa12.72□□□□□ -0.37
ABCB1-207ENST00000488737 RNF133Q8WVZ7 376 aa12.72□□□□□ -0.37
ABCB1-207ENST00000488737 C17orf50Q8WW18 174 aa12.72□□□□□ -0.37
ABCB1-207ENST00000488737 ARL5BQ96KC2 179 aa12.72□□□□□ -0.37
ABCB1-207ENST00000488737 DUSP15Q9H1R2 295 aaPredicted RBP12.72□□□□□ -0.37
ABCB1-207ENST00000488737 KCNK15Q9H427 330 aa12.72□□□□□ -0.37
ABCB1-207ENST00000488737 KLHL13Q9P2N7 655 aa12.72□□□□□ -0.37
ABCB1-207ENST00000488737 B3GALT5Q9Y2C3 310 aa12.72□□□□□ -0.37
ABCB1-207ENST00000488737 LIPT2A6NK58 231 aa12.71□□□□□ -0.37
ABCB1-207ENST00000488737 L7N2F9 121 aa12.71□□□□□ -0.37
ABCB1-207ENST00000488737 SHOXO15266 292 aa12.71□□□□□ -0.37
ABCB1-207ENST00000488737 ZNF354AO60765 605 aaPredicted RBP12.71□□□□□ -0.37
ABCB1-207ENST00000488737 CD3DP04234 171 aa12.71□□□□□ -0.37
ABCB1-207ENST00000488737 RLN1P04808 185 aa12.71□□□□□ -0.37
ABCB1-207ENST00000488737 ITGB2P05107 769 aa12.71□□□□□ -0.37
ABCB1-207ENST00000488737 NFYAP23511 347 aaPredicted RBP12.71□□□□□ -0.37
ABCB1-207ENST00000488737 MMP16P51512 607 aa12.71□□□□□ -0.37
ABCB1-207ENST00000488737 POU3F1Q03052 451 aaPredicted RBP12.71□□□□□ -0.37
ABCB1-207ENST00000488737 FMODQ06828 376 aa12.71□□□□□ -0.37
ABCB1-207ENST00000488737 OR5M10Q6IEU7 315 aa12.71□□□□□ -0.37
ABCB1-207ENST00000488737 LYPD6Q86Y78 171 aa12.71□□□□□ -0.37
ABCB1-207ENST00000488737 KDM8Q8N371 416 aa12.71□□□□□ -0.37
ABCB1-207ENST00000488737 ADPRHL1Q8NDY3 354 aa12.71□□□□□ -0.37
ABCB1-207ENST00000488737 OR2AK2Q8NG84 335 aa12.71□□□□□ -0.37
ABCB1-207ENST00000488737 OR4D10Q8NGI6 311 aa12.71□□□□□ -0.37
ABCB1-207ENST00000488737 OR5L2Q8NGL0 311 aa12.71□□□□□ -0.37
ABCB1-207ENST00000488737 CCDC107Q8WV48 283 aa12.71□□□□□ -0.37
ABCB1-207ENST00000488737 SEH1LQ96EE3 360 aa12.71□□□□□ -0.37
ABCB1-207ENST00000488737 MRGPRX4Q96LA9 322 aa12.71□□□□□ -0.37
ABCB1-207ENST00000488737 C1orf198Q9H425 327 aa12.71□□□□□ -0.37
ABCB1-207ENST00000488737 MYOZ1Q9NP98 299 aaPredicted RBP12.71□□□□□ -0.37
ABCB1-207ENST00000488737 GLTPQ9NZD2 209 aa12.71□□□□□ -0.37
ABCB1-207ENST00000488737 OPN4Q9UHM6 478 aa12.71□□□□□ -0.37
ABCB1-207ENST00000488737 MRPS18BQ9Y676 258 aaKnown RBP12.71□□□□□ -0.37
ABCB1-207ENST00000488737 CABIN1Q9Y6J0 2220 aa12.7□□□□□ -0.38
ABCB1-207ENST00000488737 IGLV3-32A0A0A0MS00 114 aa12.7□□□□□ -0.38
ABCB1-207ENST00000488737 TMEM269A0A1B0GVZ9 245 aa12.7□□□□□ -0.38
ABCB1-207ENST00000488737 ONECUT2O95948 504 aa12.7□□□□□ -0.38
ABCB1-207ENST00000488737 H2BFMP0C1H6 154 aa12.7□□□□□ -0.38
ABCB1-207ENST00000488737 MYF5P13349 255 aa12.7□□□□□ -0.38
ABCB1-207ENST00000488737 FOXF1Q12946 379 aa12.7□□□□□ -0.38
ABCB1-207ENST00000488737 TOR2AQ5JU69 321 aa12.7□□□□□ -0.38
ABCB1-207ENST00000488737 C16orf47Q6ZP98 133 aaPredicted RBP12.7□□□□□ -0.38
ABCB1-207ENST00000488737 OR52B4Q8NGK2 314 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms