RNA–Protein interactions for RNA: ENST00000488463.5

COL9A2-208, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 5

Gene COL9A2, Length 1,005 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-208ENST00000488463 C11orf40Q8WZ69 217 aa12.17□□□□□ -0.46
COL9A2-208ENST00000488463 SLCO4A1Q96BD0 722 aa12.17□□□□□ -0.46
COL9A2-208ENST00000488463 IFT27Q9BW83 186 aa12.17□□□□□ -0.46
COL9A2-208ENST00000488463 RACGAP1Q9H0H5 632 aa12.17□□□□□ -0.46
COL9A2-208ENST00000488463 OR51B6Q9H340 312 aa12.17□□□□□ -0.46
COL9A2-208ENST00000488463 B9D1Q9UPM9 204 aa12.17□□□□□ -0.46
COL9A2-208ENST00000488463 POMPQ9Y244 141 aa12.17□□□□□ -0.46
COL9A2-208ENST00000488463 U3KQV3 271 aa12.17□□□□□ -0.46
COL9A2-208ENST00000488463 DHRS12A0PJE2 317 aa12.16□□□□□ -0.46
COL9A2-208ENST00000488463 C5orf49A4QMS7 147 aa12.16□□□□□ -0.46
COL9A2-208ENST00000488463 OR6C6A6NF89 314 aa12.16□□□□□ -0.46
COL9A2-208ENST00000488463 NGFP01138 241 aa12.16□□□□□ -0.46
COL9A2-208ENST00000488463 CSF3P09919 207 aa12.16□□□□□ -0.46
COL9A2-208ENST00000488463 COX5BP10606 129 aa12.16□□□□□ -0.46
COL9A2-208ENST00000488463 SLC25A16P16260 332 aa12.16□□□□□ -0.46
COL9A2-208ENST00000488463 GUCA1AP43080 201 aaPredicted RBP12.16□□□□□ -0.46
COL9A2-208ENST00000488463 RAD52P43351 418 aa12.16□□□□□ -0.46
COL9A2-208ENST00000488463 CCDC92Q53HC0 331 aaPredicted RBP12.16□□□□□ -0.46
COL9A2-208ENST00000488463 CLEC12AQ5QGZ9 265 aa12.16□□□□□ -0.46
COL9A2-208ENST00000488463 RGS7BPQ6MZT1 257 aaPredicted RBP12.16□□□□□ -0.46
COL9A2-208ENST00000488463 LEG1Q6P5S2 330 aa12.16□□□□□ -0.46
COL9A2-208ENST00000488463 CD300LDQ6UXZ3 194 aa12.16□□□□□ -0.46
COL9A2-208ENST00000488463 RFPL4BQ6ZWI9 263 aa12.16□□□□□ -0.46
COL9A2-208ENST00000488463 VASH1Q7L8A9 365 aaPredicted RBP12.16□□□□□ -0.46
COL9A2-208ENST00000488463 PAPD5Q8NDF8 572 aaKnown RBP12.16□□□□□ -0.46
COL9A2-208ENST00000488463 SLC26A10Q8NG04 563 aa12.16□□□□□ -0.46
COL9A2-208ENST00000488463 NEU4Q8WWR8 484 aaPredicted RBP12.16□□□□□ -0.46
COL9A2-208ENST00000488463 MARS2Q96GW9 593 aaKnown RBP12.16□□□□□ -0.46
COL9A2-208ENST00000488463 LRGUKQ96M69 825 aa12.16□□□□□ -0.46
COL9A2-208ENST00000488463 BCL2L14Q9BZR8 327 aa12.16□□□□□ -0.46
COL9A2-208ENST00000488463 RAB1BQ9H0U4 201 aa12.16□□□□□ -0.46
COL9A2-208ENST00000488463 REEP1Q9H902 201 aa12.16□□□□□ -0.46
COL9A2-208ENST00000488463 REV1Q9UBZ9 1251 aa12.16□□□□□ -0.46
COL9A2-208ENST00000488463 SAMHD1Q9Y3Z3 626 aaKnown RBP12.16□□□□□ -0.46
COL9A2-208ENST00000488463 FKBP7Q9Y680 259 aa12.16□□□□□ -0.46
COL9A2-208ENST00000488463 LHFPL6Q9Y693 200 aa12.16□□□□□ -0.46
COL9A2-208ENST00000488463 LOC390937A0A1W2PQ73 354 aa12.15□□□□□ -0.46
COL9A2-208ENST00000488463 M0R233 179 aa12.15□□□□□ -0.46
COL9A2-208ENST00000488463 NDUFS8O00217 210 aa12.15□□□□□ -0.46
COL9A2-208ENST00000488463 CIB2O75838 187 aa12.15□□□□□ -0.46
COL9A2-208ENST00000488463 IGHV3-13P01766 116 aa12.15□□□□□ -0.46
COL9A2-208ENST00000488463 TFP02787 698 aa12.15□□□□□ -0.46
COL9A2-208ENST00000488463 LCKP06239 509 aa12.15□□□□□ -0.46
COL9A2-208ENST00000488463 GIFP27352 417 aa12.15□□□□□ -0.46
COL9A2-208ENST00000488463 CRABP1P29762 137 aa12.15□□□□□ -0.46
COL9A2-208ENST00000488463 GDI2P50395 445 aaKnown RBP12.15□□□□□ -0.46
COL9A2-208ENST00000488463 PDLIM4P50479 330 aa12.15□□□□□ -0.46
COL9A2-208ENST00000488463 AQP6Q13520 282 aa12.15□□□□□ -0.46
COL9A2-208ENST00000488463 FLOT2Q14254 428 aa12.15□□□□□ -0.46
COL9A2-208ENST00000488463 GK3PQ14409 553 aa12.15□□□□□ -0.46
COL9A2-208ENST00000488463 MEP1BQ16820 701 aa12.15□□□□□ -0.46
COL9A2-208ENST00000488463 RSPO1Q2MKA7 263 aaPredicted RBP12.15□□□□□ -0.46
COL9A2-208ENST00000488463 ELFN2Q5R3F8 820 aa12.15□□□□□ -0.46
COL9A2-208ENST00000488463 SLC35F1Q5T1Q4 408 aa12.15□□□□□ -0.46
COL9A2-208ENST00000488463 C10orf67Q8IYJ2 551 aa12.15□□□□□ -0.46
COL9A2-208ENST00000488463 ALDH16A1Q8IZ83 802 aa12.15□□□□□ -0.46
COL9A2-208ENST00000488463 LNX2Q8N448 690 aa12.15□□□□□ -0.46
COL9A2-208ENST00000488463 SDR9C7Q8NEX9 313 aa12.15□□□□□ -0.46
COL9A2-208ENST00000488463 OR4Q3Q8NH05 313 aa12.15□□□□□ -0.46
COL9A2-208ENST00000488463 SYNPRQ8TBG9 265 aa12.15□□□□□ -0.46
COL9A2-208ENST00000488463 ZNRF4Q8WWF5 429 aa12.15□□□□□ -0.46
COL9A2-208ENST00000488463 NIPSNAP1Q9BPW8 284 aa12.15□□□□□ -0.46
COL9A2-208ENST00000488463 LRMDAQ9H2I8 198 aa12.15□□□□□ -0.46
COL9A2-208ENST00000488463 TPK1Q9H3S4 243 aa12.15□□□□□ -0.46
COL9A2-208ENST00000488463 MS4A5Q9H3V2 200 aa12.15□□□□□ -0.46
COL9A2-208ENST00000488463 FN3KQ9H479 309 aa12.15□□□□□ -0.46
COL9A2-208ENST00000488463 RERGLQ9H628 205 aa12.15□□□□□ -0.46
COL9A2-208ENST00000488463 SRA1Q9HD15 236 aaKnown RBP12.15□□□□□ -0.46
COL9A2-208ENST00000488463 DYNLRB1Q9NP97 96 aa12.15□□□□□ -0.46
COL9A2-208ENST00000488463 MYOZ1Q9NP98 299 aaPredicted RBP12.15□□□□□ -0.46
COL9A2-208ENST00000488463 RPRD1BQ9NQG5 326 aaKnown RBP12.15□□□□□ -0.46
COL9A2-208ENST00000488463 ASH2LQ9UBL3 628 aa12.15□□□□□ -0.46
COL9A2-208ENST00000488463 DUSP13Q9UII6 198 aa12.15□□□□□ -0.46
COL9A2-208ENST00000488463 ARRDC5A6NEK1 342 aa12.14□□□□□ -0.47
COL9A2-208ENST00000488463 SGCEO43556 437 aa12.14□□□□□ -0.47
COL9A2-208ENST00000488463 NCR1O76036 304 aa12.14□□□□□ -0.47
COL9A2-208ENST00000488463 CST1P01037 141 aa12.14□□□□□ -0.47
COL9A2-208ENST00000488463 HPXP02790 462 aa12.14□□□□□ -0.47
COL9A2-208ENST00000488463 NAT2P11245 290 aa12.14□□□□□ -0.47
COL9A2-208ENST00000488463 DAOP14920 347 aa12.14□□□□□ -0.47
COL9A2-208ENST00000488463 CCNOP22674 350 aa12.14□□□□□ -0.47
COL9A2-208ENST00000488463 MPV17P39210 176 aa12.14□□□□□ -0.47
COL9A2-208ENST00000488463 NR4A2P43354 598 aa12.14□□□□□ -0.47
COL9A2-208ENST00000488463 KLF3P57682 345 aaPredicted RBP12.14□□□□□ -0.47
COL9A2-208ENST00000488463 SCRN3Q0VDG4 424 aa12.14□□□□□ -0.47
COL9A2-208ENST00000488463 RIN1Q13671 783 aa12.14□□□□□ -0.47
COL9A2-208ENST00000488463 TMEM249Q2WGJ8 235 aa12.14□□□□□ -0.47
COL9A2-208ENST00000488463 MBNL2Q5VZF2 373 aaKnown RBP12.14□□□□□ -0.47
COL9A2-208ENST00000488463 RPL13AP3Q6NVV1 102 aa12.14□□□□□ -0.47
COL9A2-208ENST00000488463 ZNF786Q8N393 782 aa12.14□□□□□ -0.47
COL9A2-208ENST00000488463 OR10G2Q8NGC3 310 aa12.14□□□□□ -0.47
COL9A2-208ENST00000488463 OR52E2Q8NGJ4 325 aa12.14□□□□□ -0.47
COL9A2-208ENST00000488463 OR1J1Q8NGS3 322 aa12.14□□□□□ -0.47
COL9A2-208ENST00000488463 SLC7A6Q92536 515 aa12.14□□□□□ -0.47
COL9A2-208ENST00000488463 GTF3AQ92664 365 aaKnown RBP12.14□□□□□ -0.47
COL9A2-208ENST00000488463 NMNAT2Q9BZQ4 307 aa12.14□□□□□ -0.47
COL9A2-208ENST00000488463 POFUT1Q9H488 388 aa12.14□□□□□ -0.47
COL9A2-208ENST00000488463 NTN4Q9HB63 628 aa12.14□□□□□ -0.47
COL9A2-208ENST00000488463 MRPL22Q9NWU5 206 aaKnown RBP12.14□□□□□ -0.47
COL9A2-208ENST00000488463 TAAR3PQ9P1P4 343 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms